KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:24 2014 Check: 00 .. Name: ENSTTRP00000010469/1-853 Len: 868 Check: 7571 Weight: 1.00 Name: ENSP00000356899/1-855 Len: 868 Check: 1336 Weight: 1.00 Name: BACU014426/1-805 Len: 868 Check: 9478 Weight: 1.00 Name: ENSBTAP00000006422/1-855 Len: 868 Check: 2767 Weight: 1.00 Name: bmy_21119T0/1-833 Len: 868 Check: 2909 Weight: 1.00 // 1 50 ENSTTRP00000010469/1-853 MILIPRMPLV LLLLLPILSS AKAQVNPAIC RYPLGMSGGH IPDEDITASS ENSP00000356899/1-855 MILIPRMLLV LFLLLPILSS AKAQVNPAIC RYPLGMSGGQ IPDEDITASS BACU014426/1-805 ---------- ---------- -LVSLGSAIC RYPLGMSGGH IPDEDITASS ENSBTAP00000006422/1-855 MIPIPRMPLV LLLLLPILSS AKAQVNPAVC RYPLGMSGGH IPDEDITASS bmy_21119T0/1-833 ---------- ---------- ---------- -----MSGGH IPDEDITASS 51 100 ENSTTRP00000010469/1-853 QWSESTAAKY GRLDSEEGDG AWCPEIPVEP DDLKEFLQID LHTLHFITLV ENSP00000356899/1-855 QWSESTAAKY GRLDSEEGDG AWCPEIPVEP DDLKEFLQID LHTLHFITLV BACU014426/1-805 QWSESTAAKY GRLDSEEGDG AWCPEIPVEP DDLKEFLQID LHTLHFITLV ENSBTAP00000006422/1-855 QWSESTAARY GRLDSEEGDG AWCPEIPVEP DDLKEFLQID LHTLHFITLV bmy_21119T0/1-833 QWSESTAAKY GRLDSEEGDG AWCPEIPVEP DDLKEFLQID LHTLHFITLV 101 150 ENSTTRP00000010469/1-853 GTQGRHAGGH GIEFAPMYKI NYSRDGTRWI SWRNRHGKQV LDGNSNPYDI ENSP00000356899/1-855 GTQGRHAGGH GIEFAPMYKI NYSRDGTRWI SWRNRHGKQV LDGNSNPYDI BACU014426/1-805 GTQGRHAGGH GIEFAPMYKI NYSRDGTRWI SWRNRHGKQV LDGNSNPYDI ENSBTAP00000006422/1-855 GTQGRHAGGH GIEFAPMYKI NYSRDGTRWI SWRNRHGKQV LDGNSNPYDI bmy_21119T0/1-833 GTQGRHAGGH GIEFAPMYKI NYSRDGTRWI SWRNRHGKQV LDGNSNPYDI 151 200 ENSTTRP00000010469/1-853 FLKDLEPPIV ARFVRFIPVT DHSMNVCMRV ELYGCVWLDG LVSYNAPAGQ ENSP00000356899/1-855 FLKDLEPPIV ARFVRFIPVT DHSMNVCMRV ELYGCVWLDG LVSYNAPAGQ BACU014426/1-805 FLKDLEPPIV ARFVRFIPVT DHSMNVCMRV ELYGCVWLDG LVSYNAPAGQ ENSBTAP00000006422/1-855 FLKDLEPPIV ARFVRFIPVT DHSMNVCMRV ELYGCVWLDG LVSYSAPAGQ bmy_21119T0/1-833 FLKDLEPPIV ARFVRFIPVT DHSMNVCMRV ELYGCVWLDG LVSYNAPAGQ 201 250 ENSTTRP00000010469/1-853 QFVLPGGSII YLNDSVYDGA VGYSMTEGLG QLTDGVSGLD DFTQTHEYHV ENSP00000356899/1-855 QFVLPGGSII YLNDSVYDGA VGYSMTEGLG QLTDGVSGLD DFTQTHEYHV BACU014426/1-805 QFVLPGGSVI YLNDSVYDGA VGYSMTEGLG QLTDGVSGLD DFTQTHEYHV ENSBTAP00000006422/1-855 QFVLPGGSII YLNDSVYDGA VGYSMTEGLG QLTDGVSGLD DFTQTHEYHV bmy_21119T0/1-833 QFVLPGGSII YLNDSVYDGA VGYSMTEGLG QLTDGVSGLD DFTQTHEYHV 251 300 ENSTTRP00000010469/1-853 WPGYDYVGWR NESATNGYIE IMFEFDRIRN FTTMKVHCNN