KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:22 2014 Check: 00 .. Name: ENSTTRP00000016604/1-511 Len: 594 Check: 5839 Weight: 1.00 Name: BACU001173/1-539 Len: 594 Check: 954 Weight: 1.00 Name: ENSP00000383611/1-520 Len: 594 Check: 8127 Weight: 1.00 Name: bmy_10031T0/1-545 Len: 594 Check: 6617 Weight: 1.00 Name: ENSBTAP00000006407/1-520 Len: 594 Check: 1546 Weight: 1.00 // 1 50 ENSTTRP00000016604/1-511 ---------- ---------- -----ATARA APGPAAPAAA AGTPA-SGGA BACU001173/1-539 MVFLTAQLWL RNRVTDRYWR VQEVLKHARH FRGRKNRCYR LAVRAVTRAF ENSP00000383611/1-520 ---------- ---------- -MAAAAAAAG AAGSAAPAAA AGAPG-SGGA bmy_10031T0/1-545 ---------- ---------M AAATATAGAG AQGPAPPAAA AGTPG-SGGT ENSBTAP00000006407/1-520 ---------- ---------- --MAAAAGAG APGSTAPAVP AGTPG-SGGT 51 100 ENSTTRP00000016604/1-511 APGSQGVLIG DRLYSGVLIT LENCLLPDDK LRFTPSMSSG LDTDTETDLR BACU001173/1-539 VQCTRARRLK KRNLRTLWIS RVTAASQEHG LKYPAFILNL IKCQVELNRK ENSP00000383611/1-520 PSGSQGVLIG DRLYSGVLIT LENCLLPDDK LRFTPSMSSG LDTDTETDLR bmy_10031T0/1-545 APGSQGVLIG DRLYSGVLIT LENCLLPDDK LRFTPSMSSG LDTDTETDLR ENSBTAP00000006407/1-520 APASQGVLIG DRLYSGVLIT LENCLLPDDK LRFTPSMSSG LDTDTETDLR 101 150 ENSTTRP00000016604/1-511 VVGCELI--- ---------- ---------- ------QAAG ILLRLPQVAM BACU001173/1-539 VLADLAIYEP KTFKSLAALA KRRRQEGFAA ALGDGKEPEG IFSRV--VAM ENSP00000383611/1-520 VVGCELI--- ---------- ---------- ------QAAG ILLRLPQVAM bmy_10031T0/1-545 VVGCELI--- ---------- ---------- ------QAAG ILLRLPQVAM ENSBTAP00000006407/1-520 VVGCELI--- ---------- ---------- ------QAAG ILLRLPQVAM 151 200 ENSTTRP00000016604/1-511 ATGQVLFQRF FYTKSFVKHS MEHVSMACVH LASKIEEAPR RIRDVINVFH BACU001173/1-539 ATGQVLFQRF FYTKSFVKHS MEHVSMACVH LASKIEEAPR RIRDVINVFH ENSP00000383611/1-520 ATGQVLFQRF FYTKSFVKHS MEHVSMACVH LASKIEEAPR RIRDVINVFH bmy_10031T0/1-545 ATGQVLFQRF FYTKSFVKHS MEHVSMACVH LASKIEEAPR RIRDVINVFH ENSBTAP00000006407/1-520 ATGQVLFQRF FYTKSFVKHS MEHVSMACVH LASKIEEAPR RIRDVINVFH 201 250 ENSTTRP00000016604/1-511 RLRHLREKKK PVPLLLDQDY VNLKNQIIKA ERRVLKELGF CVHVKHPHKX BACU001173/1-539 RLRHLREKKK PVPLLLDQDY VNLKNQIIKA ERRVLKELGF CVHVKHPHKI ENSP00000383611/1-520 RLRQLRDKKK PVPLLLDQDY VNLKNQIIKA ERRVLKELGF CVHVKHPHKI bmy_10031T0/1-545 RLRHLREKKK PVPLLLDQDY VNLKNQIIKA ERRVLKELGF CVHVKHPHKI ENSBTAP00000006407/1-520 RLRHLREKKK PVPLLLDQDY VNLKNQIIKA ERRVLKELGF CVHVKHPHKI 251 300 ENSTTRP00000016604/1-511 XXXXXXXXXX XXXXXXXXXX XNYMNDSLRT DVFVRFQPES IACACIYLAA BACU001173/1-539 IVMYLQVLEC ERNRHLVQTS WNYMNDSLRT DVFVRFQPES IACACIYLAA ENSP00000383611/1-520 