KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:29:54 2014 Check: 00 .. Name: ENSP00000349770/1-514 Len: 549 Check: 7313 Weight: 1.00 Name: ENSBTAP00000006567/1-499 Len: 549 Check: 8684 Weight: 1.00 Name: bmy_08083T0/1-529 Len: 549 Check: 5770 Weight: 1.00 Name: BACU006811/1-517 Len: 549 Check: 5089 Weight: 1.00 // 1 50 ENSP00000349770/1-514 ---------- ----MNQSIP VAPTPPRRVR LKPWLVAQVN SCQYPGLQWV ENSBTAP00000006567/1-499 ---------- ----MNQPAP AALLPPRRVR LKPWLVAQVN SCQYPGLQWV bmy_08083T0/1-529 ---MALWRGA YAFAMNQPAP AALPPPRRVR LKPWLVAQVN SCQYPGLQWV BACU006811/1-517 MENQVLLPAA DAFAMNQPAP AALPPPRRVR LKPWLVAQVN SCQYPGLQWV 51 100 ENSP00000349770/1-514 NGEKKLFCIP WRHATRHGPS QDGDNTIFKA WAKETGKYTE GVDEADPAKW ENSBTAP00000006567/1-499 NGEKKLFYIP WRHATRHGPS HDGDNTIFKA WAKETGKYTE GVDEADPAKW bmy_08083T0/1-529 NGEKKCFYIP WRHATRHGPS QDGDNTIFKA WAKETGKYTE GVDEADPAKW BACU006811/1-517 NGEKKCFYIP WRHATRHGPS QDGDNTIFKA WAKETGKYTE GVDEADPAKW 101 150 ENSP00000349770/1-514 KANLRCALNK SRDFRLIYDG PRDMPPQPYK IYEVCSNGPA PTDSQPPEDY ENSBTAP00000006567/1-499 KANLRCALNK SRDFRLIYDG PRDMPPQPYK VYEVCSNGPA PAESQPSEDN bmy_08083T0/1-529 KANLRCALNK SRDFRLIYDG PRDMPPQPYK IYEVCSNGPT PAESQPSEDY BACU006811/1-517 KANLRCALNK SRDFRLIYDG PRDMPPQPYK IYEVCSNGPT PAESQPSEDY 151 200 ENSP00000349770/1-514 SFGAGE-EEE EEEELQRMLP SLSLTDAVQS GPHMTPYSLL KEDVKWPPTL ENSBTAP00000006567/1-499 A------EEE EEEELQKMLP GLSITEAVQP GPAMAPYSLP KEDVKWP--- bmy_08083T0/1-529 ALGAGEEEEE EEEELQRMLP SLSLTEAVQP GPPIAPYSLP KEBVKWP--- BACU006811/1-517 TLGAGEEEEE EEEELQRMLP SLSLTEAVQP GPPMAPYSLP KEDVKWP--- 201 250 ENSP00000349770/1-514 QPPTLRPPTL QPPTLQPPVV LGPPAPDPSP LAPPPGNPAG FRELLSEVL- ENSBTAP00000006567/1-499 ---------- --PTLQPPVV LAPPAPGPNL LVPAPGNAAD FGEVFSEVLP bmy_08083T0/1-529 ---------- --PTLQPPVV LGAPAPDPSL LGPAPGNPAD FGELLSEVLP BACU006811/1-517 ---------- --PTLQPPVV LGPPAPDPSL LGPAPGNPAD FGELLSEVLP 251 300 ENSP00000349770/1-514 ----EPGPLP ASLPPAGEQL LPDLLISPHM LP-------- -------LTD ENSBTAP00000006567/1-499 SSQPQPGSLS TSLAPTGEQL LPDLLISPHM LP-------- -------LTD bmy_08083T0/1-529 S--PQPGTLA ASLPPTGEQL LPDLLISPHM LPRKDPGGLR REKQRWEVTD BACU006811/1-517 S--PQPGTLA ASLTPTGEQL LPDLLISPHM LP-------- -------LTD 301 350 ENSP00000349770/1-514 LEIKFQYRGR PPRALTISNP HGCRLFYSQL EATQEQVELF GPISLEQVRF ENSBTAP00000006567/1-499 LEIKFQYRGR PPRALTISNP QGCRLFYSQL EATQEQVELF GPVSLEQVRF bmy_08083T0/1-529 LEIKFQYRGR PPRALTISNP HGCRLFYSQL EATQEQVELF GPVSLEQVRF BACU006811/1-517 LEIKFQYRGR PPRALTISNP HGCRLFYSQL EATQEQVELF GPVSLEQVRF 351 400 ENSP00000349770/1-514 PSPEDIPSDK QRFYTNQLLD VLDRGLILQL QGQDLYAIRL CQCKVFWSGP ENSBTAP00000006567/1-499 PSPEDIPSEK QRFYTNQLLD VLDRGLILQL QGQDLYAIRL CQCKVFWSGP bmy_08083T0/1-529 PSPEDIPSDK QRFYTNQLLD VLDRGLILQL QGQDLYAIRL CQCKVFWSGP BACU006811/1-517 PSPEDIPSDK QRFYTNQLLD VLDRGLILQL QGQDLYAIRL CQCKVFWSGP 401 450 ENSP00000349770/1-514 CASAHDSCPN PIQREVKTKL FSLEHFLNEL ILFQKGQTNT PPPFEIFFCF ENSBTAP00000006567/1-499 CASAQGSHPN PIQREVKTKL FSLEDFLNEL ILFQKGQTNT PPPFEIFFCF bmy_08083T0/1-529 CASAHGLHPN PIQREVKTKL FSLEHFLNEL ILFQKGQTNT PPPFEIFFCF BACU006811/1-517 CASAHGSHPN PIQREVKTKL FSLEHFLNEL ILFQKGQTNT PPPFEIFFCF 451 500 ENSP00000349770/1-514 GEEWPDRKPR EKKLITVQVV PVAARLLLEM FSGELSWSAD SIRLQISNPD ENSBTAP00000006567/1-499 GEEWPDCKPR EKKLITVQVV PVAARMLLEM FSGELSWSAD SIRLQISNPD bmy_08083T0/1-529 GEEWPDRKPR EKKLITVQVV PVAARLLLEM FSGELSWSAD SIRLQISNPD BACU006811/1-517 GEEWPDRKPR EKKLITVQVV PVAARLLLEM FSGELSWSAD SIRLQISNPD 501 550 ENSP00000349770/1-514 LKDRMVEQFK ELHHIWQSQQ RLQPVAQAPP GAGLGVGQGP WPMHPAGMQ ENSBTAP00000006567/1-499 LKDRMVEQFK ELHHIWLSQQ HLQPVAQTPA MPGLSAAQGP WPMHPVGMQ bmy_08083T0/1-529 LKDRMVEQFK ELHHIWQSQQ QLQPVAQAPP VAGLSAGQGP WPMHPVGMQ BACU006811/1-517 LKDRMVEQFK ELHHIWQSQQ QLQPVAQAPP VAGLSAGQGP WPMHPVGMQ