KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:29:58 2014 Check: 00 .. Name: ENSTTRP00000013862/1-968 Len: 1209 Check: 4977 Weight: 1.00 Name: bmy_08081T0/1-930 Len: 1209 Check: 5772 Weight: 1.00 Name: BACU006810/1-1084 Len: 1209 Check: 1503 Weight: 1.00 Name: ENSP00000265388/1-923 Len: 1209 Check: 7549 Weight: 1.00 Name: ENSBTAP00000006573/1-923 Len: 1209 Check: 7332 Weight: 1.00 // 1 50 ENSTTRP00000013862/1-968 ---------- ---------- ---------- ---------- ---------- bmy_08081T0/1-930 ---------- ---------- ---------- ---------- ---------- BACU006810/1-1084 MMRALGLFME RGPGVWIQQH GTRAEIHDLY SPSYSPSPSH QFEFALQVKL ENSP00000265388/1-923 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006573/1-923 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013862/1-968 ---------- ---------- ---------- ---------- ---------- bmy_08081T0/1-930 ---------- ---------- ---------- ---------- ---------- BACU006810/1-1084 GGNLATTEGS SELKNQTKEG DILSTTVDTP QMVELMRLVH GGPKGVYVEE ENSP00000265388/1-923 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006573/1-923 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013862/1-968 ---------- ---------- ---------- ---------- ---------- bmy_08081T0/1-930 ---------- ---------- ---------- ---------- ---------- BACU006810/1-1084 WRSRKGEERP RIHCQGEESC TGGNFHGEPL CPGNGQRGDG ASQGAAVADK ENSP00000265388/1-923 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006573/1-923 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000013862/1-968 ---------- ---------- --------ME GAKPTLQLVY QAVQALYHDP bmy_08081T0/1-930 ---------- ---------- --------ME GAKPTLQLVY QAVQALYHDP BACU006810/1-1084 VRKREGRAAG EASGENTGAI AAATTATTME GAKPTLQLVY QAVQALYHDP ENSP00000265388/1-923 ---------- ---------- --------ME GAKPTLQLVY QAVQALYHDP ENSBTAP00000006573/1-923 ---------- ---------- --------ME GAKPTLQLVY QAVQALYHDP 201 250 ENSTTRP00000013862/1-968 DPSGKERASF WLGELQRS-- ---------- ---------- ---------- bmy_08081T0/1-930 DPSGKERASF WLGELQRSEN IELLLIAKAK YIFKTKQNQG SNWVVWHKRC BACU006810/1-1084 DPSGKERASF WLGELQRS-- ---------- ---------- ---------- ENSP00000265388/1-923 DPSGKERASF WLGELQRS-- ---------- ---------- ---------- ENSBTAP00000006573/1-923 DPSGKERASF WLGELQRS-- ---------- ---------- ---------- 251 300 ENSTTRP00000013862/1-968 ---------- ------VHAW EISDQLLQIR QDVESCYFAA QTMKMKIQTS bmy_08081T0/1-930 LEKQFLRLFF CLIYFQVHAW EISDQLLQIR QDVESCYFAA QTMKMKIQTS BACU006810/1-1084 ---------- ------VHAW EISDQLLQIR QDVESCYFAA