KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:02 2014 Check: 00 .. Name: ENSTTRP00000014341/1-325 Len: 341 Check: 9781 Weight: 1.00 Name: ENSP00000224807/1-325 Len: 341 Check: 183 Weight: 1.00 Name: ENSBTAP00000006601/1-321 Len: 341 Check: 5156 Weight: 1.00 Name: bmy_17587T0/1-292 Len: 341 Check: 5111 Weight: 1.00 Name: BACU012390/1-313 Len: 341 Check: 8416 Weight: 1.00 // 1 50 ENSTTRP00000014341/1-325 ---------- ------GEIK MGELPLDINI QEPRWDQSTF LGRARHFFTV ENSP00000224807/1-325 ---------- ------MESK MGELPLDINI QEPRWDQSTF LGRARHFFTV ENSBTAP00000006601/1-321 ---------- ---------- MGELPLDINI QEPRWDQRTF LGRARHFFTV bmy_17587T0/1-292 MWSPWTPPWS PLTLVPALQK MGELPLDINI QEPRWDQSTF LGRARHFFTV BACU012390/1-313 ---------- ---------- MGELPLDINI QEPRWDQSTF LGRARHFFTV 51 100 ENSTTRP00000014341/1-325 TDPRNLLLSG AQLEASRNIV QNYRAGVVTP GLTEDQLWRA KYVYDSAFHP ENSP00000224807/1-325 TDPRNLLLSG AQLEASRNIV QNYRAGVVTP GITEDQLWRA KYVYDSAFHP ENSBTAP00000006601/1-321 TDPRNLLLSG AQLEASRNIV QNYRAGIVTP GLTEDQLWRA KYVYDSAFHP bmy_17587T0/1-292 TDPRNLLLSG AQLEASRNIV QNYRAGVVTP GLTEDQLWRA KYVYDSAFHP BACU012390/1-313 TDPRNLLLSG AQLEASRNIV QNYRAGVVTP GLTEDQLWRA KYVYDSAFHP 101 150 ENSTTRP00000014341/1-325 DTGEKVVLIG RMSAQVPMNM TITGCMLTFY RQTPTVVFWQ WVNQSFNAIV ENSP00000224807/1-325 DTGEKVVLIG RMSAQVPMNM TITGCMLTFY RKTPTVVFWQ WVNQSFNAIV ENSBTAP00000006601/1-321 DTGEKVVLIG RMSAQVPMNM TITGCMLIFY RKTPTVVFWQ WLNQSFNAVV bmy_17587T0/1-292 DTGEKVVLIG RM-------- ---------- -KTPTVVFWQ WVNQSFNAIV BACU012390/1-313 DTGEKVVLIG RMSAQVPMNM TITGCMLTFY RQ-------- WVNQSFNAIV 151 200 ENSTTRP00000014341/1-325 NYSNRSGDAP ITGGQLGTAY VSATTGAVAT ALGLKSLTKH LPPLVGRFVP ENSP00000224807/1-325 NYSNRSGDTP ITVRQLGTAY VSATTGAVAT ALGLKSLTKH LPPLVGRFVP ENSBTAP00000006601/1-321 NYSNRSGDAP ITVRQLGMAY VSATTGAVAT ALGLKSLTKH LPPLVGRFVP bmy_17587T0/1-292 NYSNRSGDAP ITVGQLGMAY VSATTGAVAT ALGLKSLTK- ---------- BACU012390/1-313 NYSNRSGDAP ITVGQLGTAY VSATTGAVAT ALGLKSLTKH LPPLVGRFVP 201 250 ENSTTRP00000014341/1-325 FAAVAAANCI NIPLMRQXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000224807/1-325 FAAVAAANCI NIPLMRQREL QVGIPVADEA GQRLGYSVTA AKQGIFQVVI ENSBTAP00000006601/1-321 FAAVAAANCI NIPLMRQREL QVGIPVTNEQ GQRLGHSVAA AKKGIFQVVI bmy_17587T0/1-292 ---------- ---------L QVGIPVTDEQ GQRLGHSVAA AKQGIFQVVV BACU012390/1-313 FAAVAAANCI NIPLMRQREL QVGIPVTDEQ GQRLGHSVAA AKQGIFQVVV 251 300 ENSTTRP00000014341/1-325 XXXXXXXXXX XXXXXXXXXX XXXXXXXRRP WLGAPLQVGL VGFCLVFATP ENSP00000224807/1-325 SRICMAIPAM AIPPLIMDTL EKKDFLKRRP WLGAPLQVGL VGFCLVFATP ENSBTAP00000006601/1-321 SRICMAIPAM AIPPVIMDTL EKKDFLKRRP WLGAPLQMGL VGFCLVFATP bmy_17587T0/1-292 SRICMAVPAM AIPPVIMDTL EKKDFLKRRP WLGAPLQVGL VGFCLVFATP BACU012390/1-313 SRICMAIPAM AIPPVIMDTL EKKDFLKHRP WLGAPLQVGL VGFCLVFATP 301 350 ENSTTRP00000014341/1-325 LCCALFPQRS SIHVSRLEPE LRAQIHEQNP SIEAVYYNKG L ENSP00000224807/1-325 LCCALFPQKS SIHISNLEPE LRAQIHEQNP SVEVVYYNKG L ENSBTAP00000006601/1-321 LCCALFPQRS SIHVSRLEPE LRAQIQEQNP SIEVVYYNKG L bmy_17587T0/1-292 LCCALFPQRS SIHVRRLEPE LRAQIHEQNP SIEVVYYNKG L BACU012390/1-313 LCCALFPQRS SIHVRRLEPE LRAQIHEQNP SIEVVYYNKG L