KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:39 2014 Check: 00 .. Name: ENSP00000264499/1-715 Len: 715 Check: 6793 Weight: 1.00 Name: ENSBTAP00000006505/1-712 Len: 715 Check: 4095 Weight: 1.00 Name: BACU004209/1-454 Len: 715 Check: 6535 Weight: 1.00 Name: bmy_02485T0/1-654 Len: 715 Check: 1703 Weight: 1.00 Name: ENSTTRP00000001495/1-715 Len: 715 Check: 9424 Weight: 1.00 // 1 50 ENSP00000264499/1-715 MDLILNRMDY LQVGVTSQKT MKLIPASRHR ATQKVVIGDH DGVVMCFGMK ENSBTAP00000006505/1-712 ---MLFSSSV PFVGVTSQKT MKLLPASKHR ATQKVVVGDH DGIVMCFGMK BACU004209/1-454 ---------- ---------- --------MR ST-------- ---------- bmy_02485T0/1-654 MDLNLNRADY LQ-------- ---------- ----VVVGDH DGVVMCFGMK ENSTTRP00000001495/1-715 MDLNLNRADY LQVGVTSQKT MKLLPASRYR ATQKVVVGDH DGVVMCFGMK 51 100 ENSP00000264499/1-715 KGEAAAVFKT LPGPKIARLE LGGVINTPQE KIFIAAASEI RGFTKRGKQF ENSBTAP00000006505/1-712 KGEAVTVFKT LPGQKIARLE LGGALNTPQE KIFIAAGSEI RGFTKRGKQF BACU004209/1-454 ---------- ---------- ---------- ---------- ---------- bmy_02485T0/1-654 KGEAVTVFKT LPGQKIARLE LGGVLNTPQE KIFIAAGSEI RGFTKRGKQF ENSTTRP00000001495/1-715 KGEAVTVFKT LPGQKIARLE LGGVLNTPQE KIFIAAGSEI RGFTKRGKQF 101 150 ENSP00000264499/1-715 LSFETNLTES IKAMHISGSD LFLSASYIYN HYCDCKDQHY YLSGDKINDV ENSBTAP00000006505/1-712 LSFETNLTES IKAMHISGSD LFLSASYIYN HYCDCKDQHY YLSGDKINDV BACU004209/1-454 ---------- ---------- ---------- ----CPD--- ---------- bmy_02485T0/1-654 LSFETNLTES IKAMHISGSD LFLSASYIYN HYCDCKDQHY YLSGDKINDV ENSTTRP00000001495/1-715 LSFETNLTES IKAMHISGSD LFLSASYIYN HYCDCKDQHY YLSGDKINDV 151 200 ENSP00000264499/1-715 ICLPVERLSR ITPVLACQDR VLRVLQGSDV MYAVEVPGPP TVLALHNGNG ENSBTAP00000006505/1-712 ICLPVERLLR EVPVLACQDR VLRVLQGSDV TYEIEVPGPP TVLALHNGNG BACU004209/1-454 ---------- ---VWAVKLR F--------- ---------- ---------- bmy_02485T0/1-654 ICLPVERVLR DVPVLACQDR VLRVLQGSDV MYEIEVPGPP TVLALHNGNG ENSTTRP00000001495/1-715 ICLPVERVLR EVPVLACQDR VLRVLQGSDV MYEIEVPGPP TVLALHNGNG 201 250 ENSP00000264499/1-715 GDSGEDLLFG TSDGKLALIQ ITTSKPVRKW EIQNEKKRGG ILCIDSFDIV ENSBTAP00000006505/1-712 GDSGEDLLFG TSDGKLGLIQ ITTSKPIHKW EIRNEKKRGG ILCVDSFDIV BACU004209/1-454 GDSGEDLLYG TSDGKLGLIQ ITTSKPIHKW EIRNEKKRGG ILCIDSFDIV bmy_02485T0/1-654 GDSGEDLLYG TSDGKLGLIQ ITTSKPIH-- ---------- -----NFDIV ENSTTRP00000001495/1-715 GDSGEDLLFG TSDGKLGLIQ ITTSKAIHKW EIRNEKKRGG ILCIDSFDIV 251 300 ENSP00000264499/1-715 GDGVKDLLVG RDDGMVEVYS FDNANEPVLR FDQMLSESVT SIQGGCVGKD ENSBTAP00000006505/1-712 GDGVKDLLVG RDDGMVEVYG FDNANEPVLR FDHTLSESVT SIQGGCVGKD BACU004209/1-454 GDGVKNLLVG RDDGMVEVYS FDNANEPVLR FDQTLSESVT SIQGGCVGKD bmy_02485T0/1-654 GDGVKDLLVG RDDGMVEVYS FDNANEPVLR FDQTLSESVT SIQGGCVGKD ENSTTRP00000001495/1-715 GDGVKDLLVG RDDGMVEVYS FDNANEPVLR FDQTLSESVT SIQGGCVGKD 301 350 ENSP00000264499/1-715 SYDEIVVSTY SGWVTGLTTE PIHKESGPGE ELKINQEMQN KISSLRNELE ENSBTAP00000006505/1-712 GYDEIVVSTY SGWITGLTTE PVHKESGPGE ELKFNQEMQN KISSLRSELE BACU004209/1-454 GYDEIVVSTY SGWVTGLTTE PIHKESGPGE ELKINQEMQN KISSLRSELE bmy_02485T0/1-654 GYDEIVVSTY SGWVTGLTTE PIHKESGPGE ELKINQEMQN