KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:06 2014 Check: 00 .. Name: ENSTTRP00000009741/1-161 Len: 228 Check: 676 Weight: 1.00 Name: bmy_01062T0/1-120 Len: 228 Check: 2403 Weight: 1.00 Name: BACU014535/1-198 Len: 228 Check: 7749 Weight: 1.00 Name: ENSP00000288861/1-185 Len: 228 Check: 2640 Weight: 1.00 Name: ENSBTAP00000006645/1-185 Len: 228 Check: 3682 Weight: 1.00 // 1 50 ENSTTRP00000009741/1-161 VPGTAPKVS- ---------- ---------- -APAWFPSIS FPG--LSEAC bmy_01062T0/1-120 -MNLTLI--- ---------- ---------- ----SLLPLS PPP------- BACU014535/1-198 MATDHLVYS- ---------- ---------- CVHGSFLKLC PPGKYYKEAT ENSP00000288861/1-185 -MGQCLRYQM HWEDLEEYQA LTFLTRNEIL CIHDTFLKLC PPGKYYKEAT ENSBTAP00000006645/1-185 -MGQCLRYQM HWEDLEEYQA LTFLTRNEIL CIHDSFLKLC PPGKYYKEAT 51 100 ENSTTRP00000009741/1-161 LYIGYLELAI NSLVNPFRDR ICRVFSHDDA FSFEDVRGTA SVFSEQACPS bmy_01062T0/1-120 ---------P HPQVNPFRDR ICRVFSHNNV FSFEDVLGMA SVFSEQACPS BACU014535/1-198 LTMDQVSSLP ALRVNPFRDR ICRVFSHNNV FSFEDVLGMA SVFSKKACPS ENSP00000288861/1-185 LTMDQVSSLP ALRVNPFRDR ICRVFSHKGM FSFEDVLGMA SVFSEQACPS ENSBTAP00000006645/1-185 LTVDQVSSLP ALRVNPFRDR ICRVFSHNNV FSFEDVLGMA SVFSEQACPS 101 150 ENSTTRP00000009741/1-161 LKIEYAFRIY D--------- ---------- ---------- ---------- bmy_01062T0/1-120 LKIEYAFRIY D--------- ---------- ---------- ---------- BACU014535/1-198 LKIEYAFRIY GLPPQSTCCA ISSLFCLLSV LFWMEQLFWV ENAGPGYVLS ENSP00000288861/1-185 LKIEYAFRIY D--------- ---------- ---------- ---------- ENSBTAP00000006645/1-185 LKIEYAFRIY D--------- ---------- ---------- ---------- 151 200 ENSTTRP00000009741/1-161 ---FNENGFI DEEDL-RIIL QLLDRDDASE DLLTDLSSHV LNESDVDNDN bmy_01062T0/1-120 ---FNENGFI DEEDLQRIIL RLLNSDDVSE DLLTDLTSHV ---CALGCGT BACU014535/1-198 SGYFNENGFI DEEDLQRIIL RLLNSDDVSE DLLTDLTSHV LNESDLDNDN ENSP00000288861/1-185 ---FNENGFI DEEDLQRIIL RLLNSDDMSE DLLMDLTNHV LSESDLDNDN ENSBTAP00000006645/1-185 ---FNENGFI DEEDLQRIIL RLLNSDDMSE DLLTDLTSHV LNESDLDNDN 201 250 ENSTTRP00000009741/1-161 MLSFSESEHA MARSPDFMNS FRIHFWGC bmy_01062T0/1-120 VAGVG----- ----PAIT-- -------- BACU014535/1-198 VLSFSEFEHA MAKSPDFMK- -------- ENSP00000288861/1-185 MLSFSEFEHA MAKSPDFMNS FRIHFWGC ENSBTAP00000006645/1-185 MLSFSEFEHA MAKSPDFMNS FRIHFWGC