KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:40 2014 Check: 00 .. Name: ENSBTAP00000006513/1-474 Len: 514 Check: 6886 Weight: 1.00 Name: ENSP00000356115/1-514 Len: 514 Check: 1840 Weight: 1.00 Name: ENSTTRP00000003589/1-432 Len: 514 Check: 8834 Weight: 1.00 Name: bmy_02385T0/1-512 Len: 514 Check: 7061 Weight: 1.00 Name: BACU009876/1-477 Len: 514 Check: 9417 Weight: 1.00 // 1 50 ENSBTAP00000006513/1-474 ---------- ---------- ---------- -----GPTLL DLRCQTRSSL ENSP00000356115/1-514 MGCDGRVSGL LRRNLQPTLT YWSVFFSFGL CIAFLGPTLL DLRCQTHSSL ENSTTRP00000003589/1-432 ---------- ---------- ---------- ---------- ---------- bmy_02385T0/1-512 MGCDVRVSGL LRRNLQPTLT YWSVFFSFGL CIAFLGPTLL DLRCQTHSSL BACU009876/1-477 ---------- ---------- ---------- -----GPTLL DLRCQTHSSL 51 100 ENSBTAP00000006513/1-474 PEISWVFFSQ QFCLLLGSAL GGVFKRTLAQ SLWALFTSSL AISLVFATIP ENSP00000356115/1-514 PQISWVFFSQ QLCLLLGSAL GGVFKRTLAQ SLWALFTSSL AISLVFAVIP ENSTTRP00000003589/1-432 ---------- ---------- -------LAQ SLWALFTSSL AISLVFAAIP bmy_02385T0/1-512 PQISWVFFSQ QLCLLLGSAL GGVFKRTLAQ SLWALFTSSL AISLVFAAIP BACU009876/1-477 PQISWVFFSQ QLCLLLGSAL GGVFKRTLAQ SLWALFTSSL AISLVFAAIP 101 150 ENSBTAP00000006513/1-474 FCRDVEVLAS VMALAGLAMG CIDTVANMQL VRIYQKDSAV FLQVLHFFVG ENSP00000356115/1-514 FCRDVKVLAS VMALAGLAMG CIDTVANMQL VRMYQKDSAV FLQVLHFFVG ENSTTRP00000003589/1-432 FCRDVKVLAS VMALAGLAMG CIDTVANMQL VRIYQKDSAV FLQVLHFFVG bmy_02385T0/1-512 FCRDVKVLAS VMALAGLAMG CIDTVANMQL VRIYQKDSAV FLQVLHFFVG BACU009876/1-477 FCRDVKVLAS VMALAGLAMG CIDTVANMQL VRIYQKDSAV FLQVLHFFVG 151 200 ENSBTAP00000006513/1-474 FGALLSPLIA DPFLSEANCL PANSTANATS ---VFHASRV LGRQHPEAQP ENSP00000356115/1-514 FGALLSPLIA DPFLSEANCL PANSTANTTS RGHLFHVSRV LGQHHVDAKP ENSTTRP00000003589/1-432 FGALLSPLIA DPFLSEANCL PTNRTANATS GSHLLHASRV LAHHHTGAQP bmy_02385T0/1-512 FGALLSPLIA DPFLSEASCL PTNRTANATS GSHLLHASRV LAHHHTGAQP BACU009876/1-477 FGALLSPLIA DPFLSEASCL PTNRTANATS GSHLLHASRV LAHHHTGAQR 201 250 ENSBTAP00000006513/1-474 RSNRTLPGLP SQDGAGTRVS YAFWIMALIN LPVPLAVLHL LSKERLLACC ENSP00000356115/1-514 WSNQTFPGLT PKDGAGTRVS YAFWIMALIN LPVPMAVLML LSKERLLTCC ENSTTRP00000003589/1-432 WSNQT---LT PQDGAGARVS YAFWIMALIN LPVPMAVLYL LSKERLLTCC bmy_02385T0/1-512 WSNQTLPGLT PQDGAGARVS YAFWIMALIN