KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:23 2014 Check: 00 .. Name: ENSTTRP00000004623/1-430 Len: 528 Check: 5586 Weight: 1.00 Name: ENSP00000419195/1-501 Len: 528 Check: 8628 Weight: 1.00 Name: ENSBTAP00000006413/1-504 Len: 528 Check: 3645 Weight: 1.00 Name: bmy_06024T0/1-528 Len: 528 Check: 3918 Weight: 1.00 Name: BACU002387/1-497 Len: 528 Check: 8845 Weight: 1.00 // 1 50 ENSTTRP00000004623/1-430 ---------- ---------- ---------- ---------- ---------- ENSP00000419195/1-501 MPFGCVTLGD KKNYNQPSEV TDRYDLGQVI KTEEFCEIFR AKDKTTGKLH ENSBTAP00000006413/1-504 MPFGCVTLGD KKNYNQPSEV TDRYDLGQVI KTEEFCEIFR AKDKTTGKLH bmy_06024T0/1-528 MPFGCVTLGD KKNYNQPSEV TDRYDLGQVI KTEEFCEIFR AKDKTTGKLH BACU002387/1-497 MPFGCVTLGD KKNYNQPSEV TDRYDLGQVI KTEEFCEIFR AKDKTTGKLH 51 100 ENSTTRP00000004623/1-430 ---------- ---------- ----KMVKHP NILQLVDVFV TRKEYFIFLE ENSP00000419195/1-501 TCKKFQKRDG RKVRKAAKNE IGILKMVKHP NILQLVDVFV TRKEYFIFLE ENSBTAP00000006413/1-504 TCKKFQKRDG RKVRKAAKNE IGILKMVKHP NILQLVDVFV TRKEYFIFLE bmy_06024T0/1-528 TCKKFQKRDG RKVRKAAKNE IGILKMVKHP NILQLVDVFV TRKEYFIFLE BACU002387/1-497 TCKKFQKRDG RKVRKAAKNE IGILKMVKHP NILQLVDVFV TRKEYFIFLE 101 150 ENSTTRP00000004623/1-430 LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN ENSP00000419195/1-501 LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN ENSBTAP00000006413/1-504 LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN bmy_06024T0/1-528 LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN BACU002387/1-497 LATGREVFDW ILDQGYYSER DTSNVVRQVL EAVAYLHSLK IVHRNLKLEN 151 200 ENSTTRP00000004623/1-430 LVYYNRLKNS KIVISDFHLA KLENGLIKEP CGTPEYL--- ---------- ENSP00000419195/1-501 LVYYNRLKNS KIVISDFHLA KLENGLIKEP CGTPEYL--- ---------- ENSBTAP00000006413/1-504 LVYYNRLKNS KIVISDFHLA KLENGLIKEP CGTPEYL--- ---------- bmy_06024T0/1-528 LVYYNRLKNS KIVISDFHLA KLENGLIKEP CGTPEYLGKQ GVGRGRAWPG BACU002387/1-497 LVYYNRLKNS KIVISDFHLA KLENGLIKEP ---------- ---------- 201 250 ENSTTRP00000004623/1-430 ---------- -APDVVGRQR YGRPVDCWAI GVIMYILXXX XXXXXXXXXX ENSP00000419195/1-501 ---------- -APEVVGRQR YGRPVDCWAI GVIMYILLSG NPPFYEEVEE ENSBTAP00000006413/1-504 ---------- -APEVVGRQR YGRPVDCWAI GVIMYILLSG NPPFYEEVEE bmy_06024T0/1-528 LILTSRWTLF AAPEVVGRQR YGRPVDCWAI GVIMYILLSG NPPFYEEVEE BACU002387/1-497 ---------- -SPEVVGRQR YGRPVDCWAI GVIMYILLSG NPPFYEEVEE 251 300 ENSTTRP00000004623/1-430 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXKDLVTRL MEVEQDQRIT ENSP00000419195/1-501 DDYENHDKNL FRKILAGDYE FDSPYWDDIS QAAKDLVTRL MEVEQDQRIT ENSBTAP00000006413/1-504 DDYENHDKNL FRKILAGDYE FDSPYWDDIS QAAKDLVTRL MEVEQDQRIT bmy_06024T0/1-528 DDYENHDKNL FRKILAGDYE FDSPYWDDIS QAAKDLVTRL MEVEQDQRIT BACU002387/1-497 DDYENHDKNL FRKILAGDYE FDSPYWDDIS QAAKDLVTRL MEVEQDQRIT 301 350 ENSTTRP00000004623/1-430 AEEAISHEWI SGNAASDKNI KDGVCAQIEK NFARAKWKKA VRVTTLMKRL ENSP00000419195/1-501 AEEAISHEWI SGNAASDKNI KDGVCAQIEK NFARAKWKKA VRVTTLMKRL ENSBTAP00000006413/1-504 AEEAISHEWI SGNAASDKNI KDGVCAQIEK NFARAKWKKA VRVTTLMKRL bmy_06024T0/1-528 AEEAISHEWI SGNAASDKNI KDGVCAQIEK NFARAKWKKA VRVTTLMKRL BACU002387/1-497 AEEAISHEWI SGNAASDKNI KDGVCAQIEK NFARAKWKKA VRVTTLMKRL 351 400 ENSTTRP00000004623/1-430 RAPEQSSTAA AQSAPATDTA TSGAAGGATA ASGAAPALGG SATPATVGGV ENSP00000419195/1-501 RAPEQSSTAA AQSASATDTA TPGAAGGATA AAASGAT--- SAPEGDAARA ENSBTAP00000006413/1-504 RAPEQSGTAA AQSAPGTDTA TPGAAGGATA ASAAASALGG SATPATAGDA bmy_06024T0/1-528 RAPEQSSTAA AQSAPATDTA TSGAAGGATA ASGAAPALGG SATPATAGDV BACU002387/1-497 RAPEQSSTAA AQSAPATDTA TSGAAGGATA ASGAAPALGG SATPATAGDV 401 450 ENSTTRP00000004623/1-430 TKSDNVAPAD RSATPATDGS ATPATDGSIT PATDGSITPA TDGSVTPATD ENSP00000419195/1-501 AKSDNVAPAD RSATPATDGS ATPATDGSVT PATDGSITPA TDGSVTPATD ENSBTAP00000006413/1-504 TKSENVAPAD RSATPATDGS TTPATDGSVT PATDGSITPA TDGSVTPATD bmy_06024T0/1-528 TKSDNVAPAD RSATPATDGS ATPATDGSIT PATDGSITPA TDGSVTPATD BACU002387/1-497 TKSDNVAPAD RSATPATDGS ATPATDGSIT PATDGSITPA TDGSVTPATD 451 500 ENSTTRP00000004623/1-430 RSVTPATDGR ATPAVEESTM PTTQSSATLA TKAAATPEPA LAQPDSTAPG ENSP00000419195/1-501 RSATPATDGR ATPATEESTV PTTQSSAMLA TKAAATPEPA MAQPDSTAPE ENSBTAP00000006413/1-504 RSVTPATDGR ATPGMEESTV PTTQSSATPA AKAVATPEPA LTQPDSTAPG bmy_06024T0/1-528 RSVTPATDGR ATPAVEESTV PTTQSSATPA TKAAATPEPA LAQPDSTAPG BACU002387/1-497 RSVTPATDGR ATPAVEESTV PTTQSSATPA TKAAATPEPA LAQPDSTAPG 501 550 ENSTTRP00000004623/1-430 GATGQAPPSS KGEEAAGSAQ ESRREETS ENSP00000419195/1-501 GATGQAPPSS KGEEAAGYAQ ESQREEAS ENSBTAP00000006413/1-504 GATGQAPPSS KGEEAAGCAQ ESRRVETS bmy_06024T0/1-528 GATGQAPPSS KGEEAAGSAQ ESRREETS BACU002387/1-497 GATGQAPPSS KGEEAAGSAQ ESRREETS