MFAKGVKIFK ENSP00000356899/1-855 WPGYDYVGWR NESATNGYIE IMFEFDRIRN FTTMKVHCNN MFAKGVKIFK BACU014426/1-805 WPGYDYVGWR NESATNGYIE IMFEFDRIRN FTTMKVHCNN MFAKGVKIFK ENSBTAP00000006422/1-855 WPGYDYVGWR NESATNGYIE IMFEFDRIRN FTTMKVHCNN MFAKGVKIFK bmy_21119T0/1-833 WPGYDYVGWR NESATNGYIE IMFEFDRIRN FTTMKVHCNN MFAKGVKIFK 301 350 ENSTTRP00000010469/1-853 EVQCYFRSEA NEWEPNAVSF PLVLDDVNPS ARFVTVPLHH RMASAIKCQY ENSP00000356899/1-855 EVQCYFRSEA SEWEPNAISF PLVLDDVNPS ARFVTVPLHH RMASAIKCQY BACU014426/1-805 EVQCYFRSEA NEWEPNAVSF PLVLDDVNPS ARFVTVPLHH RMASAIKCQY ENSBTAP00000006422/1-855 EVQCYFRSEA NEWEPNAVSF PLVLDDVNPS ARFVTVPLHH RMASAIKCQY bmy_21119T0/1-833 EVQCYFRSEA NEWEPNAVSF PLVLDDVNPS ARFVTVPLHH RMASAIKCQY 351 400 ENSTTRP00000010469/1-853 HFADTWMMFS EITFQSDAAM YNNSGALPTS PVAPTTYDPM LKVDDSNTRI ENSP00000356899/1-855 HFADTWMMFS EITFQSDAAM YNNSEALPTS PMAPTTYDPM LKVDDSNTRI BACU014426/1-805 HFADTWMMFS EITFQSDAAM YNNSGALPTS PVAPTTYDPM LKVDDSNTRI ENSBTAP00000006422/1-855 HFADTWMMFS EITFQSDAAM YNNSGALPTS PVAPTTYDPM LKVDDSNTRI bmy_21119T0/1-833 HFADTWMMFS EITFQSDAAM YNNSGALPTS PVAPTTYDPM LKVDDSNTRI 401 450 ENSTTRP00000010469/1-853 LIGCLVAIIF ILLAIIVIIL WRQFWQKMLE KASRRMLDDE MTVSLS--SE ENSP00000356899/1-855 LIGCLVAIIF ILLAIIVIIL WRQFWQKMLE KASRRMLDDE MTVSLSLPSD BACU014426/1-805 LIGCLVAIIF ILLAIIVIIL WRQFWQKMLE KASRRMLDDE MTVSLSLPSE ENSBTAP00000006422/1-855 LIGCLVAIIF ILLAIIVIIL WRQFWQKMLE KASRRMLDDE MTVSLSLPSE bmy_21119T0/1-833 LIGCLVAIIF ILLAIIVIIL WRQFWQKMLE KASRRMLDDE MTVSLSLPSE 451 500 ENSTTRP00000010469/1-853 SSMFNNNRSS SPSEQESNST YDRIFPLRPD YQEPSRLIRK LPEFAPGEEE ENSP00000356899/1-855 SSMFNNNRSS SPSEQGSNST YDRIFPLRPD YQEPSRLIRK LPEFAPGEEE BACU014426/1-805 SSMFNNNRSS SPSEQESNST YDRIFPLRPD YQEPSRLIRK LPEFAPGEEE ENSBTAP00000006422/1-855 SSMFNNNRSS SPSEQESNST YDRIFPLRPD YQEPSRLIRK LPEFAPGEEE bmy_21119T0/1-833 SSMFNNNRSS SPSEQESNST YDRIFPLRPD YQEPSRLIRK LPEFAPGEEE 501 550 ENSTTRP00000010469/1-853 SGCSGIVKPV QPSGPEGVPH YAEADIVNLQ GVTGGNTYSV PAITMDLLSG ENSP00000356899/1-855 SGCSGVVKPV QPSGPEGVPH YAEADIVNLQ GVTGGNTYSV PAVTMDLLSG BACU014426/1-805 SGCSGIVKPV QPSGPEGVPH YAEADIVNLQ GVTGGNTYSV PAITMDLLSG ENSBTAP00000006422/1-855 SGCSGVVKPV QPSGPEGVPH YAEADIVNLQ GVTGGNTYSV PAVTMDLLSG bmy_21119T0/1-833 SGCSGIVKPV QPSGPEGVPH YAEADIVNLQ GVTGGNTYSV PAITMDLLSG 551 600 ENSTTRP00000010469/1-853 KDVAVEEFPR KLLTFKEKLG EGQFGEVHLC EVEGMEKFKD KDFAVDVSAN ENSP00000356899/1-855 KDVAVEEFPR KLLTFKEKLG EGQFGEVHLC