KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:29:58 2014 Check: 00 .. Name: bmy_19413T0/1-1108 Len: 1108 Check: 9953 Weight: 1.00 Name: ENSTTRP00000000387/1-732 Len: 1108 Check: 2586 Weight: 1.00 Name: ENSP00000320434/1-734 Len: 1108 Check: 1355 Weight: 1.00 Name: ENSBTAP00000006577/1-731 Len: 1108 Check: 8194 Weight: 1.00 // 1 50 bmy_19413T0/1-1108 MAASPGPAGG AAAGAVQGSG PFDLAFDSGL EIKTRSVEQT LLPLVSQITT ENSTTRP00000000387/1-732 MAASPGPAGG AAAGAVHGSG PFGLAFDSGL EIKTRSVEQT LLPLVSQITT ENSP00000320434/1-734 MAASPGPAGV GGAGAVYGSG SSGFALDSGL EIKTRSVEQT LLPLVSQITT ENSBTAP00000006577/1-731 MAASPSPAGG GGAGAAHGSG PSSFAFDSGL EIKTRSVEQT LLPLVSQITT 51 100 bmy_19413T0/1-1108 FINHKDNTKK SDKTLQAIQR VGRAVNLAVG RFVKVGEAIA NENWDLKEEI ENSTTRP00000000387/1-732 LINHKDNTKK SDKTLQAIQR VGQAVNLAVG RFVKVGEAIA NENWDLKEEI ENSP00000320434/1-734 LINHKDNTKK SDKTLQAIQR VGQAVNLAVG RFVKVGEAIA NENWDLKEEI ENSBTAP00000006577/1-731 LINHKDNTKK SDKTLQAIQR VGQAVNLAVG RFVKVGEAIA NENWDLKEEI 101 150 bmy_19413T0/1-1108 NIACIEAKQA GETIAALTDM SSLNRPESDG QITIFTDKTG VIKAARLLLS ENSTTRP00000000387/1-732 NIACIEAKQA GETIAALTDM SSLNRPESDG QITIFTDKTG VIKAARLLLS ENSP00000320434/1-734 NIACIEAKQA GETIAALTDI TNLNHLESDG QITIFTDKTG VIKAARLLLS ENSBTAP00000006577/1-731 NIACIEAKQA GETIAALTDV SSLNRPESDG QITIFTDKTG VIKAARLLLS 151 200 bmy_19413T0/1-1108 SVTKVLLLAD RVVIKQIIRS RNKVLATMER LEKVNSSQEF VQIFSQFGNE ENSTTRP00000000387/1-732 SVTKVLLLAD RVVIKQIIRS RNKVLATMER LEKVNNFQEF VQIFSQFGNE ENSP00000320434/1-734 SVTKVLLLAD RVVIKQIITS RNKVLATMER LEKVNSFQEF VQIFSQFGNE ENSBTAP00000006577/1-731 SVTRVLLLAD RVVIKQIIRS RNKVLATMER LEKVNSFQEF VQIFSQFGNE 201 250 bmy_19413T0/1-1108 MVEFAHLTGE RQNDLKDEKK KVKMAAARAV LEKCTMMLLT ASKTCLRHPN ENSTTRP00000000387/1-732 MVEFAHLTGD RQNDLKDEKK KAKMAAARAV LEKCTMMLLT ASKTCLRHPN ENSP00000320434/1-734 MVEFAHLSGD RQNDLKDEKK KAKMAAARAV LEKCTMMLLT ASKTCLRHPN ENSBTAP00000006577/1-731 MVEFAHLTGD RQNDLKDEKK KAKMAAARSV LEKCTMMLLT ASKTCLRHPN 251 300 bmy_19413T0/1-1108 CESAHKNKEG VFDRMKVALD KVIEIVTECK PNGETDISSI SIFTGIKEFK ENSTTRP00000000387/1-732 CESAHKNKEG VFDRMKVALD KVIEIVTECK PNGETDISSI SIFTGIKEFK ENSP00000320434/1-734 CESAHKNKEG VFDRMKVALD KVIEIVTDCK PNGETDISSI SIFTGIKEFK ENSBTAP00000006577/1-731 CESAHKNKEG VFDRMKVALD KVIEIVTECK PNGESDISSI SVFTGIKEFK 301 350 bmy_19413T0/1-1108 MNIETLRENL YFQSKETLSA MLDVLLEHTE DFTDCAYTSH EHRERILELS ENSTTRP00000000387/1-732 MNIETLRENL YFQSKETLSA MLDALLERTE DFTDCAYTSH EHRERILELS ENSP00000320434/1-734 MNIEALRENL YFQSKENLSV TLEVILERME DFTDSAYTSH EHRERILELS