KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:03 2014 Check: 00 .. Name: ENSTTRP00000013288/1-317 Len: 435 Check: 1456 Weight: 1.00 Name: ENSP00000357633/1-335 Len: 435 Check: 4469 Weight: 1.00 Name: ENSBTAP00000006613/1-334 Len: 435 Check: 674 Weight: 1.00 Name: bmy_01358T0/1-287 Len: 435 Check: 7539 Weight: 1.00 Name: BACU004765/1-435 Len: 435 Check: 6613 Weight: 1.00 // 1 50 ENSTTRP00000013288/1-317 -------MAA GAVEVA-AAV V--------- ---------- ---------- ENSP00000357633/1-335 -------MAA GAAEAAVAAV E--------- ---------- ---------- ENSBTAP00000006613/1-334 -------MAA GAAEAA-AAV V--------- ---------- ---------- bmy_01358T0/1-287 ---------- ---------- ---------- ---------- ---------- BACU004765/1-435 MLVMGQSALC GAVRAEDGGL LFPGRAQPRS ALAWPTCLSP LGRRPKETHR 51 100 ENSTTRP00000013288/1-317 --EVGSAGQF EE-------- ---------- --LLRLRA-- ---------- ENSP00000357633/1-335 --EVGSAGQF EE-------- ---------- --LLRLKA-- ---------- ENSBTAP00000006613/1-334 --EVGSAGQF EE-------- ---------- --LLRLRA-- ---------- bmy_01358T0/1-287 ---------- ---------- ---------- ---------- ---------- BACU004765/1-435 DAEAGPGGTH GNPEIASRRR RAGTGSPQPA RGLPRAGAAR GLGGVSGHGR 101 150 ENSTTRP00000013288/1-317 ---------- ---------- ---------- KSLLVVHFWA PWAPQCGQMN ENSP00000357633/1-335 ---------- ---------- ---------- KSLLVVHFWA PWAPQCAQMN ENSBTAP00000006613/1-334 ---------- ---------- ---------- KSLLVVHFWA PWAPQCAQMN bmy_01358T0/1-287 ---------- ---------- ---------- ---------- --------MN BACU004765/1-435 WGRRSASRLP GSQPQSRCAR FITRPQECPL RSLLVVHFWA PWAPQCAQMN 151 200 ENSTTRP00000013288/1-317 DVMAELAREH PQVSFVKLEA EAVPEVSEKY EISSVPTFLF FKNSQ-MDRX ENSP00000357633/1-335 EVMAELAKEL PQVSFVKLEA EGVPEVSEKY EISSVPTFLF FKNSQKIDRL ENSBTAP00000006613/1-334 DVMAELAKEH QQVSFVKLEA EAVPEVSEKY EISSVPTFLF FKNSQKIDRL bmy_01358T0/1-287 DVMAELAREH PQVSFVKLEA EAVPEVSEKY EISSVPTFLF FKNSQKMDRL BACU004765/1-435 DVMAELAREH PQVSFVKLEA EAVPEVSEKY EISSVPTFLF FKNSQKMDRL 201 250 ENSTTRP00000013288/1-317 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000357633/1-335 DGAHAPELTK KVQRHASSGS FLPSANEHLK EDLNLRLKKL THAAPCMLFM ENSBTAP00000006613/1-334 DGAHAPELTK KVQRHASSGS FSPSGSEHPK EDLSLRLKKL THAAPCMLFM bmy_01358T0/1-287 DGAHAPELTK KVQRHASSGC FPPSGNEHPK EDLTLRLKKL THAAPCMLFM BACU004765/1-435 DGAHAPELTK KVQRHASSGS FPPSGNEHPK EDLTLRLKKL THAAPCMLFM 251 300 ENSTTRP00000013288/1-317 XXXXXXXXXX FSKQMVEILN KHNIQFSSFD VFSDEEVRQG LKTYSNWPTY ENSP00000357633/1-335 KGTPQEPRCG FSKQMVEILH KHNIQFSSFD IFSDEEVRQG LKAYSSWPTY ENSBTAP00000006613/1-334 KGTPQEPRCG FSKQMVEILN KHNIQFSSFD IFSDEEVRQG LKTYSSWPTY bmy_01358T0/1-287 KGTPQEPRCG FSKQMVEILN KHNIQFSSFD IFSDEEVRQG LKTYSNWPTY BACU004765/1-435 KGTPQEPRCG FSKQMVEILN KHNIQFSSFD IFSDEEVRQG LKTYSNWPTY 301 350 ENSTTRP00000013288/1-317 PQLYVSGELI GGLDIIKELE ASKELDTICP KAPKLEERLK VLTNKASVML ENSP00000357633/1-335 PQLYVSGELI GGLDIIKELE ASEELDTICP KAPKLEERLK VLTNKASVML ENSBTAP00000006613/1-334 PQLYVSGELI GGLDIIKELE ASKELDTICP KAPKLEERLK VLTNKASVML bmy_01358T0/1-287 PQLYVSGELI GGLDIIKELE ASKELDTICP KAPKLEERLK VLTNKASVML BACU004765/1-435 PQLYVSGELI GGLDIIKELE ASKELDTICP KAPKLEERLK VLTNKASVML 351 400 ENSTTRP00000013288/1-317 FMKGNKQEAK CGFSRQILEI LNSTGVEYET FDILEDEEVR QGLKTYSNWP ENSP00000357633/1-335 FMKGNKQEAK CGFSKQILEI LNSTGVEYET FDILEDEEVR QGLKAYSNWP ENSBTAP00000006613/1-334 FMKGNKQEAK CGFSRQILEI LNSTGIEYET FDILEDEEVR QGLKAYSNWP bmy_01358T0/1-287 FMKGNKQEAK CGFSRQILEI LNSTGVEYET FDILEDEEVR QGLKTYSNWP BACU004765/1-435 FMKGNKQEAK CGFSRQILEI LNSTGVEYET FDILEDEEVR QGLKTYSNWP 401 450 ENSTTRP00000013288/1-317 TYPQLYVKGE LVGGLDIVK- ---------- ----- ENSP00000357633/1-335 TYPQLYVKGE LVGGLDIVKE LKENGELLPI LRGEN ENSBTAP00000006613/1-334 TYPQLYVKGE LVGGLDIVKE LKENGELLPI LKGEN bmy_01358T0/1-287 TYPQLYVKGE LVGGLDIVKE LKENGELLPI LKGEN BACU004765/1-435 TYPQLYVKGE LVGGLDIVKE LKENGELLPI LKGEN