KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:03 2014 Check: 00 .. Name: ENSTTRP00000012911/1-359 Len: 466 Check: 7658 Weight: 1.00 Name: ENSP00000351669/1-462 Len: 466 Check: 5618 Weight: 1.00 Name: ENSBTAP00000006614/1-465 Len: 466 Check: 7022 Weight: 1.00 Name: bmy_12066T0/1-412 Len: 466 Check: 6021 Weight: 1.00 Name: BACU020100/1-360 Len: 466 Check: 683 Weight: 1.00 // 1 50 ENSTTRP00000012911/1-359 ---------- ---------- ---------- ---------- -LSLL----- ENSP00000351669/1-462 MAKFRRRTCI ILALFILFIF SLMMGLKMLR PNTATFGAPF GLDLLPELHQ ENSBTAP00000006614/1-465 MAKFRRRTCF ILSLFILFIF SLMMGLKMLR PNKAAFGDPF GLDLLPEIRQ bmy_12066T0/1-412 ---------- ---------- ---MGLKMLR PHKAAFGDPF GLDLLPEIRQ BACU020100/1-360 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012911/1-359 ---------- ---------- ---------- ---------- ---------- ENSP00000351669/1-462 RTIHLGKNFD FQKSDRINSE TNTKNLKSVE ITMKPSKASE LNLDELPPLN ENSBTAP00000006614/1-465 QT-HLTKVFD SQKSDKISSE TNIKNLKSEE ITVKASVASE PHPEEPPPLN bmy_12066T0/1-412 QTPHLVKTFD SQKSDKINSE TNVKNLKSVE ITVKPSKASE PYLEDLPPRN BACU020100/1-360 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000012911/1-359 -ILHVFYYSW YRNLQFG--- ---NHLVLEL WDPRIASNYP QGRPSPRDDS ENSP00000351669/1-462 NYLHVFYYSW YGNPQFDGKY IHWNHPVLEH WDPRIAKNYP QGRHNPPDDI ENSBTAP00000006614/1-465 YYLHVFYYSW YGNPQFDGKY IHWNHPVLSH WDPQITKKYP KGKHNPPDDI bmy_12066T0/1-412 YYLHIFYYSW YGNPQFDGKY VHWNHPILSH WDLRIAKNYP QGKHNPPDDI BACU020100/1-360 --LHIFYYSW YGNPQFDGKY VHWNHPILSH WDLRIAKKYP QGKHNPPDDI 151 200 ENSTTRP00000012911/1-359 GSSFYPXXXX XXXXXXXXXX XXXXXXXXXX XXVLALSWYP PDSNDENGEP ENSP00000351669/1-462 GSSFYPELGS YSSRDPSVIE THMRQMRSAS IGVLALSWYP PDVNDENGEP ENSBTAP00000006614/1-465 GSRFYPELGS YSSRDPSVIE THMKQMYSAS IGVLALSWYP PDLNDENGEP bmy_12066T0/1-412 GSSFYPELGS YSSRDPSVIE THMKQMYSAS IEI-NESW-- ---------- BACU020100/1-360 GSSFYPELGS YSSRDPSVIE THMKQMYSAS IGVLALSWYP PDSNDENGEP 201 250 ENSTTRP00000012911/1-359 TDNLVPTILD KAHKYNLKVT FHIEPYKNRD DKNMYQNIRY IIDKYGNHPA ENSP00000351669/1-462 TDNLVPTILD KAHKYNLKVT FHIEPYSNRD DQNMYKNVKY IIDKYGNHPA ENSBTAP00000006614/1-465 TDNLVPTILD KAHKYNLKVT FHIEPYKNRD DKTMYQNVKY IIDKYGNHPA bmy_12066T0/1-412 ---------- ----KQIEVT FHIEPYKNRD DKNMYRNVKY IIDKYGNHPA BACU020100/1-360 TDNLVPAILD KAHKYNLKVT FHIEPYKNRD DKNMYRNVKY IIDKYGNHPA 251 300 ENSTTRP00000012911/1-359 FYRYKTKNGS ALPLFYVYDS YITTAEKWAN LLTSSGSQSI RNSPYDALFI ENSP00000351669/1-462 FYRYKTKTGN ALPMFYVYDS YITKPEKWAN LLTTSGSRSI RNSPYDGLFI ENSBTAP00000006614/1-465 FYRYKTKNGN ALPMFYVYDS YITASQKWAN LLTSSGSQSI RNSPYDALFI bmy_12066T0/1-412 FYRYKTKNGS ALPMFYVYDS YITTAEKWAN LLTSSGSQSI RNSPYDALFI BACU020100/1-360 FYRYKTKNGS ALPMFYVYDS YITTAEKWAN LLTSSGSQSI RNSPYDALFI 301 350 ENSTTRP00000012911/1-359 ALLVEKKHRY EILRGGFDGI YTYFATNGFT YGSSYENWAK LKFFCDQFDL ENSP00000351669/1-462 ALLVEEKHKY DILQSGFDGI YTYFATNGFT YGSSHQNWAS LKLFCDKYNL ENSBTAP00000006614/1-465 ALLVDKKHRY RILRGGFDGI YTYFATNGFT YGSSYENWAK IKYFCDQFDL bmy_12066T0/1-412 ALLVEKKHRY EILRGGFDGI YTYFATNGFT YGSSYENWAK LKIFCDQFDL BACU020100/1-360 ALLVEKKHRY EILRGGFDGI YTYFATNGFT YGSSYENWAK LKFFCDQFDL 351 400 ENSTTRP00000012911/1-359 MFIPSVGPGY IDTSIRPWNT QNTRNRVNGK YYEDALSAAL QAHPSIISIT ENSP00000351669/1-462 IFIPSVGPGY IDTSIRPWNT QNTRNRINGK YYEIGLSAAL QTRPSLISIT ENSBTAP00000006614/1-465 MFIPSVGPGY IDTSIRPWNS HNTRNRINGK YYETALSAAL QAHPSIISIT bmy_12066T0/1-412 MFIPSVGPGY IDTSIRPWNT QNTRNRVNGK YYEEALSAAL QAHPNIISIT BACU020100/1-360 MFIPSVGPGY IDTSIRPWNT QNTRNRVNGK YYEEALSAAL QAHPSIISIT 401 450 ENSTTRP00000012911/1-359 SFNEWHEGTQ IEKAVPKRIS NTVYLDYRPH KPSLYLDLTR KWSEKYSKER ENSP00000351669/1-462 SFNEWHEGTQ IEKAVPKRTS NTVYLDYRPH KPGLYLELTR KWSEKYSKER ENSBTAP00000006614/1-465 SFNEWHEGTQ IESAVPKRTS NIVYLDYRPH KPSLYLELTR KWSEKYRKER bmy_12066T0/1-412 SFNEWHEGTQ IEKAIPKRTS NTVYLDYRPH KPSLYLDLTR KWSEKYSKER BACU020100/1-360 SFNEWHEGTQ IEKAIPKRTS NTVYLDYRPH KPSLYLDLTR KWSEKYSKER 451 500 ENSTTRP00000012911/1-359 ATYAFDHQ-- --LPVS ENSP00000351669/1-462 ATYALDRQ-- --LPVS ENSBTAP00000006614/1-465 AIYALGHQEL STQPVS bmy_12066T0/1-412 ATYALDHQ-- --LPVS BACU020100/1-360 ATYALDHQ-- --LPVS