ENSBTAP00000006577/1-731 MNIETLRENL CFQSKETLSA MLEALLERME DFTDCAYTSH EHRERILELS 351 400 bmy_19413T0/1-1108 AQARMELQQL ISLWIEAQSK KTKSIDEELE LAVLKISHSL NELKKELHST ENSTTRP00000000387/1-732 AQARMELQQL ISVWXXXQRK KTKSIDEELE LAILKISHSL NELKKELHST ENSP00000320434/1-734 TQARMELQQL ISVWIQAQSK KTKSIAEELE LSILKISHSL NELKKELHST ENSBTAP00000006577/1-731 AQARMELQQL VSVWIQAQSR KTKSIAEELE LTILKISHNL NELKKELHST 401 450 bmy_19413T0/1-1108 AAQLAADLVK YHADHVVLKA LKLTGVEGNL EGLAEYACKL SEQKERFVET ENSTTRP00000000387/1-732 AVQLAADLVK YHADHVVLKA LKLTGVEGNL EGLAEYACKL SEQKERLVET ENSP00000320434/1-734 ATQLAADLLK YHADHVVLKA LKLTGVEGNL EALAEYACKL SEQKEQLVET ENSBTAP00000006577/1-731 AAQLAADLLK YHADHVVLKA LKLTGVEGNL EGLAEYACKL SEQKERLVET 451 500 bmy_19413T0/1-1108 CRLLRHVSGT EPLEITCIHA EETFQVTGQQ IISAAETLTL HPSSKIAKEN ENSTTRP00000000387/1-732 CR-LRHVFGT EPLEITCIHA EETFQVTGQQ IISAAETLTL HPSSKIAKEN ENSP00000320434/1-734 CRLLRHISGT EPLEITCIHA EETFQVTGQQ IISAAETLTL HPSSKIAKEN ENSBTAP00000006577/1-731 CRLLRHVSGT EPLEITCLHA EETFQVTGQQ IISAAETLTL HPSSKIAKEN 501 550 bmy_19413T0/1-1108 LDVFCEAWES QISDMLTLLR EINDVFEGRR GETYGYLSLP KPMKNNANLK ENSTTRP00000000387/1-732 LDVFCEAWES QISDMLTLLR EINDVFEGRR GEKYGYLSLP KPMKNNANLK ENSP00000320434/1-734 LDVFCEAWES QISDMSTLLR EINDVFEGRR GEKYGYLSLP KPMKNNANLK ENSBTAP00000006577/1-731 LDVFCEAWES QISDMSTLLR EINDVFEGRR GEKYGYLSLP KPMKNSANLR 551 600 bmy_19413T0/1-1108 SLKPDKPDSE EQAKIAKLGL KLGLLTSDAN CEIEKWEDQE DEIVRYGRNM ENSTTRP00000000387/1-732 SLKPDKPDSE EQAKIAKLGL KLGLLTSDAN CEIEKWEDQE NEVVRYGRNM ENSP00000320434/1-734 SLKPDKPDSE EQAKIAKLGL KLGLLTSDAD CEIEKWEDQE NEIVQYGRNM ENSBTAP00000006577/1-731 SLKADKPDSE EQAKIAKLGL RLGLLTSDAN CEIEKWEDQE NEMVLYGRNM 601 650 bmy_19413T0/1-1108 SSMAYSLYLF TRGEGPIKTS QDLIHQLEVF VEEGLKLASS VQAFSKQLKD ENSTTRP00000000387/1-732 SSMAYSLYLF TXXXXXXXXX XXXXXXXXVF AEEGLKLASS VQVFSKQLKD ENSP00000320434/1-734 SSMAYSLYLF TRGEGPLKTS QDLIHQLEVF AAEGLKLTSS VQAFSKQLKD ENSBTAP00000006577/1-731 SSMAYSLYLF TRGEGPLKTY QDLIHQLEVF AEEGLKLASS VQAFSQQLKD 651 700 bmy_19413T0/1-1108 DDKLMLLLEI NKLVPLCHQL QAAAVSEALS SHGKATQKAW IALAQPPPLP ENSTTRP00000000387/1-732 DDKLMLLLEI NKLVLLCHQL QTV------- ---------- ---------- ENSP00000320434/1-734 DDKLMLLLEI NKLIPLCHQL QTV------- ---------- ---------- ENSBTAP00000006577/1-731 DDKLMLLLEI NKFVPLCHQL QTI------- ---------- ---------- 701 750 bmy_19413T0/1-1108 VKALSASPSS VHLEKYRPGL LGTVRIMGST NIPLVKALRS SVSDYVNYDI ENSTTRP00000000387/1-732 ---------- ---------- ---------T -TPLQNQVFL KVDKSIT--- ENSP00000320434/1-734 ---------- ---------- ---------T KTSLQNKVFL KVDKCIT--- ENSBTAP00000006577/1-731 ---------- ---------- ---------I KTPLQNQVFL KVDKCIT--- 751 800 bmy_19413T0/1-1108 IVRHYNYTGK LNIGADKENG IKLISVVFIL ICCFIILENI FVLLTIWKTK ENSTTRP00000000387/1-732 ---------- ------KTRG IMAILIQLLS FC-------- ---------- ENSP00000320434/1-734 ---------- ------KTRS MMALLVQLLS LC-------- ---------- ENSBTAP00000006577/1-731 ---------- ------KARS MMAVLVQLLS LC-------- ---------- 801 850 bmy_19413T0/1-1108 KFHRPMYYFI GNLALSDLLA GVAYTANLLL SGATTYKLTP AQWFLREGSM ENSTTRP00000000387/1-732 ---------- ---------- ---------- -----YKL-- ---------- ENSP00000320434/1-734 ---------- ---------- ---------- -----YKL-- ---------- ENSBTAP00000006577/1-731 ---------- ---------- ---------- -----YKL-- ---------- 851 900 bmy_19413T0/1-1108 FVALSASVFS LLAIAIERYI TMLKMKLHNG SNRFRSFLLI SACWVISLIL ENSTTRP00000000387/1-732 ---------- ---------- -LKKLQMENN R--------- ---WI----- ENSP00000320434/1-734 ---------- ---------- -LKKLQMENN G--------- ---WV----- ENSBTAP00000006577/1-731 ---------- ---------- -LKKVRMENN R--------- ---WV----- 901 950 bmy_19413T0/1-1108 GGLPIMGWNC ISALPGCSTV LPLYHKHYIL FCTTVFTLLL LSIVILYCRI ENSTTRP00000000387/1-732 ---------- ---------- ---------- ---------- ---------- ENSP00000320434/1-734 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006577/1-731 ---------- ---------- ---------- ---------- ---------- 951 1000 bmy_19413T0/1-1108 YSLVRTRSRR LTFRKNISKA SRSSEKSLAL LKTVIIVLGV FIACWAPLFI ENSTTRP00000000387/1-732 ---------- ---------- ---------- ---------- ---------- ENSP00000320434/1-734 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006577/1-731 ---------- ---------- ---------- ---------- ---------- 1001 1050 bmy_19413T0/1-1108 LLLLDVGCKV KTCDILFRTE YFLVLAVLNS GTNPIIYTLS NKEMRRAFVR ENSTTRP00000000387/1-732 ---------- ---------- ---------- ---------- ---------- ENSP00000320434/1-734 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006577/1-731 ---------- ---------- ---------- ---------- ---------- 1051 1100 bmy_19413T0/1-1108 IMSCCKCPRG DSTGKFTRPI IAGMEFSRSK SDNSSHPQKD DGDNPETIMS ENSTTRP00000000387/1-732 ---------- ---------- ---------- ---------- ------SVTN ENSP00000320434/1-734 ---------- ---------- ---------- ---------- ------SVTN ENSBTAP00000006577/1-731 ---------- ---------- ---------- ---------- ------SVT- 1101 1150 bmy_19413T0/1-1108 SGNVNSSS ENSTTRP00000000387/1-732 KDSVDGKT ENSP00000320434/1-734 KDTMDSKT ENSBTAP00000006577/1-731 --TVDGKT