KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:45 2014 Check: 00 .. Name: ENSTTRP00000014044/1-256 Len: 291 Check: 763 Weight: 1.00 Name: bmy_20280T0/1-268 Len: 291 Check: 6710 Weight: 1.00 Name: BACU020251/1-258 Len: 291 Check: 5396 Weight: 1.00 Name: ENSP00000337500/1-256 Len: 291 Check: 2936 Weight: 1.00 Name: ENSBTAP00000006533/1-255 Len: 291 Check: 1327 Weight: 1.00 // 1 50 ENSTTRP00000014044/1-256 MATQRKHLVK DFNPYI---- ---TCYICKG YLIKPTTVTE CLHTXXXXXX bmy_20280T0/1-268 MATQRKHLVK DFNPYINPYI SIFTCYICRG YLIKPTTVTE CLHTFCKTCI BACU020251/1-258 MATQRKHLVK DFNPYI---- ---ICCIYKG YLIKPTTVTE CLHTFCKTCI ENSP00000337500/1-256 MATQRKHLVK DFNPYI---- ---TCYICKG YLIKPTTVTE CLHTFCKTCI ENSBTAP00000006533/1-255 MATQRKHLVK DFNPYI---- ---TCYICKG YLIKPTTVTE CLHTFCKTCI 51 100 ENSTTRP00000014044/1-256 XXXXXXXXXX XXXXXXXXXX XXXXXXXLDN TLEEIIFKLV PXXXXQELER bmy_20280T0/1-268 VQHFEDSNDC PRCGNQVHGT NPLEMLKLDN TLEEIIFKF- ---------- BACU020251/1-258 VQHFEDSNGC PRCGNQVHET NPLERLSLDN TLEEIIFKLV PGLQEQELER ENSP00000337500/1-256 VQHFEDSNDC PRCGNQVHET NPLEMLRLDN TLEEIIFKLV PGLREQELER ENSBTAP00000006533/1-255 VQHFEDSNDC PRCGNQVHET NPLEMLRLDN TLEEIIFKLV PGLREQ-LER 101 150 ENSTTRP00000014044/1-256 ESEFWKKNKP QENGQDDTSK VDKPKVDEEG DENQDDKDYH RS------DP bmy_20280T0/1-268 ------KNKP QENGQDNTSK VDKPEVDEEG DENQDDKDYH RS------DP BACU020251/1-258 --EFWKKNKP QENEHDDTSK VDKPKVDEEG DENQDDKDYH RASLVAQIDP ENSP00000337500/1-256 ESEFWKKNKP QENGQDDTSK ADKPKVDEEG DENEDDKDYH RS------DP ENSBTAP00000006533/1-255 ESEFWKKNKP QENGQDDMSK VDKPKVDEEG DENQDDKDYH RS------DP 151 200 ENSTTRP00000014044/1-256 QIAICLDCLR NNGQSGDNVV KGLMKKFIRC STRVTVGTIK KFLSLKLKLP bmy_20280T0/1-268 QIAICLDCLR NNGQSGDNVV KGLMKKFIWC STHVTVGTIK KFLSLKLKLP BACU020251/1-258 QIAICLDCLR NNGQS-DNAV KGLMKEFIRF STR-TVGTIK KFLSLKLKLP ENSP00000337500/1-256 QIAICLDCLR NNGQSGDNVV KGLMKKFIRC STRVTVGTIK KFLSLKLKLP ENSBTAP00000006533/1-255 QIAICLDCLR NNGQSGDNVV KGLMKKFIRC STRVTVGTIK KFLSLKLKLP 201 250 ENSTTRP00000014044/1-256 SSYELDVLCN GEIMGKDHTM EFIYMTRWRL RGEXFRCLNC SASQVCPQDG bmy_20280T0/1-268 SSYELDVLCH GEIMGKDHTM EFIYMTRWRL RGKNFRCLNC SASQVCPQDG BACU020251/1-258 SSYELDVLCN GEIMGKDHTV EFIDMRRWRL RDENFRCLNC SASQVCPQDG ENSP00000337500/1-256 SSYELDVLCN GEIMGKDHTM EFIYMTRWRL RGENFRCLNC SASQVCSQDG ENSBTAP00000006533/1-255 SSYELDVLCN GEIMGKDHTM EFIYMTRWRL RGENFRCLNC SASQVCSQDG 251 300 ENSTTRP00000014044/1-256 PLYQSYPMVL QY-------- --RPR----- -------IDF G bmy_20280T0/1-268 PLYQSYPHTP WYCSIDQELI LVRPRGLDPT ERILHYVFTH R BACU020251/1-258 PLYQSYPMVL QY-------- --RPR----- -------TNF G ENSP00000337500/1-256 PLYQSYPMVL QY-------- --RPR----- -------IDF G ENSBTAP00000006533/1-255 PLYQSYPMVL QY-------- --RPR----- -------IDF G