IVMYLQVLEC ERNQHLVQTS WNYMNDSLRT DVFVRFQPES IACACIYLAA bmy_10031T0/1-545 IVMYLQVLEC ERNRHLVQTS WNYMNDSLRT DVFVRFQPES IACACIYLAA ENSBTAP00000006407/1-520 IVMYLQVLEC ERNQHLVQTS WNYMNDSLRT DVFVRFQPES IACACIYLAA 301 350 ENSTTRP00000016604/1-511 RTLEIPLPNR PHWFLLFG-T EEEIQEICLK ILQLXXXXXX XXXXXXXXXX BACU001173/1-539 RTLEIPLPNR PHWFLLFGAT EEEIQEICLK ILQLYTRKKV DLTHLEGEVE ENSP00000383611/1-520 RTLEIPLPNR PHWFLLFGAT EEEIQEICLK ILQLYARKKV DLTHLEGEVE bmy_10031T0/1-545 RTLEIPLPNR PHWFLLFGAT EEEIQEICLK ILQLYTRKKV DLTHLEGEVE ENSBTAP00000006407/1-520 RTLEIPLPNR PHWFLLFGAT EEEIQEICLK ILQLYTRKKV DLTHLESEVE 351 400 ENSTTRP00000016604/1-511 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU001173/1-539 KRRYALDEAK AQAKGLLPGG TQVLDSASRF SPAPKPAESP KEGQGDKPSP ENSP00000383611/1-520 KRKHAIEEAK AQARGLLPGG TQVLDGTSGF SPAPKLVESP KEGKGSKPSP bmy_10031T0/1-545 KRRYALDEAK AQAKGLLPGG TQVLDSASRF SPAPKPAESP KEGQGDKPSP ENSBTAP00000006407/1-520 KRRHALDEAK AQAKGLLPGS TQVLDSASRF SPAPKPVESP KEGKGNKPSP 401 450 ENSTTRP00000016604/1-511 XXXXXXXXXX XXXXXXXXXX XXXXLPRERE -RSRSGSHEQ YSRSSPLSKR BACU001173/1-539 LSVKNARRKV EGVKRAKADS PVNG------ ---------- ---------- ENSP00000383611/1-520 LSVKNTKRRL EGAKKAKADS PVNGLPKGRE SRSRSRSREQ SYSRSPSRSA bmy_10031T0/1-545 LSVKNARRKV EGVKRAKADS PVNGLPRGRG ARSRSGSHEQ SYSRSPSPSA ENSBTAP00000006407/1-520 LSVKNTKRKV EGVKKTKADS PVNGLPKEQG SRSRSGSHEQ SYSRSPSRSA 451 500 ENSTTRP00000016604/1-511 ---------- ---------- ------RKSD SGSTSGGSKS QSRSRSRSDS BACU001173/1-539 ---------- ---------- -------KSD SGSTSGGSKS QSRSRSRSDS ENSP00000383611/1-520 SPKR------ ---------- ------RKSD SGSTSGGSKS QSRSRSRSDS bmy_10031T0/1-545 SPKRRTVAPD PEVVGVGGHP PSGLLHRKSD SGSTSGGSKS QSRSRSRSDS ENSBTAP00000006407/1-520 SPKR------ ---------- ------RKSD SGSTSGGSKS QSRSRSRSDS 501 550 ENSTTRP00000016604/1-511 PPRQAHRGAP YKGSKVRSYR RSKDCKYSAQ KPHKSQSRSS SRSRSRSRER BACU001173/1-539 PPRQAHRGAP YKGSKVRSYR RSKDCKYSAQ KPHKSRSRSS SRSRSRSRER ENSP00000383611/1-520 PPRQAPRSAP YKGSEIRGSR KSKDCKYP-Q KPHKSRSRSS SRSRSRSRER bmy_10031T0/1-545 PPRQAHRGAP YKGSKVRSYR RSKDCKYSAQ KPHKSRSRSS SRSRSRSRER ENSBTAP00000006407/1-520 PPRQAHRGAP YKGSKVRSYR RSKDCKYSTQ KPHKSRSRSS SRSRSRSRER 551 600 ENSTTRP00000016604/1-511 ADNSGKYKKK SHYCRDQRRE RSRSYERAGH RYERDHPGHS RHRR BACU001173/1-539 ADNSGKYKKK SHYCRDQRRE RSRSYERAGH RYERDHPGHS RHRR ENSP00000383611/1-520 ADNPGKYKKK SHYYRDQRRE RSRSYERTGR RYERDHPGHS RHRR bmy_10031T0/1-545 ADNSGKYKKK SHYCRDQRRE RSRSYERAGH RYERDHPGHS RHRR ENSBTAP00000006407/1-520 ADTSGKYKKK SHYYREQRRE RSRSYERTGH RYERDHPGHS RHRR