KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:32 2014 Check: 00 .. Name: ENSTTRP00000004381/1-970 Len: 1044 Check: 1538 Weight: 1.00 Name: ENSBTAP00000006451/1-693 Len: 1044 Check: 2347 Weight: 1.00 Name: ENSP00000430338/1-995 Len: 1044 Check: 6422 Weight: 1.00 Name: bmy_10572T0/1-933 Len: 1044 Check: 5331 Weight: 1.00 Name: BACU000496/1-995 Len: 1044 Check: 2949 Weight: 1.00 // 1 50 ENSTTRP00000004381/1-970 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------M ENSP00000430338/1-995 ---------- ---------- ---------- ---------- ---------M bmy_10572T0/1-933 QPFWTVWVSG TFRVRPRSRG FRRSQAQGPR PSVRLEPGNV PGGSGGGGRM BACU000496/1-995 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000004381/1-970 ---------- ---------- --WFEFLLEE SLLEKHLRKP CPXXXXXXXX ENSBTAP00000006451/1-693 SAEAADREAA TSSRPCTPPQ TSWFEFLLQE SLLEKHLRKP CPDPAPVQLI ENSP00000430338/1-995 SAEAADREAA TSSRPCTPPQ TCWFEFLLEE SLLEKHLRKP CPDPAPVQLI bmy_10572T0/1-933 SAEAADREAA TSSRPCTPPQ TCWFEFLLEE SLLEKHLRKP CP-------- BACU000496/1-995 SAEAADREAA TSSRPCTPPQ TCWFEFLLEE SLLEKHLRKP CPDPAPVQLI 101 150 ENSTTRP00000004381/1-970 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000006451/1-693 VQFLEQASKP SVNEQNQVQP PPDNKRNRVL KLLALKVAAH LKWDLDILEK ENSP00000430338/1-995 VQFLEQASKP SVNEQNQVQP PPDNKRNRIL KLLALKVAAH LKWDLDILEK bmy_10572T0/1-933 ---------- -VNEQNQVQP PPDNKRNRIL KLLALKVAAH LKWDLDVLEK BACU000496/1-995 VQFLEQASKP SVNEQNQVQP PPDNKRNRIL KLLALKVAAH LKWDLDVLEK 151 200 ENSTTRP00000004381/1-970 XLSVPVLNML LNELLCISKV PPGTKHIDMD LATLPPTTAM AILLYNRWAI ENSBTAP00000006451/1-693 SLSVPVLNML LNELLCISKV PPGTKHIDMD LATLPPTTAM AILLYNRWAI ENSP00000430338/1-995 SLSVPVLNML LNELLCISKV PPGTKHVDMD LATLPPTTAM AVLLYNRWAI bmy_10572T0/1-933 SLSVPVLNML LNELLCISKV PPGTKHVDMD LATLPPTTAM AILLYNRWAI BACU000496/1-995 SLSVPVLNML LNELLCISKV PPGTKHVDMD LATLPPTTAM AILLYNRWAI 201 250 ENSTTRP00000004381/1-970 RTIVQSSFPV KQPKPGPPQL SVMNQMQQEK ELTENILKVX XXXXXXXXXX ENSBTAP00000006451/1-693 RTIVQSSFPV KQAKPGPPQL SVMNQMQQEK ELTENILKVL KEQASDSILV ENSP00000430338/1-995 RTIVQSSFPV KQAKPGPPQL SVMNQMQQEK ELTENILKVL KEQAADSILV bmy_10572T0/1-933 RTIVQSSFPV KQAKPGPPQL SVMNQMQQEK ELTENILKVL KEQASDSILV BACU000496/1-995 RTIVQSSFPV KQAKPGPPQL SVMNQMQQEK ELTENILKVL KEQASDSILV 251 300 ENSTTRP00000004381/1-970 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000006451/1-693 LEAALKLNKD LYVHTMRTLD LLAVEPGMVN GETESSTAGL KIKTEEMQCQ ENSP00000430338/1-995 LEAALKLNKD LYVHTMRTLD LLAMEPGMVN GETESSTAGL KVKTEEMQCQ bmy_10572T0/1-933 LEAALKLNKD LYVHTMRTLD LLAMEPGVVN GETESSTVGL KIKTEEMQCQ BACU000496/1-995 LEAALKLNKD LYVHTMRTLD LLAMEPGVVN GETESSTVGL KIKTEEMQCQ 301 350 ENSTTRP00000004381/1-970 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXIGSL SLHCTIDEKR ENSBTAP00000006451/1-693 VCYDLGAAYF QQGSTNPAVY ENAREKFFRT KELIAEIGSL