KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:32 2014 Check: 00 .. Name: ENSP00000429089/1-404 Len: 405 Check: 6333 Weight: 1.00 Name: ENSBTAP00000006455/1-349 Len: 405 Check: 1530 Weight: 1.00 Name: ENSTTRP00000004407/1-404 Len: 405 Check: 5254 Weight: 1.00 Name: bmy_10571T0/1-405 Len: 405 Check: 6639 Weight: 1.00 Name: BACU018931/1-401 Len: 405 Check: 4100 Weight: 1.00 // 1 50 ENSP00000429089/1-404 MSRRSSRLQA KQQPQPSQTE SPQEAQIIQA KKRKTTQDVK KRREE-VTKK ENSBTAP00000006455/1-349 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004407/1-404 MSRRSSRLQA KQQPQPSQTD SPQETQIIQA KKRKTAQDVK KRKEE-VIKK bmy_10571T0/1-405 MSRRSSRLQA KQQPQPSQTD SPQETQIIQA KKRKTAQDVK KRKEEKVIKK BACU018931/1-401 ----SSRLQA KQQPQPSQTD SPQETQIIQA KKRKTAQDVK KRKEEKVIKK 51 100 ENSP00000429089/1-404 HQYEIRNCWP PVLSGGISPC IIIETPHKEI GTSDFSRFTN YRFKNLFINP ENSBTAP00000006455/1-349 ------NCWP PVLSGGISPC IIIETPHKEI GTSDFSRFTN YRFKNLFINP ENSTTRP00000004407/1-404 HQYEIRNCWP PVLSGGISPC IIIETPHKEI GTSDFSRFTN YRFKNLFINP bmy_10571T0/1-405 HQYEIRNCWP PVLSGGISPC IIIETPHKET GTSDFSRFTN YRFKNLFINP BACU018931/1-401 HQYEIRNCWP PVLSGGISPC IIIETPHKET GTSDFSRFTN YRFKNLFINP 101 150 ENSP00000429089/1-404 SPLPDLSWGC SKEVWLNMLK KESRYVHDKH FEVLHSDLEP QMRSILLDWL ENSBTAP00000006455/1-349 SPLPDLSWGC SQDVWLNMLK KETRYVHDKH FEVLHSELEP QMRSILLDWL ENSTTRP00000004407/1-404 SPLPDLSWGC SQDVWLNMLK KETRYVHDKH FEVLHSELEP QMRSILLDWL bmy_10571T0/1-405 SPLPDLSWGC SQDVWLNMLK KETRYVHDKH FEVLHSELEP QMRSILLDWL BACU018931/1-401 SPLPDLSWGC SQDVWLNMLK KETRYVHDKH FEVLHSELEP QMRSILLDWL 151 200 ENSP00000429089/1-404 LEVCEVYTLH RETFYLAQDF FDRFMLTQKD INKNMLQLIG ITSLFIASKL ENSBTAP00000006455/1-349 LEVCEVYTLH RETFYLAQDF FDRFMLTQKD INKNMLQLIG ITSLFIASKL ENSTTRP00000004407/1-404 LEVCEVYTLH RETFYLAQDF FDRFMLTQKD INKNMLQLIG ITSLFIASKL bmy_10571T0/1-405 LEVCEVYTLH RETFYLAQDF FDRFMLTQKD INKNMLQLIG ITSLFIASKL BACU018931/1-401 LEVCEVYTLH RETFYLAQDF FDRFMLTQKD INKNMLQLIG ITSLFIASKL 201 250 ENSP00000429089/1-404 EEIYAPKLQE FAYVTDGACS EEDILRMELI ILKALKWELC PVTIISWLNL ENSBTAP00000006455/1-349 EEIYAPKLQE FAYVTDGACS EEDILRMELA ILKALKWELC PVTVISWLNL ENSTTRP00000004407/1-404 EEIYAPKLQE FAYVTDGACS EEDILRMELI ILKALKWELC PVTVISWLNL bmy_10571T0/1-405 EEIYAPKLQE FAYVTDGACS EEDILRMELI ILKALKWELC PVTVISWLNL BACU018931/1-401 EEIYAPKLQE FAYVTDGACS EEDILRMELI ILKALKWELC PVTVISWLNL 251 300 ENSP00000429089/1-404 FLQVDALKDA PKVLLPQYSQ ETFIQIAQLL DLCILAIDSL EFQYRILTAA ENSBTAP00000006455/1-349 FLQVDALKDA PKVLLPQYSQ EKFIQIAQLL DLCILAIDSL EFQYRILAAA ENSTTRP00000004407/1-404 FLQVDALKDA PKVLLPQYSQ EKFIQIAQLL DLCILAIDSL EFQYRILAAA bmy_10571T0/1-405 FLQVDALKDA PKVLLPQYSQ EKFIQIAQLL DLCILAIDSL EFQYRILAAA BACU018931/1-401 FLQVDALKDA PKVLLPQYSQ EKFIQIAQLL DLCILAIDSL EFQYRILAAA 301 350 ENSP00000429089/1-404 ALCHFTSIEV VKKASGLEWD SISECVDWMV PFVNVVKSTS PVKLKTFKKI ENSBTAP00000006455/1-349 ALCHFTSIEV VKKASGLEWD NISECVDWMV PFVSVVKSTS PAKLKIFKKI ENSTTRP00000004407/1-404 ALCHFTSREV VKKASGLEWD NISECVDWMV PFVSIVTSTS PVKLKVFKKI bmy_10571T0/1-405 ALCHFTSLEV VKKASGLEWD NISECVDWMV PFVSIVKSTS PVKLKVFKKI BACU018931/1-401 ALCHFTSLEV VKKASGLEWD NISECVDWMV PFVSIVKSTS PVKLKVFKKI 351 400 ENSP00000429089/1-404 PMEDRHNIQT HTNYLAMLEE VNYINTFRKG GQLSPVCNGG IMTPPKSTEK ENSBTAP00000006455/1-349 SMEDRHNIQT HTNYLAMLDE VNYVNTFRKE GQLSPVCNGG IMTPPKSTEK ENSTTRP00000004407/1-404 SMEDRHNIQT HTNYLAMLDE VNYINTFRKG GQLSPVCNGG IMTPPKSTEK bmy_10571T0/1-405 SMEDRHNIQT HTNYLAMLDE VNYMNTFRKG GQLSPVCNGG IMTPPKSTEK BACU018931/1-401 SMEDRHHIQT HTNYLAMLDE VNYMNTFRKG GQLSPVCNGG IMTPPKSTEK 401 450 ENSP00000429089/1-404 PPGKH ENSBTAP00000006455/1-349 PPGKH ENSTTRP00000004407/1-404 PPGKH bmy_10571T0/1-405 PPGKH BACU018931/1-401 PPGKH