KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:28 2014 Check: 00 .. Name: ENSBTAP00000006434/1-309 Len: 312 Check: 6698 Weight: 1.00 Name: bmy_20834T0/1-191 Len: 312 Check: 3588 Weight: 1.00 Name: ENSTTRP00000007318/1-312 Len: 312 Check: 6247 Weight: 1.00 Name: ENSP00000285083/1-312 Len: 312 Check: 6815 Weight: 1.00 Name: BACU001556/1-233 Len: 312 Check: 5904 Weight: 1.00 // 1 50 ENSBTAP00000006434/1-309 ---MVVVIPR LLRGSLGAIC TQAALLRSTP SAFRYLTRSS VMKSKRRPDH bmy_20834T0/1-191 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007318/1-312 MACXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VMKSIRKTDH ENSP00000285083/1-312 MACAAVMIPG LLRCSVGAIR IEAASLRLTL STLRHLTLTS IMKSKRKTDH BACU001556/1-233 ---MAVMIPA LLRGFVGAIC AQAASRRLTP SALRHLTLSS IMKSKRKTDH 51 100 ENSBTAP00000006434/1-309 LERTADVVRQ EVVSAAKVCG VASESPSVKR LCLLVADKDF SFKAGQWVDF bmy_20834T0/1-191 ---MAGFLKR ASVS------ ---------- ---------- QYQSG----- ENSTTRP00000007318/1-312 LERTADVIRR EVVSAAKVCG AADESPSVKR LRLLVADKDF SFKAGQWVDF ENSP00000285083/1-312 MERTASVLRR EIVSAAKVCG AASESPSVKS LRLLVADQDF SFKAGQWVDF BACU001556/1-233 LERTADVVRR EVVSAAKVCG AADESPSVKR LRLLVADKDF SFKAGQWVDF 101 150 ENSBTAP00000006434/1-309 FIPGVSVVGG FSICSSPRLL EQERMIELAV KHANHPPALW IHNQCTLDSE bmy_20834T0/1-191 ---------- ---CAACIM- ---------- ---------- ---KCTLDSE ENSTTRP00000007318/1-312 FIPGVSVVGG FSICSSPRLL EQERMIELAV KYTNHPPALW IHNQCTLDSE ENSP00000285083/1-312 FIPGVSVVGG FSICSSPRLL EQERVIELAV KYTNHPPALW VHNTCTLDCE BACU001556/1-233 FIPGVSVVGG FSICSSPRLL EQERMIELAV KYTNHPPALW IHNQCTLDSE 151 200 ENSBTAP00000006434/1-309 VAVRVGGEFF FDPKPTDASR NLVLIAGGVG INPLLSILRH AADLLRERAS bmy_20834T0/1-191 VAVRVGGEFF FDPQPADTSR NLVLIAGGVG INPLLSILXH AADLHRERAN ENSTTRP00000007318/1-312 VAMRVGGEFF FDPQPADASR NLVLIAGGVG INPLLSILRH AADLHRERAN ENSP00000285083/1-312 VAVRVGGEFF FDPQPADASR NLVLIAGGVG INPLLSILRH AADLLREQAN BACU001556/1-233 VAVRVGGEFF FDPQPADTSR NLVLIAGGVG INPLLSVLRH AADLHRERAN 201 250 ENSBTAP00000006434/1-309 KGQGYEMGTV RLLYSAKDTS ELLFKKNILD LVNEFPEKIA CSLHVTKQTT bmy_20834T0/1-191 KGRGYEIGTI RLFYSAKNTS ELLFKKNILD LVNEFPEKIA CSLHVTKQTT ENSTTRP00000007318/1-312 KGRGYEIGTI RLFYSAKNTS ELLFKKNILD LVNEFPEKIA CSLHVTKQTT ENSP00000285083/1-312 KRNGYEIGTI KLFYSAKNTS ELLFKKNILD LVNEFPEKIA CSLHVTKQTT BACU001556/1-233 KGRGYEIGTI RLFYSAKNTS ELLFK----- ---------- ---------- 251 300 ENSBTAP00000006434/1-309 QITADLRPYI TEGRITQKEI RDHISKETLF YICGPPPMTD FFSKELESSR bmy_20834T0/1-191 QISADLKPYI TEGRITEKEI RYHISKETLF YICGPPPMTD FFSKELESSH ENSTTRP00000007318/1-312 QISADLKPYI TEGRITEKEI RYHISRETLF YLCGPPPMTD FFSKELESSH ENSP00000285083/1-312 QINAELKPYI TEGRITEKEI RDHISKETLF YICGPPPMTD FFSKQLENNH BACU001556/1-233 ---------- ---------V RGDCVSRSLL ---------- ---------- 301 350 ENSBTAP00000006434/1-309 VPREHICFEK WW bmy_20834T0/1-191 IPKEHIYFEK WW ENSTTRP00000007318/1-312 VPKEHIYFEK WW ENSP00000285083/1-312 VPKEHICFEK WW BACU001556/1-233 ---------- --