KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:06 2014 Check: 00 .. Name: ENSP00000366244/1-606 Len: 654 Check: 5555 Weight: 1.00 Name: ENSBTAP00000006646/1-611 Len: 654 Check: 2988 Weight: 1.00 Name: BACU008460/1-611 Len: 654 Check: 709 Weight: 1.00 Name: bmy_15678T0/1-646 Len: 654 Check: 9817 Weight: 1.00 Name: ENSTTRP00000009458/1-609 Len: 654 Check: 7061 Weight: 1.00 // 1 50 ENSP00000366244/1-606 ---------- ---------- ---------- ---------- MEPPRGPPAN ENSBTAP00000006646/1-611 ---------- ---------- ---------- ---------- MEPPRGPPAN BACU008460/1-611 ---------- ---------- ---------- ---------- MEPPRGPPAN bmy_15678T0/1-646 MARLGLKPTE RRSPPDCACA RAPWHLPSPT LARLDKVLGS MEPPRGPPAN ENSTTRP00000009458/1-609 ---------- ---------- ---------- ---------- MEPPRGPPAN 51 100 ENSP00000366244/1-606 GAEPSRAVGT VKVYLPNKQR TVVTVRDGMS VYDSLDKALK VRGLNQDCCV ENSBTAP00000006646/1-611 GAEPSRSVGT VKVYLPNKQR TVVTVRDGMS VYDSLDKALK VRGLNQDCCV BACU008460/1-611 GAEPSRAVGT VKVYLPNKQR TVVTVRDGMS VYDSLDKALK VRGLNQDCCV bmy_15678T0/1-646 GAEPSRAVGT VKVYLPNKQR TVVTVRDGMS VYDSLDKALK VRGLNQDCCV ENSTTRP00000009458/1-609 GAEPSRAVGT VKVYLPNKQR TVVTVRDGMS VYDSLDKALK VRGLNQDCCV 101 150 ENSP00000366244/1-606 VYRLIKGRKT VTAWDTAIAP LDGEELIVEV LEDVPLTMHN FVRKTFFSLA ENSBTAP00000006646/1-611 VYRLIKGRKT VTAWDTAIAP LDGEELIVEV LEDVPLTMHN FVRKTFFSLA BACU008460/1-611 VYRLIKGRKT VTAWDTAIAP LDGEELIVEV LEDVPLTMHN FVRKTFFSLA bmy_15678T0/1-646 VYRLIKGRKT VTAWDTAIAP LDGEELIVEV LEDVPLTMHN FVRKTFFSLA ENSTTRP00000009458/1-609 VYRLIKGRKT VTAWDTAIAP LDGEELIVEV LEDVPLTMHN FVRKTFFSLA 151 200 ENSP00000366244/1-606 FCDFCLKFLF HGFRCQTCGY KFHQHCSSKV PTVCVDMSTN RQQ---FYHS ENSBTAP00000006646/1-611 FCDFCLKFLF HGFRCQTCGY KFHQHCSSKV PTVCVDMSTN RRQ---FYHS BACU008460/1-611 FCDFCLKFLF HGFRCQTCGY KFHQHCSSKV PTVCVDMSTN RRQ---FYHS bmy_15678T0/1-646 FCDFCLKFLF HGFRCQTCGY KFHQHCSSKV PTVCVDMSTN RRQ---FYHS ENSTTRP00000009458/1-609 FCDFCLKFLF HGFRCQTCGY KFHQHCSSKV PTVCVDMSTN RRQPSRFYHS 201 250 ENSP00000366244/1-606 VQDLSGGSRQ HEAPSNRPLN ELLTPQGP-- ---SPRTQHC DPEHFPFPAP ENSBTAP00000006646/1-611 VQDLSGSSRQ HEVPSNRPLN EPLTPQSPSL SPASSCTQHR DPEHFSFPAQ BACU008460/1-611 VQDLSGGSRQ HEAPSNRPLN EPLTPQGPSL SPASSCTQHR DPKHFPFPAP bmy_15678T0/1-646 VQDLSGGSRQ HEAPSNRPLN EPLTPQGP-- ---SSCTQHR DPKHFPFPAP ENSTTRP00000009458/1-609 VQDLSGGSRQ HEAPSNRPLN EPLTPQGP-- ---SSCTQHR DPKHFPFPAP 251 300 ENSP00000366244/1-606 ANAPLQRIRS TSTPNVHMVS TTAPMDSNLI QLTGQSFSTD AAGSRGGSDG ENSBTAP00000006646/1-611 ANTPLQRIRS TSTPNVHMVS TTAPMDSGLI QLTGQNFNTD AAGNRGGGDG BACU008460/1-611 ANAPLQRIRS TSTPNVHMVS TTAPMDSGLI QLPAQSFNTD AAGNRGGGDG bmy_15678T0/1-646 ANAPLQRIRS TSTPNVHMVS TTAPMDSGLI QLPAQSFNTD AAGNRGGGDG ENSTTRP00000009458/1-609 ANAPLQRIRS TSTPNVHMVS TTAPMDSGLI QLPAQSFNTD AAGNRGGGDG 301 350 ENSP00000366244/1-606 TPRGSPSPAS VSSGRKSPHS KSPAEQRERK SLADDKKKVK