EVEGMEKFKD KDFALDVSAN BACU014426/1-805 KDVAVEEFPR KLLTFKEKLG EGQFGEVHLC EVEGMEKFKD KDFALDVSAN ENSBTAP00000006422/1-855 KDVAVEEFPR KLLTFKEKLG EGQFGEVHLC EVEGMEKFKD KDFALDVSAN bmy_21119T0/1-833 KDVAVEEFPR KLLTFKEKLG EGQFGEVHLC EVEGMEKFKD KDFALDVSAN 601 650 ENSTTRP00000010469/1-853 QPVLVAVKML RADANKNARN DFLKEIKIMS RLKDPNIIRL LAVCITDDPL ENSP00000356899/1-855 QPVLVAVKML RADANKNARN DFLKEIKIMS RLKDPNIIHL LAVCITDDPL BACU014426/1-805 QPVLVAVKML RADANKNARN DFLKEIKIMS RLKDPNIIRL LAVCITDDPL ENSBTAP00000006422/1-855 QPVLVAVKML RADANKNARN DFLKEIKIMS RLKDPNIIRL LAVCITEDPL bmy_21119T0/1-833 QPVLVAVKML RADANKNARN DFLKEIKIMS RLKDPNIIRL LAVCITDDPL 651 700 ENSTTRP00000010469/1-853 CMITEYMENG DLNQFLSRHE PPSSSFSNVP TVSYANLKFM ATQIASGMKY ENSP00000356899/1-855 CMITEYMENG DLNQFLSRHE PPNSSSSDVR TVSYTNLKFM ATQIASGMKY BACU014426/1-805 CMITEYMENG DLNQFLSRHE PPTSSFSNVP TVSYANLKFM ATQIASGMKY ENSBTAP00000006422/1-855 CMITEYMENG DLNQFLSRHE PPNSSSASVP TVSYANLKFM ATQIASGMKY bmy_21119T0/1-833 CMITEYMENG DLNQFLSRHE PPTSSFSNVP TVSYANLKFM ATQIASGMKY 701 750 ENSTTRP00000010469/1-853 LSSLNFVHRD LATRNCLVGK NYTIKIADFG MSRNLYSGDY YRIQGRAVLP ENSP00000356899/1-855 LSSLNFVHRD LATRNCLVGK NYTIKIADFG MSRNLYSGDY YRIQGRAVLP BACU014426/1-805 LSSLNFVHRD LATRNCLVGK NYTIKIADFG MSRNLYSGDY YRIQGRAVLP ENSBTAP00000006422/1-855 LSSLNFVHRD LATRNCLVGK NYTIKIADFG MSRNLYSGDY YRIQGRAVLP bmy_21119T0/1-833 LSSLNFVHRD LATRNCLVGK NYTIKIADFG MSRNLYSGDY YRIQGRAVLP 751 800 ENSTTRP00000010469/1-853 IRWMSWESIL LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000356899/1-855 IRWMSWESIL LGKFTTASDV WAFGVTLWET FTFCQEQPYS QLSDEQVIEN BACU014426/1-805 IRWMSWESIL LGKFTTASDV WAFGVTLWET FTFCQEQPYS QLSDEQVIEN ENSBTAP00000006422/1-855 IRWMSWESIL LGKFTTASDV WAFGVTLWET FTFCQEQPYS QLSDEQVIEN bmy_21119T0/1-833 IRWMSWESIL LGKFTTASDV WAFGVTLWET FTFCQEQPYS QLSDEQVIEN 801 850 ENSTTRP00000010469/1-853 XXXXXXXXXX X--------- ----TYLPQP AICPDSVYKL MLSCWRRDTK ENSP00000356899/1-855 TGEFFRDQGR Q--------- ----TYLPQP AICPDSVYKL MLSCWRRDTK BACU014426/1-805 TGEFFRDQGR Q--------- ----AF---- ---------- ----WFIFSK ENSBTAP00000006422/1-855 TGEFFRDQGR Q--------- ----TYLPQP AICPDSVYKL MLSCWRRDTK bmy_21119T0/1-833 TGEFFRDQGR QYSNFKSLTL ELRTTYLPQP AICPDSVYKL MLSCWRRDTK 851 900 ENSTTRP00000010469/1-853 HRPSFQEIHL LLLQQGDE ENSP00000356899/1-855 NRPSFQEIHL LLLQQGDE BACU014426/1-805 SSNSFKG--- -------- ENSBTAP00000006422/1-855 HRPSFQEIHL LLLQQVDD bmy_21119T0/1-833 HRPSFQEVHL LLLQQGDE