QTMKMKIQTS ENSP00000265388/1-923 ---------- ------VHAW EISDQLLQIR QDVESCYFAA QTMKMKIQTS ENSBTAP00000006573/1-923 ---------- ------VHAW EISDQLLQIR QDVESCYFAA QTMKMKIQTS 301 350 ENSTTRP00000013862/1-968 FYELPTDSHA SLRDSLLTHI QNLKDLSPVI VTQLALAIAD LALQMPSWKG bmy_08081T0/1-930 FYELPTDSHA SLRDSLLTHI QNLKDLSPVI VTQLALAIAD LALQMPSWKG BACU006810/1-1084 FYELPTDSHA SLRDSLLTHI QNLKDLSPVI VTQLALAIAD LALQMPSWKG ENSP00000265388/1-923 FYELPTDSHA SLRDSLLTHI QNLKDLSPVI VTQLALAIAD LALQMPSWKG ENSBTAP00000006573/1-923 FYELPTDSHA SLRDSLLTHI QNLKDLSPVI VTQLALAIAD LALQMPSWKG 351 400 ENSTTRP00000013862/1-968 CVQTLVEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08081T0/1-930 CVQTLVEKYS NDVTSLPFLL EILTVLPEEV HSRSLRIGAN RRTEIIEDLA BACU006810/1-1084 CVQTLVEKYS NDVTSLPFLL EILTVLPEEV HSRSLRIGAN RRTEIIEDLA ENSP00000265388/1-923 CVQTLVEKYS NDVTSLPFLL EILTVLPEEV HSRSLRIGAN RRTEIIEDLA ENSBTAP00000006573/1-923 CVQTLVEKYS NDVTSLPFLL EILTVLPEEV HSRSLRIGAN RRTEIIEDLA 401 450 ENSTTRP00000013862/1-968 XXXXXXXXXX MTCVEKAGTD EKMLMKVFRC LGSWFNLGVL DSNFMANNKL bmy_08081T0/1-930 FYSSTVVSLL MTCVEKAGTE EKMLMKVFRC LGSWFNLGVL DSNFMANNKL BACU006810/1-1084 FYSSTVVSLL MTCVEKAGTE EKMLMKVFRC LGSWFNLGVL DSNFMANNKL ENSP00000265388/1-923 FYSSTVVSLL MTCVEKAGTD EKMLMKVFRC LGSWFNLGVL DSNFMANNKL ENSBTAP00000006573/1-923 FYSSTVVSLL MTCVEKAGTD EKMLMKVFRC LGSWFNLGVL DSNFMANNKL 451 500 ENSTTRP00000013862/1-968 LALLFEVL-- ---------- ---QQDKTSS NLHEAASDCV CSALYAIENV bmy_08081T0/1-930 LALLFEVLLN DQTSYFPTPA TSQQQDKTSS NLHEAASDCV CSALYAIENV BACU006810/1-1084 LALLFEVL-- ---------- ---QQDKTSS NLHEAASDCV CSALYAIENV ENSP00000265388/1-923 LALLFEVL-- ---------- ---QQDKTSS NLHEAASDCV CSALYAIENV ENSBTAP00000006573/1-923 LALLFEVL-- ---------- ---QQDKTSS NLHEAASDCV CSALYAIENV 501 550 ENSTTRP00000013862/1-968 ETNLPLAMQL FQGVLTLETA YHMAVAREDL DKVLNYCRIF TELCETFLEK bmy_08081T0/1-930 ETNLPLAMQL FQGVLTLETA YHMAVAREDL DKVLNYCRIF TELCETFLEK BACU006810/1-1084 ETNLPLAMQL FQGVLTLETA YHMAVAREDL DKVLNYCRIF TELCETFLEK ENSP00000265388/1-923 ETNLPLAMQL FQGVLTLETA YHMAVAREDL DKVLNYCRIF TELCETFLEK ENSBTAP00000006573/1-923 ETNLALAMQL FQGVLTLETA YHMAVAREDL DKVLNYCRIF TELCETFLEK 551 600 ENSTTRP00000013862/1-968 IVCTPGQGLG DLRTLELLLI CAGHPQYEVV EISFNFWYRL GEHLYKTNDE bmy_08081T0/1-930 IVCTPGQGLG DLRTLELLLI CAGHPQYEVV EISFNFWYRL GEHLYKTNDE BACU006810/1-1084 IVCTPGQGLG DLRTLELLLI CAGHPQYEVV EISFNFWYRL GEHLYKTNDE ENSP00000265388/1-923 IVCTPGQGLG DLRTLELLLI CAGHPQYEVV EISFNFWYRL GEHLYKTNDE ENSBTAP00000006573/1-923 