KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:26 2014 Check: 00 .. Name: ENSTTRP00000010675/1-438 Len: 448 Check: 4498 Weight: 1.00 Name: ENSP00000273861/1-437 Len: 448 Check: 7509 Weight: 1.00 Name: ENSBTAP00000006428/1-448 Len: 448 Check: 4120 Weight: 1.00 Name: bmy_10811T0/1-269 Len: 448 Check: 298 Weight: 1.00 Name: BACU008750/1-439 Len: 448 Check: 6144 Weight: 1.00 // 1 50 ENSTTRP00000010675/1-438 MD-------- -GTGNATLLF GPSSLQPDNY TLSPNASSLS PGPDAPLAPA ENSP00000273861/1-437 MD-------- -GNDNVTLLF AP--LLRDNY TLAPNASSLG PGTDLALAPA ENSBTAP00000006428/1-448 MDSTDNATLL FGTDNGTLLF GQSTLPPDNY TLSPTASSLS PGPDAPLAPA bmy_10811T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU008750/1-439 MD-------- -GTGNATLLF DPSSLQPDNY TLSPNASSLS PGPDAPLAPA 51 100 ENSTTRP00000010675/1-438 SSAGPSPGLS VAPGPGVSFS PGPTPTLTPT AGCFAGGAAG PSPTLFAQPE ENSP00000273861/1-437 SSAGPGPGLS LGPGPSFGFS PGPTPTPEPT TSGLAGGAAS HGPSPFPRPW ENSBTAP00000006428/1-448 SSAGPGPVLS VAPGPGVSFS PGPTPTPAPT AGSFAGGAGG PSPTLFARPE bmy_10811T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU008750/1-439 SSAGPSPGLS VAPGPGVSFS PGPTPTLTPT AGCFAGGAAG PSPTSFAHPE 101 150 ENSTTRP00000010675/1-438 AAHEPPFWDT PLNHGLNVFV GAALCITMLG LGCTVDMNHF GAHVRRPVGA ENSP00000273861/1-437 APHALPFWDT PLNHGLNVFV GAALCITMLG LGCTVDVNHF GAHVRRPVGA ENSBTAP00000006428/1-448 AAHEPPFWDT PLNHGLNVLV GAALCITMLG LGCTVDGNHF GAHVRRPVGA bmy_10811T0/1-269 ---------- ---------- ---------- ---------- ---------- BACU008750/1-439 AAHEPPFWDT PLNHGLNVLV GAALCITMLG LGCTVDVNHF GAHVRRPVGA 151 200 ENSTTRP00000010675/1-438 LLAAVCQFGF LPLLAFLLAL TFSLDGSAAV AVLLCGCCPG GNLSNLMSLL ENSP00000273861/1-437 LLAALCQFGL LPLLAFLLAL AFKLDEVAAV AVLLCGCCPG GNLSNLMSLL ENSBTAP00000006428/1-448 LLAALCQFGF LPLLAFLLAL AFSLDGSAAV AVLLCGCCPG GNLSNLMSLL bmy_10811T0/1-269 ---------- ---------- ---------M AVLLCGCCPG GNLSNLMSLL BACU008750/1-439 LLAALCQFGF LPLLAFLLAL TFSLDGSAAM AVLLCGCCPG GNLSNLMSLL 201 250 ENSTTRP00000010675/1-438 VDGDMNLSII MTISSTLLAL VLMPLCLWIY SRAWINTPLV QLLPIGTVIL ENSP00000273861/1-437 VDGDMNLSII MTISSTLLAL VLMPLCLWIY SWAWINTPIV QLLPLGTVTL ENSBTAP00000006428/1-448 VDGDMNLSII MTISSTLLAL VLMPLCLWIY SRPWIDTPLV QLLPIGTVIL bmy_10811T0/1-269 VDGDMNLSII MTISSTLLAL VLMPLCLWIY SRAWINTPLV QLLPIGTVIL BACU008750/1-439 VDGDMNLSII MTISSTLLAL VLMPLCLWIY SRPWINTPLV QLLPIGTVIL 251 300 ENSTTRP00000010675/1-438 TLCSTLIPIG LGVFIRYKYN RVADYIVKVS LWSLLMTLVV LXXXXXXXXX ENSP00000273861/1-437 TLCSTLIPIG LGVFIRYKYS RVADYIVKVS LWSLLVTLVV LFIMTGTMLG ENSBTAP00000006428/1-448 TLCSTLIPIG LGVFIRYRYS RVADYIVKIS LWSLLMTLVV LFILTGTMLG bmy_10811T0/1-269 TLCSTLIPIG LGVFIRYRYN RVADYIVKVS LWSLLMTLVV LFIMTCTMLG BACU008750/1-439 TLCSTLIPIG LGVFIRYRYN RVADYIVKVS LWSLLMTLVV LFIMTCTMLG 301 350 ENSTTRP00000010675/1-438 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000273861/1-437 PELLASIPAA VYVIAIFMPL AGYASGYGLA TLFHLPPNCK RTVCLETGSQ ENSBTAP00000006428/1-448 PELLASIPAA VYVVAIFMPL AGYASGYGLA TLFHLPPNCK RTVSLETGSQ bmy_10811T0/1-269 PKLLASIPAA VYVVAIFMPL AGYASGYGLA TLFHLPPNCK RTVCLETGSQ BACU008750/1-439 PKLLASIPAA VYVVAIFMPL AGYASGYGLA TLFHLPPNCK RTVCLETGSQ 351 400 ENSTTRP00000010675/1-438 XXXXXXXXXX XXLSPQNIGS MYMFPLLYAL F-SAEAGIFF LIYKMYGSGI ENSP00000273861/1-437 NVQLCTAILK LAFPPQFIGS MYMFPLLYAL FQSAEAGIFV LIYKMYGSEM ENSBTAP00000006428/1-448 NVQLCTAILK LAFPPQNIGS MYMFPLLYAL FQSAEAGIFV LIYKMYGSGV bmy_10811T0/1-269 NVQLCTAILK LAFPPQNIGS MYMFPLLYAL FQSAEAGIFV LIYKMYGSGI BACU008750/1-439 NVQLCTAILK LAFPPQNIGS MYMFPLLYAL FQSAEAGIFV LIYKMYGSGI 401 450 ENSTTRP00000010675/1-438 LYKQDPLDED EDTDISYKKL KEEEMADTSY GTVKADNLIM METTQTSL ENSP00000273861/1-437 LHKRDPLDED EDTDISYKKL KEEEMADTSY GTVKAENIIM METAQTSL ENSBTAP00000006428/1-448 LHKQDPLDED EDTDISYKKL KEEEMADTSY GTVKADNLIM METTQTSL bmy_10811T0/1-269 LYKQDPLDED EDTDISYKKL KEEEMADTSY GTVKADNLIM METTQTSL BACU008750/1-439 LYKQDPLDED EDADISYKKL KEEEMADASY GTVKADNLIM METTQTSL