NLGYRDSGYY ENSBTAP00000006646/1-611 APRGSPSPAS VSSGRKSPHS KSPSEQRERK SLADDKKKVK NLGYRDSGYY BACU008460/1-611 TPRGSPSPAS VSSGRKSPHS KSPSEQRERK SLADDKKKVK NLGYRDSGYY bmy_15678T0/1-646 TPRGSPSPAS VSSGRKSPHS KSPSEQRERK SLADDKKKVK NLGYRDSGYY ENSTTRP00000009458/1-609 TPRGSPSPAS MSSGRKSPHS KSPSEQRERK SLADDKKKVK NLGYRDSGYY 351 400 ENSP00000366244/1-606 WEVPPSEVQL LKRIGTGSFG TVFRGRWHGD VAVKVLKVSQ PTAEQAQAFK ENSBTAP00000006646/1-611 WEVPPSEVQL LKRIGTGSFG TVFRGRWHGD VAVKVLKVAQ PTAEQAQAFK BACU008460/1-611 WEVPPSEVQL LKRIGTGSFG TVFRGRWHGD VAVKVLKVAQ PTAEQAQAFK bmy_15678T0/1-646 WEVPPSEVQL LKRIGTGSFG TVFRGRWHGD VAVKVLKVAQ PTAEQAQAFK ENSTTRP00000009458/1-609 WEVPPSEVQL LKRIGTGSFG TVFRGRWHGD VAVKVLKVAQ PTAEQAQAFK 401 450 ENSP00000366244/1-606 NEMQVLRKTR HVNILLFMGF MTRPGFAIIT QWCEGSSLYH HLHVADTRFD ENSBTAP00000006646/1-611 NEMQVLRKTR HVNILLFMGF MTRPGFAIIT QWCEGSSLYH HLHVADTRFD BACU008460/1-611 NEMQVLRKTR HVNILLFMGF MTRPGFAIIT QWCEGSSLYH HLHVADTRFD bmy_15678T0/1-646 NEMQVLRKTR HVNILLFMGF MTRPGFAIIT QWCEGSSLYH HLHVADTRFD ENSTTRP00000009458/1-609 NEMQVLRKTR HVNILLFMGF MTRPGFAIIT QWCEGSSLYH HLHVADTRFD 451 500 ENSP00000366244/1-606 MVQLIDVARQ TAQGMDYLHA KNIIHRDLKS NNIFLHEGLT VKIGDFGLAT ENSBTAP00000006646/1-611 MVQLIDVARQ TAQGMDYLHA KNIIHRDLKS NNIFLHEGLT VKIGDFGLAT BACU008460/1-611 MVQLIDVARQ TAQGMDYLHA KNIIHRDLKS NSIFLHEGLT VKIGDFGLAT bmy_15678T0/1-646 MVQLIDVARQ TAQGMDYLHA KNIIHRDLKS NNIFLHEGLT VKIGDFGLAT ENSTTRP00000009458/1-609 MVQLIDVARQ TAQGMDYLHA KNIIHRDLKS NNIFLHEGLT VKIGDFGLAT 501 550 ENSP00000366244/1-606 VKTRWSGAQP LEQPSGSVLW MAAEVIRMQD PNPYSFQSDV YAYGVVLYEL ENSBTAP00000006646/1-611 VKTRWSGAQP LEQPSGSVLW MAAEVIRMQD PNPYSFQSDV YAYGVVLYEL BACU008460/1-611 VKTRWSGAQP LEQPSGSVLW MAAEVIRMQD PNPYSFQSDV YAYGVVLYEL bmy_15678T0/1-646 VKTRWSGAQP LEQPSGSVLW MAAEVIRMQD PNPYSFQSDV YAYGVVLYEL ENSTTRP00000009458/1-609 VKTRWSGAQP LEQPSGSVLW MAAEVIRMQD PNPYSFQSDV YAYGVVLYEL 551 600 ENSP00000366244/1-606 MTGSLPYSHI GCRDQIIFMV GRGYLSPDLS KISSNCPKAM RRLLSDCLKF ENSBTAP00000006646/1-611 MTGSLPYSHI GSRDQIIFMV GRGYLSPDLS KISSNCPKAM RRLLSDCLKF BACU008460/1-611 MTGSLPYSHI GSRDQIIFMV GRGYLSPDLS KISSNCPKAM RRLLSDCLKF bmy_15678T0/1-646 MTGSLPYSHI GSRDQIIFMV GRGYLSPDLS KISSNCPKAM RRLLSDCLKF ENSTTRP00000009458/1-609 MTGSLPYSHI GSRDQIIFMV GRGYLSPDLS KISSNCPKAM RRLLSDCLKF 601 650 ENSP00000366244/1-606 QREERPLFPQ ILATIELLQR SLPKIERSAS EPSLHRTQAD ELPACLLSAA ENSBTAP00000006646/1-611 QREERPLFPQ ILATIELLQR SLPKIERSAS EPSLHRTQAD ELPACLLSAA BACU008460/1-611 QREERPLFPQ ILATIELLQR SLPKIERSAS EPSLHRTQAD ELPACLLSAA bmy_15678T0/1-646 QREERPLFPQ ILATIELLQR SLPKIERSAS EPSLHRTQAD ELPACLLSAA ENSTTRP00000009458/1-609 QREERPLFPQ ILATIELLQR SLPKIERSAS EPSLHRTQAD ELPACLLSAA 651 700 ENSP00000366244/1-606 RLVP ENSBTAP00000006646/1-611 RLVP BACU008460/1-611 RLVP bmy_15678T0/1-646 RLVP ENSTTRP00000009458/1-609 RLVP