KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:29 2014 Check: 00 .. Name: ENSP00000303042/1-818 Len: 1010 Check: 497 Weight: 1.00 Name: ENSBTAP00000006439/1-817 Len: 1010 Check: 126 Weight: 1.00 Name: ENSTTRP00000009653/1-767 Len: 1010 Check: 5828 Weight: 1.00 Name: BACU004671/1-971 Len: 1010 Check: 9174 Weight: 1.00 Name: bmy_03056T0/1-875 Len: 1010 Check: 7737 Weight: 1.00 // 1 50 ENSP00000303042/1-818 ---------- ---------- ---------- ---------- -MERY--KAL ENSBTAP00000006439/1-817 ---------- ---------- ---------- ---------- -MERF--KAL ENSTTRP00000009653/1-767 ---------- ---------- ---------- ---------- ---------- BACU004671/1-971 -----MMWI- ---QRGREM- ---TSGFHD- SLWFP----- -VLRFFNPAL bmy_03056T0/1-875 MCCLASPWTP PLETRGSVMG CRGIGGVSEL GLWREGSCYK GFFCFLSLAL 51 100 ENSP00000303042/1-818 EQLLTELDDF LKILDQENLS STALVKKSCL AELLRLYTKS SSSDEEYIYM ENSBTAP00000006439/1-817 EQLLTELDDF LRILDQENLS STAVVKKSGL AELLRLYTKS SSSDEEYIYM ENSTTRP00000009653/1-767 ---------- ---------- ---------- ---------- --SDEEYIYM BACU004671/1-971 EQLLTELDDF LRILDQENLS STAVVKKSGL AELLRLYTKS SSSDEEYIYM bmy_03056T0/1-875 EQLLTELDDF LRILDQENLS STAVVKKSGL AELLRLYTKS SSSDEEYIYM 101 150 ENSP00000303042/1-818 NKVTINKQQN AESQGKAPEE QGLLPNGEPS QHSSAPQKSL PDLPPPKMIP ENSBTAP00000006439/1-817 NKVTVHKQQN AESQDKAPEQ QNPLTNGEPP QPSSAPQKSL PDLPPPKMIP ENSTTRP00000009653/1-767 NKVTVHKQQD AESQDKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIP BACU004671/1-971 NKVTVHKQQD AESQDKAPEE QSPLTNGEPG QHSSAPQKSL PDLPPPKIIP bmy_03056T0/1-875 NKVTVHKQQD AESQDKAPEE QSPLTNGEPG QHSSAPQKSL PDLPPPKIIP 151 200 ENSP00000303042/1-818 ERKQLAIPKT ESPEGYYEEA EPYDTSLN-- ---------- ---------- ENSBTAP00000006439/1-817 ERKQLSVPKI ESPEGYYEEA EPYDTSLN-- ---------- ---------- ENSTTRP00000009653/1-767 ERKQLSTPKI ESPEGYYEEA EPYDTSLN-- ---------- ---------- BACU004671/1-971 ERKQLSIPKV ESPEGYYEEA EPYDTSLNGT SWGRGSEGVQ SLPARMPVPA bmy_03056T0/1-875 ERKQLSIPKI ESPEGYYEEA EPYDTSLN-- ---------- ---------- 201 250 ENSP00000303042/1-818 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006439/1-817 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009653/1-767 ---------- ---------- ---------- ---------- ---------- BACU004671/1-971 PLVVTGTLTL ARNTGQPGRL LLESVARIEN WPQSIWPLVC WGAETYSRPN bmy_03056T0/1-875 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000303042/1-818 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006439/1-817 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009653/1-767 ---------- ---------- ---------- ---------- ---------- BACU004671/1-971 PPARRGSGRS TRSWFTVSDA FCGPAWMLLD SAQKCDKEEV FESIKQLADV bmy_03056T0/1-875 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000303042/1-818 -EDGEAVSSS YESYDEEDGS KGKSAPYQWP SPEAGIELMR DARICAFLWR ENSBTAP00000006439/1-817 -EDGEAVSSS YESYDEEESS KGKSAPHQWP SPEASIELMR DARICAFLWR ENSTTRP00000009653/1-767 -EDGEAVSSS YESYDEDESS KGKSAPYQWP SPEASIELMR DARICAFLWR BACU004671/1-971 SEDGEAVSSS YESYDEDESS KGKSAPYQWP SPEASIELMR DARICAFLWR bmy_03056T0/1-875 -EDGEAVSSS YESYDEDESS KGKSAPYQWP SPEASIELMR DARICAFLWR 351 400 ENSP00000303042/1-818 KKWLGQWAKQ LCVIKDNRLL CYKSSKDHSP QLDVNLLGSS VIHKEKQVRK ENSBTAP00000006439/1-817 KKWLGQWAKQ LCVIKDTRLL CYKSSKDHSP QLDVSLLGSS VVHKEKQVRK ENSTTRP00000009653/1-767 KKWLGQWAKQ LCVIKDTRLL CYKSSKDHSP QLDVNLLGSS VVHKEKQVRK BACU004671/1-971 KKWLGQWAKQ LCVIKDTRLL CYKTSKDHSP QLDVNLLGSS VVHKEKQVRK bmy_03056T0/1-875 KKWLGQWAKQ LCVIKDTRLL CYKTSKDHSP QLDVNLLGSS VVHKEKQVRK 401 450 ENSP00000303042/1-818 KEHKLKITPM NADVIVLGLQ SKDQAEQWLR VIQEVSGLPS EGASEGNQYT ENSBTAP00000006439/1-817 KEHKLKITPL NADVIVLGLQ SRDQAEQWLR VIQEVSGLPS EGACEGSQFT ENSTTRP00000009653/1-767 KEHKLKITPV SADVIVLGLQ SKDQAEQWLR VIQEVSGLPS EGACEGSQYT BACU004671/1-971 KEHKLKITPM NADVIVLGLQ SKDQAEQWLR VIQEVSGLPS EGACEGNQYT bmy_03056T0/1-875 KEHKLKITPM SADVIVLGLQ SKDQAEQWLR VIQEVSGLPS EGACEGNQYT 451 500 ENSP00000303042/1-818 PDAQRFNCQK PDIAEKYLSA SEYGSSVDGH PEVPETKDVK KKCSAGLKLS ENSBTAP00000006439/1-817 PDAQRLSCPK PDITEKYLSA SECGSPIDGH PEVPETKDVK KKCSAGLKLS ENSTTRP00000009653/1-767 PDAQRPSCPK PDVTEKYLSA SDYGSSIDGH PEVPETKDVK KKCSAGLKLS BACU004671/1-971 PDAQRLSCPK PDVTEKYLSA SEYGSSIDGH PEVPETKDVK KKCSAGLKLS bmy_03056T0/1-875 PDAQRLSCLK PDITEKYLSA SEYGSSIDGH PEVPETKDVK KKCSAGLKLS 501 550 ENSP00000303042/1-818 NLMNLGRKKS TSLEPVERSL ETSSYLNVLV NSQWKSRWCS VRDNHLHFYQ ENSBTAP00000006439/1-817 NLMNLGRKKS TSLEPPDRSL ETSSYLNVLV NSQWKSRWCS VRDSHLYFYQ ENSTTRP00000009653/1-767 NLMNLGRKKS TSLEPPERSL ETTSYLNVLV NSQWKSRWCS VRDSHLYFYQ BACU004671/1-971 NLMNLGRKKS TSLEPPERSL ETSSYLNVLV NSQWKSRWCS VRDSHLYFYQ bmy_03056T0/1-875 NLMNLGRKKS TSLEPPERSL ETSSYLNVLV NSQWKSRWCS VRDSHLYFYQ 551 600 ENSP00000303042/1-818 DRNRSKVAQQ PLSLVGCEVV PDPSPDHLYS FRILHKGEEL AKLEAKSSEE ENSBTAP00000006439/1-817 DRNRSKAAQQ PLSLLGCEVV PDPSPDHLYS FRILHNGEEL AKLEAKSSEE ENSTTRP00000009653/1-767 DRNRSKAAQQ PLSLVGCEVV PDPSPDHLYS FRILHDGEEL AKLEAKSSEE BACU004671/1-971 DRNRSKAAQQ PLSLVGCEVV PDPSPDHLYS FRILHDGEEL AKLEAKSSEE bmy_03056T0/1-875 DRNRSKAAQQ PLSLVGCEVV PDPSPDHLYS FRILHDGEEL AKLEAKSSEE 601 650 ENSP00000303042/1-818 MGHWLGLLLS ESGSKTDPEE FTYDYVDADR VSCIVSAAKN SLLLMQRKFS ENSBTAP00000006439/1-817 MGHWLGLLLS ESGSKTDPEE FTYDYVDADR VSCIVSAAKT SLLLMQRKFS ENSTTRP00000009653/1-767 MGHWLGLLLS ESGSKTDPEE FTYDYVDADR VSCIVSAAKT SLLLMQRKFS BACU004671/1-971 MGHWLGLLLS ESGSKTDPEE FTYDYVDADR VSCIVSAAKT SLLLMQRKFS bmy_03056T0/1-875 MGHWLGLLLS ESGSKTDPEE FTYDYVDADR VSCIVSAAKT SLLLMQRKFS 651 700 ENSP00000303042/1-818 EPNTYIDGLP SQDRQEELYD DVDLSELTAA VEPTEEATPV ADDPNERESD ENSBTAP00000006439/1-817 EPNTYIDGLP SQDRQELLYD DVEVSELTTA