KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:05 2014 Check: 00 .. Name: ENSP00000294339/1-331 Len: 334 Check: 2069 Weight: 1.00 Name: ENSBTAP00000006622/1-328 Len: 334 Check: 5010 Weight: 1.00 Name: ENSTTRP00000011049/1-330 Len: 334 Check: 7340 Weight: 1.00 Name: bmy_12718T0/1-213 Len: 334 Check: 1990 Weight: 1.00 Name: BACU000299/1-146 Len: 334 Check: 9831 Weight: 1.00 // 1 50 ENSP00000294339/1-331 MTERPPSEAA RSDPQLEGRD AAEASMAPPH LVLLNGVAKE TSRAAAAEPP ENSBTAP00000006622/1-328 MTEQPPSEAA HSDPPLEGRD AAEARMAPPH LVLLNGVAKE TSRATPAEPP ENSTTRP00000011049/1-330 MTERPPSEAA RSDPPLDGRD AAEARMAPPH LVLLNGVAKE TSRAVPAEPP bmy_12718T0/1-213 MTERPPSEAA RSDPALEGQD AAEARMAPPH LVLLNG---- ---------- BACU000299/1-146 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000294339/1-331 VIELGAR-GG PGGGPAGGGG AARDLKGRDA ATAEARHRVP TTELCRPPGP ENSBTAP00000006622/1-328 VIELGTRGGG PGGGPAGGGG AARDLKGREA AAAEARHRVP TTELCRPPGP ENSTTRP00000011049/1-330 VIELGARGGG PGGGPAGGGG AARDLKGRDA AAAEARHRVP TTELCRPPGP bmy_12718T0/1-213 ---------- ---------- ---------- ---------- ---------- BACU000299/1-146 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000294339/1-331 APAPAPASVT AELPGDGRMV QLSPPALAAP AAPGRALLYS LSQPLASLG- ENSBTAP00000006622/1-328 APASAP---- AELPGDGRMV QLSPPALAAP AAPGRALLYS LSQPLASLG- ENSTTRP00000011049/1-330 APASAP---- AELPGDGRMV QLSPPALAAP AAPGRALLYS LSQPLASLGS bmy_12718T0/1-213 ---------- ---------- ---------- ---------- ---------- BACU000299/1-146 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000294339/1-331 -SGFFGEPDA FPMFTTNNRV KRRPSPYEME ITDGPHTKVV RRIFTNSRER ENSBTAP00000006622/1-328 -SGFFGEPDA FPMFATNNRV KRRPSPYEME ITDGPHTKVV RRIFTNSRER ENSTTRP00000011049/1-330 HSGFFGEPDA FPMFATNNRV KRRPSPYEME ITDGPHTKVV RRIFTNSRER bmy_12718T0/1-213 -------PDA FPMFATNNRV KRRPSPYEME ITDGPHTKVV RRIFTNSRER BACU000299/1-146 ---------- ---------- ---------- --------VV RRIFTNSRER 201 250 ENSP00000294339/1-331 WRQQNVNGAF AELRKLIPTH PPDKKLSKNE ILRLAMKYIN FLAKLLNDQE ENSBTAP00000006622/1-328 WRQQNVNGAF AELRKLIPTH PPDKKLSKNE ILRLAMKYIN FLAKLLNDQE ENSTTRP00000011049/1-330 WRQQNVNGAF AELRKLIPTH PPDKKLSKNE ILRLAMKYIN FLAKLLNDQE bmy_12718T0/1-213 WRQQNVNGAF AELRKLIPTH PPDKKLSKNE ILRLAMKYIN FLAKLLNDQE BACU000299/1-146 WRQQNVNGAF AELRKLIPTH PPDKKLSKNE ILRLAMKYIN FLAKLLNDQE 251 300 ENSP00000294339/1-331 EEGTQRAKTG KDPVVGAGGG GGGGGGGAPP DDLLQDVLSP NSSCGSSLDG ENSBTAP00000006622/1-328 EEGTQRAKPG KDPVVGAGGG GGGGGGSAPP EDLLQDVLSP NSSCGSSLDG ENSTTRP00000011049/1-330 EEGSQRAKPG KDPAVGADGG GDDGGGAAPP DDLLQDVLSP NSSCGSSLDG bmy_12718T0/1-213 EEGSQRAKPG KDPAVGAGGG GGGGGGAAPP DDLLQDVLSP NSSCGSSLDG BACU000299/1-146 EEGSQRAKPG KDPAVGAGGG GGGGGDAAPP DDLLQDVLSP NSSCPSSLDG 301 350 ENSP00000294339/1-331 AASPDSYTEE PAPKHTARSL HPAMLPAADG AGPR ENSBTAP00000006622/1-328 AASPDSYTEE PAPKHTARSL HPAMLPAADG AGPR ENSTTRP00000011049/1-330 AASPDSYTEE PAPKHTARSL HRAMLPAADG AGPR bmy_12718T0/1-213 AASPDSYTEE PAPKHTARSL HPAMLPAADG AGPR BACU000299/1-146 AASPDSYTEE PAPKHTARSL HPAMLPAADG AGPR