LPVPMAVLYL LSKERLLTCC BACU009876/1-477 WSNQTLPGLT PQDGAGARVS YAFWIMALIN LPVPMAVLYL LSKERLLTCC 251 300 ENSBTAP00000006513/1-474 PQRRPLLLSA DELTLETQPP EKEDASSLSP KF--HPGHED LFSCCQRKNF ENSP00000356115/1-514 PQRRPLLLSA DELALETQPP EKEDASSLPP KFQSHLGHED LFSCCQRKNL ENSTTRP00000003589/1-432 PQRRPLLLSA DELTLETQPP EKEDTSSLPP KF--HPGHED LFRCCQRKNF bmy_02385T0/1-512 PQRRPLLLSA DELTLETQPP EKEDTSSLPP KF--HPGHED LFSCCQRKNF BACU009876/1-477 PQRRPLLLSA DELTLETQPP EKEDTSSLPP KF--HPGHED LFSCCQRKNF 301 350 ENSBTAP00000006513/1-474 RGVPSSFFAI HITAALVLFM TDGLTGAYSA FVYSYAVEKP LSVGHKVAGY ENSP00000356115/1-514 RGAPYSFFAI HITGALVLFM TDGLTGAYSA FVYSYAVEKP LSVGHKVAGY ENSTTRP00000003589/1-432 KGVPSSFFAI HITAALVLFM TDGLTGAYSA FVYSYAVEKP LSVGHKVAGY bmy_02385T0/1-512 KGVPSSFFAI HITAALVLFM TDGLTGAYSA FVYSYAVEKP LSVGHKVAGY BACU009876/1-477 KGVPSSFFAI HITAALVLFM TDGLTGAYSA FVYSYAVEKP LSVGHKVAGY 351 400 ENSBTAP00000006513/1-474 LPSLFWGFIT LGRLISIPVS SRVKPVTMVF INVVGVVATY LVLLVFSHNV ENSP00000356115/1-514 LPSLFWGFIT LGRLLSIPIS SRMKPATMVF INVVGVVVTF LVLLIFSYNV ENSTTRP00000003589/1-432 LPSLFWGFIT LGRLISIPIS SRVKPATMVF VNVVGVVVTF LVLFVFSYKV bmy_02385T0/1-512 LPSLFWGFIT LGRLISIPIS SRVKPATMVF VNVVGVVVTF LVLLVFSYNV BACU009876/1-477 LPSLFWGFIT LGRLISIPIS SRVKPATMVF VNVVGVVVTF LVLLVFSYNV 401 450 ENSBTAP00000006513/1-474 VFLFVGTASL GLSLSSTFPS MLAYTEDVLQ YRGCATTVLV TGAGIGEMVL ENSP00000356115/1-514 VFLFVGTASL GLFLSSTFPS MLAYTEDSLQ YKGCATTVLV TGAGVGEMVL ENSTTRP00000003589/1-432 VFLFVGTTSL GLFLSSTFPS KLAYNEDILQ YKGCATTVLV TGAGVGEMAL bmy_02385T0/1-512 VFLFVGTASL GLFLSSTFPS MLAYTEDILQ YRGCATTVLV TGAGVGEMAL BACU009876/1-477 VFLFVGTASL GLFLSSTFPS MLAYTEDILQ YRGCATTVLV TGAGVGEMAL 451 500 ENSBTAP00000006513/1-474 QMLVGSIFQA QGSYSFLVCG VIFGGLAFTF YILLLFFHRM HPGLSSGPTR ENSP00000356115/1-514 QMLVGSIFQA QGSYSFLVCG VIFGCLAFTF YILLLFFHRM HPGLPSVPTQ ENSTTRP00000003589/1-432 QMLVGSVFQA RGSYSFLVCG VIFGGLAFTF YILLLFFHRM HPGLSSVPTQ bmy_02385T0/1-512 QMLVGSIFQA QGSYSFLVCG VIFGGLAFTF YILLLFFHRM HPGLSSVPTQ BACU009876/1-477 QMLVGSIFQA QGSYSFLVCG VIFGGLAFTF YILLLFFHRM HPGLSSVPTQ 501 550 ENSBTAP00000006513/1-474 DKALGMESLE SYQR ENSP00000356115/1-514 DRSIGMENSE CYQR ENSTTRP00000003589/1-432 DKALGMESLE CYQR bmy_02385T0/1-512 DKALGMESLE CYQR BACU009876/1-477 DKALGMESLE CYQR