SLHCTIDEKR ENSP00000430338/1-995 VCYDLGAAYF QQGSTNSAVY ENAREKFFRT KELIAEIGSL SLHCTIDEKR bmy_10572T0/1-933 VCYDLGAAYF QQGSTNPAVX ENAREKFFRT KELIAEIGSL SLHCTIDEKR BACU000496/1-995 VCYDLGAAYF QQGSTNPAAY ENAREKFFRT KELIAEIGSL SLHCTIDEKR 351 400 ENSTTRP00000004381/1-970 LAGYCQACGV LVPSSDSASQ QLTPYSQVHI CLRSGNYQE- TRIFAED-LT ENSBTAP00000006451/1-693 LAGYCQACDV LVPSSDSTSQ QLTPYSQVHI CLRSGNYQEV IKIFVEDNLT ENSP00000430338/1-995 LAGYCQACDV LVPSSDSTSQ QLTPYSQVHI CLRSGNYQEV IQIFIEDNLT bmy_10572T0/1-933 LAGYCQACDV L--------- ---------- --------EV TKIFAEDNLT BACU000496/1-995 LAGYCQACDV LVPSSDSTSQ QLTPYSQVHI CLRSGNYQEV TKIFAEDNLT 401 450 ENSTTRP00000004381/1-970 FSLPXXXXXX XXXXXXXXXX XXNEALDEIC FKVCACNTVR DILEGRAIGV ENSBTAP00000006451/1-693 FSLPIQFRQS VLRELFQKAQ QGNEALDEIC FKVCACNTVR DVLEGRTISV ENSP00000430338/1-995 LSLPVQFRQS VLRELFKKAQ QGNEALDEIC FKVCACNTVR DILEGRTISV bmy_10572T0/1-933 FSLPVQFRQS VLRELFQKAQ QGNEALDEIC FKVCACNTVR DILEGRAIG- BACU000496/1-995 FSLPVQFRQS VLRELFQKAQ QGNEALDEIC FKVCACNTVR DILEGRAIGV 451 500 ENSTTRP00000004381/1-970 QFNQLFLRPN KEKIDFLLEV CSRSINLEKA SDSLKGNMAA FLKNVCLGLE ENSBTAP00000006451/1-693 QFNQLFLRPN KEKIDFLLEV CSRSINLEKA SDTLKGNMAA FLKNVCLGLE ENSP00000430338/1-995 QFNQLFLRPN KEKIDFLLEV CSRSVNLEKA SESLKGNMAA FLKNVCLGLE bmy_10572T0/1-933 ---------- ---------V CSRSINLEKA SDSLKGNMAA FLKNVCLGLE BACU000496/1-995 QFNQLFLRPN KEKIDFLLEV CSRSINLEKA SDSLKGNMAA FLKNVCLGLE 501 550 ENSTTRP00000004381/1-970 DLQYVFMISS HELFITLLKD EERKLLVDQM RKRSPRVNLC IKPVTSFYDI ENSBTAP00000006451/1-693 DLQYVFMISS HELFITLLKD EERKLLVDQM RKRSPRINLC IKPVTSFYDI ENSP00000430338/1-995 DLQYVFMISS HELFITLLKD EERKLLVDQM RKRSPRVNLC IKPVTSFYDI bmy_10572T0/1-933 DLQYVFMISS HELFITLLKD EERKLLVDQM RKRSPRVNLC IKPVTSFYDI BACU000496/1-995 DLQYVFMISS HELFITLLKD EERKLLVDQM RKRSPRVNLC IKPVTSFYDI 551 600 ENSTTRP00000004381/1-970 PASASVNIGQ LEHQLILSVD PWRIRQILIE LHGMTSERQF WTVSNKWEIP ENSBTAP00000006451/1-693 PASASVNIGQ LEHQLILSVD PWRIRQILIE LHGMTSEREF WTVSNKWELP ENSP00000430338/1-995 PASASVNIGQ LEHQLILSVD PWRIRQILIE LHGMTSERQF WTVSNKWEVP bmy_10572T0/1-933 PASASVNIGQ LEHQLILS-- ---------- ---------- ------WEIP BACU000496/1-995 PASASVNIGQ LEHQLILSVD PWRIRQILIE LHGMTSERQF WTVSNKWEIP 601 650 ENSTTRP00000004381/1-970 SVYSGVILGI KDNLTRDLVY ILMAKGLHCS TVKDFTHAKQ LFAACLELVT ENSBTAP00000006451/1-693 LVYSSVILGI KDNLTRDLVY ILMAKGLHCS TVKDFSHAKQ LFAACLELVT ENSP00000430338/1-995 SVYSGVILGI KDNLTRDLVY ILMAKGLHCS TVKDFSHAKQ LFAACLELVT bmy_10572T0/1-933 SVYSGVILGI KDNLTRDLVY ILMAKGLHCS TVKDFSHAKQ LFAACLELVT BACU000496/1-995 SVYSGVILGI KDNLTRDLVY ILMAKGLHCS TVKDFSHAKQ LFAACLELVT 651 700 ENSTTRP00000004381/1-970 EFSPKLRQVM LNEMLLLDIH THEAGTGQSG ERPPSDLISR VRGYLEMRLP ENSBTAP00000006451/1-693 EFSPKLRQVM LNEMLLLDIY THEAGTGQSG ERPPSDLISR VRGYLEMRLP ENSP00000430338/1-995 EFSPKLRQVM LNEMLLLDIH