IVCTPGQGLG DLRTLELLLI CAGHPQYEVV EISFNFWYRL GEHLYKTNDE 601 650 ENSTTRP00000013862/1-968 VIHGIFKAYI QRLLHALARH CQLEPDHEGV PEETDDFGEF RMRVSDLVKD bmy_08081T0/1-930 VIHGIFKAYI QRLLHALARH CQLEPDHEGV PEETDDFGEF RMRVSDLVKD BACU006810/1-1084 VIHGIFKAYI QRLLHALARH CQLEPDHEGV PEETDDFGEF RMRVSDLVKD ENSP00000265388/1-923 VIHGIFKAYI QRLLHALARH CQLEPDHEGV PEETDDFGEF RMRVSDLVKD ENSBTAP00000006573/1-923 VIHGIFKAYI QRLLHALARH CQLEPDHEGV PEETDDFGEF RMRVSDLVKD 651 700 ENSTTRP00000013862/1-968 LIFLIGSMEC FAQLYSTLKE GNPPWEVTEA VLFIMAAIAK SVDPKKPFSN bmy_08081T0/1-930 LIFLIGSMEC FAQLYSTLKE GNPPWEVTEA VLFIMAAIAK SVDP------ BACU006810/1-1084 LIFLIGSMEC FAQLYSTLKE GNPPWEVTEA VLFIMAAIAK SVDP------ ENSP00000265388/1-923 LIFLIGSMEC FAQLYSTLKE GNPPWEVTEA VLFIMAAIAK SVDP------ ENSBTAP00000006573/1-923 LIFLIGSMEC FAQLYSTLKE GNPPWEVTEA VLFIMAAIAK SVDP------ 701 750 ENSTTRP00000013862/1-968 DLCHCSLFFS QNLTSEIGNS EYLPSKLREN NPTLVEVLEG VVRLPETVHT bmy_08081T0/1-930 ---------- ---------- --------EN NPTLVEVLEG VVRLPETVHT BACU006810/1-1084 ---------- ---------- --------EN NPTLVEVLEG VVRLPETVHT ENSP00000265388/1-923 ---------- ---------- --------EN NPTLVEVLEG VVRLPETVHT ENSBTAP00000006573/1-923 ---------- ---------- --------EN NPTLVEVLEG VVRLPETVHT 751 800 ENSTTRP00000013862/1-968 AVRYTSIELV GEMSEVVDRN PQFLDPVLGY LMKGLCEKPL ASAAAKAIHN bmy_08081T0/1-930 AVRYTSIELV GEMSEVVDRN PQFLDPVLGY LMKGLCEKPL ASAAAKAIHN BACU006810/1-1084 AVRYTSIELV GEMSEVVDRN PQFLDPVLGY LMKGLCEKPL ASAAAKAIHN ENSP00000265388/1-923 AVRYTSIELV GEMSEVVDRN PQFLDPVLGY LMKGLCEKPL ASAAAKAIHN ENSBTAP00000006573/1-923 AVRYTSIELV GEMSEVVDRN PQFLDPVLGY LMKGLCEKPL ASAAAKAIHN 801 850 ENSTTRP00000013862/1-968 ICSVCRDHMA QHFHGLLEIA RSLDSFMLSP EAAVGLLKGT ALVLARLPLD bmy_08081T0/1-930 ICSVCRDHMA QHFHGLLEIA RSLDSFMLSP EAAVGLLK-- -------EWE BACU006810/1-1084 ICSVCRDHMA QHFHGLLEIA RSLDSFMLSP EAAVGLLKGT ALVLARLPLD ENSP00000265388/1-923 ICSVCRDHMA QHFNGLLEIA RSLDSFLLSP EAAVGLLKGT ALVLARLPLD ENSBTAP00000006573/1-923 ICSVCRDHMA QHFNGLLEIA RSLDSFMLSP EAAVGLLKGT ALVLARLPLD 851 900 ENSTTRP00000013862/1-968 KITECLSELC SVQVMALKKL LSQEPSNGIS SDPTVFLDRL AVIFRHTNPI bmy_08081T0/1-930 K--------- --KVLSLKNT L--------- ----VFFNW- -----HTNPI BACU006810/1-1084 KITECLSELC SVQVMALKKL LSQEPSNGIS SDPTVFLDRL AVIFRHTNPI ENSP00000265388/1-923 KITECLSELC SVQVMALKKL LSQEPSNGIS SDPTVFLDRL AVIFRHTNPI ENSBTAP00000006573/1-923 KITECLSELC SVQVLALKKL LSQEPSNGIS SDPTVFLDRL AVIFRHTNPV 901 950 ENSTTRP00000013862/1-968 VENGQTHPCQ KVIQEIWPVL SETLNKHRAD