GEAPEEATPA TDAPGEPDPD ENSTTRP00000009653/1-767 EPNTYIDGLP SQHHQELLYD DVEVSELTAV GEAPEEAAPA TDAPSEPDSD BACU004671/1-971 EPNTYIDGLP SQDHQELLYD DVEVSELTAV GEAPEEAAPA TGAPSEPDPD bmy_03056T0/1-875 EPNTYIDGLP SQDHQELLYD DVEVSELTAV GEAPEEAAPA TDAPSEPDPD 701 750 ENSP00000303042/1-818 RVYLDLTPVK SFLHGPSSAQ AQASSPTLSC LDNATEA--L PADSGPGPTP ENSBTAP00000006439/1-817 RVYLDLTPIK SFLHGDSG-- ARAPSPTPPH QDPPAETLPL PEDSD--PAP ENSTTRP00000009653/1-767 RVYLDLTPVK SFLHGTGGAQ ARAPSPTLPQ PDPPAEA--L PADLN--PTP BACU004671/1-971 RVYLDLTPVK SFLHGTGGAQ ARASSPMPPQ PDPPAEA--L SADLN--PTP bmy_03056T0/1-875 RVYLDLTPVK SFLHGTGGAQ ARAPSPTPPQ PDPPAEA--L PADLN--PTP 751 800 ENSP00000303042/1-818 DEPCIKCPEN LG-------- -EQQLESLEP EDPSLRITTV KIQTEQQRIS ENSBTAP00000006439/1-817 DEPLIKSPEN PEL------- -QMQQESQEP EEPSLGGTEV KLQAGQQKTS ENSTTRP00000009653/1-767 DEPLMVSPEN PEL------- --QQQESQEP EEPSLGITAV KIQTEQQKIS BACU004671/1-971 DEPLVKSPEN PEL------- -QMQQGSQEP EEPCLGITAV KIQTEQQKIS bmy_03056T0/1-875 DEPLVKSPEN PELQVQGVPQ QQMQQGSQEP EEPSLGITAV KIQTEQQKIS 801 850 ENSP00000303042/1-818 FPPSCPDAVV ATPPGASPPV KDRLRVTSAE IKLGKNRTEA EVKRYTEEKE ENSBTAP00000006439/1-817 PSPSCPDTVA VTPAGSSPPV KDRLKAASPE IKLGKNRTEA EVKRYTEEKE ENSTTRP00000009653/1-767 FPPSCPDTVP ITPAGASPPV KDRLKATNAE IKLGKNRTEA EVKRYTEEKE BACU004671/1-971 FPPSCPDTVP VAPAGASPPV KDRLKATNAE IKLGKNRTEA EVKRYTEEKE bmy_03056T0/1-875 FPPSCPDTVP VAPAGASPPV KDRLKATNAE IKLGKNRTEA EVKRYTEEKE 851 900 ENSP00000303042/1-818 RLEKKKEEIR GHLAQLRKEK RELKETLLKC T-------DK EVLASLEQKL ENSBTAP00000006439/1-817 RLEKKKEEIR GHLAQLRREK RELKETLLKC T-------DK GAAASLEQKL ENSTTRP00000009653/1-767 RLEKKKEEIR GHLAQLRREK RELKETLLKC T-------DK GAAASLEEKL BACU004671/1-971 RLEKKKEEIR GHLAQLRREK RELKETLLKC T-------DK GAAAGLEEKL bmy_03056T0/1-875 RLEKKKEEIR GHLAQLRREK RELKETLLKC TADWLLSADK GAAAGLEEKL 901 950 ENSP00000303042/1-818 KEIDEECRGE ESRRVDLELS IMEVKDNLKK AEAGPVTLGT TVDTTHLENV ENSBTAP00000006439/1-817 REVDEECRVE ERRRVDLELS IVEVKDSLRK AEAGPVTLGT TVDTTHLESV ENSTTRP00000009653/1-767 KEIDEECRVE ECRRVDLELS IVEVKDSLKK AEAGPVTLGT TVDTTHLENV BACU004671/1-971 KEIDEECRVE ERRRVDLELS IVEVKDSLKK AEAGPVTLGT TVDTTHLENV bmy_03056T0/1-875 KEIDEECRVE ERRRVDLELS IVEVKDSLKK AEAGPVTLGT TVDTTHLENV 951 1000 ENSP00000303042/1-818 SPRPKAVTPA SAPDCTPVNS ATTLKNRPLS VVVTGKGTVL QKAKE----- ENSBTAP00000006439/1-817 SPRPKAATPT PAPDCTPVNS ATALKNRPLS VMVTGKGTVL QKAKE----- ENSTTRP00000009653/1-767 SPRPKAATST PAPDCTPVNS ATALKNRPLS VMVTGKGTVL QKAKE----- BACU004671/1-971 SPRPKAATPT PAPDCTPVNS ATALKNRPLS VMVTGKGTVL QKAKGIYFLC bmy_03056T0/1-875 SPRPKAATPT PAPDCTPVNS ATALKNRPLS VMVTGKGTVL QKAKE----- 1001 1050 ENSP00000303042/1-818 ---WEKKGAS ENSBTAP00000006439/1-817 ---WEKKGAS ENSTTRP00000009653/1-767 ---WEKKGAS BACU004671/1-971 HKHLVSHVVS bmy_03056T0/1-875 ---WEKKGAS