THEAGTGQAG ERPPSDLISR VRGYLEMRLP bmy_10572T0/1-933 EFSPKLRQVM LNEMLLLDIH THEAGTGQSG ERPPSDLISR VRGYLEMRLP BACU000496/1-995 EFSPKLRQVM LNEMLLLDIH THEAGTGQSG ERPPSDLISR VRGYLEMRLP 701 750 ENSTTRP00000004381/1-970 DIPLRQVIAE ECVAFMLNWR ENEYLTLQVP AFLLQSNPYV KLGQLLAATC ENSBTAP00000006451/1-693 DIPFRQVISE ECVAFMLNWR ENEYLTLQVP AFLLQSNPFV KV-------- ENSP00000430338/1-995 DIPLRQVIAE ECVAFMLNWR ENEYLTLQVP AFLLQSNPYV KLGQLLAATC bmy_10572T0/1-933 DIPLRQVIAE ECVAFMLNWR ENEYLTLQVP AFLLQSNPYV KLGQLLAATC BACU000496/1-995 DIPLRQVIAE ECVAFMLNWR ENEYLTLQVP AFLLQSNPYV KLGQLLAATC 751 800 ENSTTRP00000004381/1-970 KELPGPKESR RTAKDLWEVV VQICSVSSQH KRGNDGRISL IKQRESTLGI ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------- ENSP00000430338/1-995 KELPGPKESR RTAKDLWEVV VQICSVSSQH KRGNDGRVSL IKQRESTLGI bmy_10572T0/1-933 KELPGPKESR RTAKDLWEVV VQICSVSSQH KRGNDGRISL IKQRESTLGI BACU000496/1-995 KELPGPKESR RTAKDLWEVV VQICSVSSQH KRGNDGRISL IKQRESTLGI 801 850 ENSTTRP00000004381/1-970 MYRSELLSFI KKLREPLVLT IILSLFVKLH NVREDIVNDI TAEHISIWPS ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------- ENSP00000430338/1-995 MYRSELLSFI KKLREPLVLT IILSLFVKLH NVREDIVNDI TAEHISIWPS bmy_10572T0/1-933 MYRSELLSFI KKLREPLVLT IILSLFVKLH NVREDIVNDI TAEHISIWPS BACU000496/1-995 MYRSELLSFI KKLREPLVLT IILSLFVKLH NVREDIVNDI TAEHISIWPS 851 900 ENSTTRP00000004381/1-970 SIPNLQSVDF EAVAITVKEL VRYSLSINPN NHSWLIIQAD IYFATNQYSA ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------- ENSP00000430338/1-995 SIPNLQSVDF EAVAITVKEL VRYTLSINPN NHSWLIIQAD IYFATNQYSA bmy_10572T0/1-933 SIPNLQSVDF EAVAITVKEL VRYALSINPN NHSWLIIQAD IYFATNQYSA BACU000496/1-995 SIPNLQSVDF EAVAITVKEL VRYALSINPN NHSWLIIQAD IYFATNQYSA 901 950 ENSTTRP00000004381/1-970 ALHYYLQAGA VCSDFFNKAV PPDVYTDQVI KRMIKCCSLL NCHTQVAILC ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------- ENSP00000430338/1-995 ALHYYLQAGA VCSDFFNKAV PPDVYTDQVI KRMIKCCSLL NCHTQVAILC bmy_10572T0/1-933 ALHYYLQAGA VCSDFFNKAV PPDVYTD--- ---------- ----QVAILC BACU000496/1-995 ALHYYLQAGA VCSDFFNKAV PPDVYTDQVI KRMIKCCSLL NCHTQVAILC 951 1000 ENSTTRP00000004381/1-970 QFLREIDYKT AFKSLQEQNS HDAMDSYYDY IWDVTILEYL TYLHHKRGET ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---------- ENSP00000430338/1-995 QFLREIDYKT AFKSLQEQNS HDAMDSYYDY IWDVTILEYL TYLHHKRGET bmy_10572T0/1-933 QFLREIDYKT AFKSLQEQNS HDAMDSYYDY IWDVTILEYL TYLHHKRGET BACU000496/1-995 QFLREIDYKT AFKSLQEQNS HDAMDSYYDY IWDVTILEYL TYLHHKRGET 1001 1050 ENSTTRP00000004381/1-970 DKRQIAIKAI GQTELNASNP EEVLQLAAQR RKKKFLQAMA KLYF ENSBTAP00000006451/1-693 ---------- ---------- ---------- ---------- ---- ENSP00000430338/1-995 DKRQIAIKAI GQTELNASNP EEVLQLAAQR RKKKFLQAMA KLYF bmy_10572T0/1-933 DKRQIAIKAI GQTELNASNP EEVLQLAAQR RKKKFLQAMA KLYF BACU000496/1-995 DKRQIAIKAI GQTELNASNP EEVLQLAAQR RKKKFLQAMA KLYF