KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:38 2014 Check: 00 .. Name: ENSTTRP00000001492/1-456 Len: 487 Check: 9905 Weight: 1.00 Name: ENSP00000368984/1-456 Len: 487 Check: 7569 Weight: 1.00 Name: bmy_02483T0/1-438 Len: 487 Check: 7123 Weight: 1.00 Name: BACU004211/1-410 Len: 487 Check: 9249 Weight: 1.00 Name: ENSBTAP00000006502/1-440 Len: 487 Check: 8632 Weight: 1.00 // 1 50 ENSTTRP00000001492/1-456 MKETPLSNCE RRFLLRAIEE KKRLDGRQTY DYRNIKISFG TDYGCCIVEL ENSP00000368984/1-456 MKETPLSNCE RRFLLRAIEE KKRLDGRQTY DYRNIRISFG TDYGCCIVEL bmy_02483T0/1-438 ------MLC- ---------- LQRLDGRQTY DYRNIKISFG TDYGCCIVEL BACU004211/1-410 MKETPLSNCE RRFLLRAIEE KKRLDGRQTY DYRNIKISFG TDYGCCIVEL ENSBTAP00000006502/1-440 MKETPLSNCE RRFLLRAIEE KKRLDGRQTY DYRNIKISFG TDYGCCIVEL 51 100 ENSTTRP00000001492/1-456 GKTRVLGQVS CELVSPKLNR ATEGILFFNL ELSQMAAPAF EPGRQSDLLV ENSP00000368984/1-456 GKTRVLGQVS CELVSPKLNR ATEGILFFNL ELSQMAAPAF EPGRQSDLLV bmy_02483T0/1-438 GKTRVLGQVS CELVSPKLNR ATEGILFFNL ELSQMAAPAF EPGRQSDLLV BACU004211/1-410 GKTRVLGQVS CELVSPKLNR ATEGILFFNL ELSQMAAPAF EPGRQSDLLV ENSBTAP00000006502/1-440 GKTRVLGQVS CELVSPKLNR ATEGILFFNL ELSQMAAPAF EPGRQSDLLV 101 150 ENSTTRP00000001492/1-456 KLNRLLERCL RNSKCIDTES LCVVAGEK-- --------VW QIRVDLHLLN ENSP00000368984/1-456 KLNRLMERCL RNSKCIDTES LCVVAGEK-- --------VW QIRVDLHLLN bmy_02483T0/1-438 KLNRLLERCL RNSKCIDTES LCVVAGEKDL FLFRIHIQVW QIRVDLHLLN BACU004211/1-410 KLNRLLERCL RNSKCIDTES LCVVAGEK-- --------VW QIRVDLHLLN ENSBTAP00000006502/1-440 KLNRLLERCL RNSKCIDTES LCVVAGEK-- --------VW QIRVDLHLLN 151 200 ENSTTRP00000001492/1-456 HDGNIIDAAS IAAIVALCHF RRPDVSVQGD EVTL------ --------YT ENSP00000368984/1-456 HDGNIIDAAS IAAIVALCHF RRPDVSVQGD EVTL------ --------YT bmy_02483T0/1-438 HDGNIIDAAS IAAIVALCHF RRPDVSVQGD EVTL------ --------YT BACU004211/1-410 HDGNIIDAAS IAAIVALCHF RRPDVSVQGD EVTLKSVTVI TETFIFKQYT ENSBTAP00000006502/1-440 HDGNIIDAAS IAAIVALCHF RRPDVSVQGD EVTL------ --------YT 201 250 ENSTTRP00000001492/1-456 LEERDPVPLS IHHMPICVSF AFFQQGTYLL VDPNEREERV MDGLLVIAMN ENSP00000368984/1-456 PEERDPVPLS IHHMPICVSF AFFQQGTYLL VDPNEREERV MDGLLVIAMN bmy_02483T0/1-438 LEERDPVPLS IHHMPICVSF AFFQQGTYLL VDPNEREERV MDGLLVIAMN BACU004211/1-410 LEERDPVPLS IHHMPICVSF AFFQQGTYLL VDPNEREERV MDGLLVIAMN ENSBTAP00000006502/1-440 LEERDPVPLS IHHMPICVSF AFFQQGTYLL VDPSEREERV MDGLLVIAMN 251 300 ENSTTRP00000001492/1-456 KHREICTIQS SGGIMLLKDQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000368984/1-456 KHREICTIQS SGGIMLLKDQ VLRCSKIAGV KVAEITELIL KALENDQKVR bmy_02483T0/1-438 KHREICTIQS SGGIMLLKDQ VLXCSKIAGV KVAEITELXQ KALENDQKVR BACU004211/1-410 KHREICTIQS SGGIMLLKDQ VLRCSKIAGV KVAEITELIQ KALENDQKV- ENSBTAP00000006502/1-440 KHREICTIQS SGGIMLLKDQ VLRCSKIAGV KVVEITELIQ KALENDQKVR 301 350 ENSTTRP00000001492/1-456 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- ENSP00000368984/1-456 KEGGKFGFAE SIANQRITAF KMEKAPIDTS DVEEKAEEII AEAEPPSEV- bmy_02483T0/1-438 KEGGKFGFAE SIANQRITAF RMEKAPVDTS DVEEKAEEII SEAEPPSEVF BACU004211/1-410 ------SFLN LLS------- ---------- ---------- ---------- ENSBTAP00000006502/1-440 KEGGKFGFAE SMANQRITAF KMEKAPIDTS DVEEKAEEII SEAEPPSEV- 351 400 ENSTTRP00000001492/1-456 -----VSKPV LWTPGTAQIG EGIENSWGDL EDSEKEDEDE GGSDEAIILD ENSP00000368984/1-456 -----VSTPV LWTPGTAQIG EGVENSWGDL EDSEKED-DE GGGDQAIILD bmy_02483T0/1-438 LNLLSVSKPV LWTPGTAQIG EGIENSWGDL EDSEKEDEDE GGSDEAIILD BACU004211/1-410 -----VSKPV LWTPGTAQIG EGIENSWGDL EDSEKEDENE GGSDEAIILD ENSBTAP00000006502/1-440 -----VSKPV LWTPGTAQIG EGIENSWGHL EDSEKEDEDE GGSDEAIILD 401 450 ENSTTRP00000001492/1-456 SIKMDTG-EV SNIGSQXXXX XXXXXXXXXX XXXXAPIVLS DSEEEEMIIL ENSP00000368984/1-456 GIKMDTGVEV SDIGSQELGF HHVGQTGLEF LTSDAPIILS DSEEEEMIIL bmy_02483T0/1-438 SIKMDTG-EV SNIGSQ---- ---------- ---DAPIVLS DSEEEEMIIL BACU004211/1-410 SIKMDTG-EV SNIGSQ---- ---------- ---DAPIVLS DSEEEEMIIL ENSBTAP00000006502/1-440 GMKMDTGVEV SNIGSQ---- ---------- ---DAPIVLS DSEEEEMIIL 451 500 ENSTTRP00000001492/1-456 EPDKNPKKIR TQTISATQVK APSKKPVKKR KKKRAAN ENSP00000368984/1-456 EPDKNPKKIR TQTTSAKQEK APSKKPVKRR KKKRAAN bmy_02483T0/1-438 EPDKNPKKIR TQTISATQIK APSKKPVKKR KKKRAAN BACU004211/1-410 EPDKNPKKIR TQTISATQVK APSKKPVKKR KKKRAAN ENSBTAP00000006502/1-440 EPDKNPKKIR TQTISATQVK APSKKPVKKR KKKRAAN