KISSLRSELE ENSTTRP00000001495/1-715 GYDEIVVSTY SGWVTGLTTE PIHKESGPGE ELKINQEMQN KISSLRSELE 351 400 ENSP00000264499/1-715 HLQYKVLQER ENYQQSSQSS KAKSAVPSFG INDKFTLNKD DASYSLILEV ENSBTAP00000006505/1-712 QLQYKVLQER EKYQQSSQSS KAKSAVPSFS VNDKFTLNKD DASYSLILEV BACU004209/1-454 HLQYKVLQER EKYQQSSQSS KAKSAVPSFS VNDKFTLNKD DASYSLILEV bmy_02485T0/1-654 HLQYKVLQER EKYQQSSQSS KAKSAVPSFS VNDKFTLNKD DASYSLILEV ENSTTRP00000001495/1-715 HLQYKVLQER EKYQQSSQSS KAKSAVPSFS VNDKFTLNKD DASYSLILEV 401 450 ENSP00000264499/1-715 QTAIDNVLIQ SDVPIDLLDV DKNSAVVSFS SCDSESNDNF LLATYRCQAD ENSBTAP00000006505/1-712 QTAIDNVLIQ SDVPIDLLDV DKNSAVVSFS SCDSESNDNF LLATYRCQAN BACU004209/1-454 QTAIDNVLIQ SDVPIDLLDV DKNSAVVSFS SCDSESNDNF LLATYRCQAN bmy_02485T0/1-654 QTAIDNVLIQ SDVPIDLLDV DKNSAVVSFS SCDSE----- ---------- ENSTTRP00000001495/1-715 QTAIDNVLIQ SDVPIDLLDV DKNSAVVSFS SCDSESNDNF LLATYRCQAN 451 500 ENSP00000264499/1-715 TTRLELKIRS IEGQYGTLQA YVTPRIQPKT CQVRQYHIKP LSLHQRTHFI ENSBTAP00000006505/1-712 TTRLELKIRS IEGQYGTLQA YVTPRIQPKT CQVRQYHIKP LSLHQRTHFI BACU004209/1-454 TTRLELKIRS IEGQYGTLQA YVTPRIQPKT CQARQYLIKP LSLHQRTHFI bmy_02485T0/1-654 -------IRS IEGQYGTLQA YVTPRIQPKT CQVRQYLIKP LSLHQRTHFI ENSTTRP00000001495/1-715 TTRLELKIRS IEGQYGTLQA YVTPRIQPKT CQVRQYLIKP LSLHQRTHFI 501 550 ENSP00000264499/1-715 DHDRPMNTLT LTGQFSFAEV HSWVVFCLPE VPEKPPAGEC VTFYFQNTFL ENSBTAP00000006505/1-712 DHDRPMNTLT LTGQFSFSEL HSWVVFCMPE VPEKPPAGEC VTFYFQNTFL BACU004209/1-454 DHDRPMNTLT LTGQFSFAEL HSWVVFCLPE VPEKPPAGEC VTFYFQNTFL bmy_02485T0/1-654 DHDRPMNTLT LTGQFSFAEL HSWVVFCLPE VPEKPPAGEC VTFYFQNTFL ENSTTRP00000001495/1-715 DHDRPMNTLT LTGQFSFAEL HSWVVFCLPE VPEKPPAGEC VTFYFQNTFL 551 600 ENSP00000264499/1-715 DTQLESTYRK GEGVFKSDNI STISILKDVL SKEATKRKIN LNISYEINEV ENSBTAP00000006505/1-712 DTQLESTYRK GEGVFKSDNI STISILKDVL SKEATKRKIN LNISYEINEV BACU004209/1-454 DTQLESTYRK GEGVFKSDNI STISILKDVL SKEATKRKIN LNISY----- bmy_02485T0/1-654 DTQLESTYRK GEGVFKSDNI STISILKDVL SKEATKRKIN LNISYEINEI ENSTTRP00000001495/1-715 DTQLESTYRK GEGVFKSDNI STISILKDVL SKEATKRKIN LNILYEINEV 601 650 ENSP00000264499/1-715 SVKHTLKLIH PKLEYQLLLA KKVQLIDALK ELQIHEGNTN FLIPEYHCIL ENSBTAP00000006505/1-712 SVKHTLKLIH PKLEYQLLLA KKVQLIDALK ELQVHEGNTN FLIPEYRCIL BACU004209/1-454 ---------- ---------- ---------- ---------- ---------- bmy_02485T0/1-654 SVKHTLKLIH PKLEYQLLLA KKVQLIDALK ELQVHEGNTN FLIPEYRCIL ENSTTRP00000001495/1-715 SVKHTLKLIH PKLEYQLLLA KKVQLIDALK ELQVHEGNTN FLIPEYRCIL 651 700 ENSP00000264499/1-715 EEADHLQEEY KKQPAHLERL YGMITDLFID KFKFKGTNVK TKVPLLLEIL ENSBTAP00000006505/1-712 EEADHLQEEY KKQPAHLERL YGMITDLFID KFKFKGTNVK TKVPLLLEIL BACU004209/1-454 ---------- ---------- -GMITDLFID KFKFKGTNVK TKVPLLLEIL bmy_02485T0/1-654 EEADHLQEEY KKQPAHLERL YGMITDLFID KFKFKGTNVK TKVPLLLEIL ENSTTRP00000001495/1-715 EEADHLQEEY KKQPAHLERL YGMITDLFID KFKFKGTNVK TKVPLLLEIL 701 750 ENSP00000264499/1-715 DSYDQNALIS FFDAA ENSBTAP00000006505/1-712 DSYDQNALIA FFDAA BACU004209/1-454 DSYDQNALIA FFDAA bmy_02485T0/1-654 DSYDQNALIA FFDAA ENSTTRP00000001495/1-715 DGYDQNALIA FFDAA