NRIVERCCRC LRFAVRCVGK bmy_08081T0/1-930 VENGQTHPCQ KVIQEIWPVL SETLNKHRAD NRIVERCCRC LRFAVRCVGK BACU006810/1-1084 VENGQTHPCQ KVIQEIWPVL SETLNKHRAD NRIVERCCRC LRFAVRCVGK ENSP00000265388/1-923 VENGQTHPCQ KVIQEIWPVL SETLNKHRAD NRIVERCCRC LRFAVRCVGK ENSBTAP00000006573/1-923 VENGQTHPCQ KVIQEIWPIL SETLNKHRAD NRIVERCCRC LRFAVRCVGK 951 1000 ENSTTRP00000013862/1-968 GSAALLQPLV TQMVNVYHVH QHSCFLYLGS ILVDEYGMEE GCRQGLLDML bmy_08081T0/1-930 GSAALLQPLV TQMVNVYHVH QHSCFLYLGS ILVDEYGMEE GCRQGLLDML BACU006810/1-1084 GSAALLQPLV TQMVNVYHVH QHSCFLYLGS ILVDEYGMEE GCRQGLLDML ENSP00000265388/1-923 GSAALLQPLV TQMVNVYHVH QHSCFLYLGS ILVDEYGMEE GCRQGLLDML ENSBTAP00000006573/1-923 GSAALLQPLV TQMVNVYQVH QHSCFLYLGS ILVDEYGMEE GCRQGLLDML 1001 1050 ENSTTRP00000013862/1-968 QALCMPTFQL LEQQNGLQNH PDTVDDLFRL ATRFIQRSPV TLLRSQVVIP bmy_08081T0/1-930 QALCMPTFQL LEQQNGLQNH PDTVDDLFRL ATRFIQRSPV TLLRSQVVIP BACU006810/1-1084 QALCMPTFQL LEQQNGLQNH PDTVDDLFRL ATRFIQRSPV TLLRSQVVIP ENSP00000265388/1-923 QALCIPTFQL LEQQNGLQNH PDTVDDLFRL ATRFIQRSPV TLLRSQVVIP ENSBTAP00000006573/1-923 QALCIPTFQL LEQQNGLQNH PDTVDDLFRL ATRFIQRSPV TLLRSQVVIP 1051 1100 ENSTTRP00000013862/1-968 ILQWAIASTT LDHRDANCSV MRFLRDLIHT GVANDXXXXX XXXXXXXXXX bmy_08081T0/1-930 ILQWAIASTT LDHRDANCSV MRFLRDLIHT GVANDHEEDF ELRKELIGQV BACU006810/1-1084 ILQWAIASTT LDHRDANCSV MRFLRDLIHT GVANDHEEDF ELRKELIGQV ENSP00000265388/1-923 ILQWAIASTT LDHRDANCSV MRFLRDLIHT GVANDHEEDF ELRKELIGQV ENSBTAP00000006573/1-923 ILQWAIASTT LDHRDANCSV MRFLRDLIHT GVANDHEEDF EVRKELIGQV 1101 1150 ENSTTRP00000013862/1-968 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XTFCRWLENS bmy_08081T0/1-930 MNQLGQQLVS QLLHTCCFCL PPYTLPDVAE VLWEIMQVDR PTFCRWLENS BACU006810/1-1084 MNQLGQQLVS QLLHTCCFCL PPYTLPDVAE VLWEIMQVDR PTFCRWLENS ENSP00000265388/1-923 MNQLGQQLVS QLLHTCCFCL PPYTLPDVAE VLWEIMQVDR PTFCRWLENS ENSBTAP00000006573/1-923 MNQLGQQLVS QLLHTCCFCL PPYTLPDVAE VLWEIMQVDR PTFCRWLENS 1151 1200 ENSTTRP00000013862/1-968 LKGLPKETTV GAVTVTHKQL TDFHKQVTSA EECKQVCWAL RDFQVVSIAH bmy_08081T0/1-930 LKGLPKETTV GAVTVTHKQL TDFHKQVTR- ---------- ------YF-- BACU006810/1-1084 LKGLPKETTV GAVTVTHKQL TDFHKQVTR- ---------- ------YL-- ENSP00000265388/1-923 LKGLPKETTV GAVTVTHKQL TDFHKQVTSA EECKQVCWAL RDFTRLFR-- ENSBTAP00000006573/1-923 LKGLPKETTG GAVTVTHKQL TDFHKQVTSA EECKQVCWAL RDFTRLFR-- 1201 1250 ENSTTRP00000013862/1-968 TPALCLSPR bmy_08081T0/1-930 --------- BACU006810/1-1084 --------- ENSP00000265388/1-923 --------- ENSBTAP00000006573/1-923 ---------