KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:07 2014 Check: 00 .. Name: ENSTTRP00000009476/1-196 Len: 294 Check: 9370 Weight: 1.00 Name: ENSP00000218388/1-207 Len: 294 Check: 2548 Weight: 1.00 Name: ENSBTAP00000006653/1-207 Len: 294 Check: 52 Weight: 1.00 Name: bmy_15680T0/1-294 Len: 294 Check: 2228 Weight: 1.00 Name: BACU008462/1-257 Len: 294 Check: 3666 Weight: 1.00 // 1 50 ENSTTRP00000009476/1-196 ---------- ---------- ---------- ---------- ---------- ENSP00000218388/1-207 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006653/1-207 ---------- ---------- ---------- ---------- ---------- bmy_15680T0/1-294 MGEGGGQGEA QGEGEEEGAS PFRQPRARPL ASADGGRMSN ASRKPGGLWF BACU008462/1-257 ---------- ---------- ---------- -------MSN ASRKPGGLWF 51 100 ENSTTRP00000009476/1-196 ---------- ---------- ---------- -------MAP FAPLASGILL ENSP00000218388/1-207 ---------- ---------- ---------- -------MAP FEPLASGILL ENSBTAP00000006653/1-207 ---------- ---------- ---------- -------MAP FAPMASGILL bmy_15680T0/1-294 PTSCHPAPRL DIYPPLLQPC RHRRRPSAQR GYTRERTMAP FAPLASGILL BACU008462/1-257 PTSCHPAPRL DIYPPLLQPC RHRRRPSAQR GYTRERTMAP FAPLASGILL 101 150 ENSTTRP00000009476/1-196 LLWLTAPSRA CTCVPPHPQM AFCNSDLVIR AKFVXXXXXX XXXXXXXXXX ENSP00000218388/1-207 LLWLIAPSRA CTCVPPHPQT AFCNSDLVIR AKFVGTPEVN QTTLYQRYEI ENSBTAP00000006653/1-207 LLWLTAPSRA CTCVPPHPQT AFCNSDVVIR AKFVGTAEVN ETALYQRYEI bmy_15680T0/1-294 LLWLTAPSRA CTCVPPHPQT AFCSSDLVIR AKFVGTAEVN RTSLYQRYEI BACU008462/1-257 LLWLTAPSRA CTCVPPHPQT AFCSSDLVIR AKFVGTAEVN RTSLYQRYEI 151 200 ENSTTRP00000009476/1-196 XXXXMFKGFN ALGDASDIRF IYTAATESVC GYSHRSQNRS EEFLIAGQLL ENSP00000218388/1-207 KMTKMYKGFQ ALGDAADIRF VYTPAMESVC GYFHRSHNRS EEFLIAGKLQ ENSBTAP00000006653/1-207 KMTKMFKGFS ALRDAPDIRF IYTPAMESVC GYFHRSQNRS EEFLIAGQLS bmy_15680T0/1-294 KMTKMFKGFN ALGDASDIRF IYTAAMESVC GYFHRSQNRS EEFLIAGQLS BACU008462/1-257 KMTKMFKGFN ALGDASDIRF IYTAAMESVC GYFHRSQNRS EEFLIAGQLS 201 250 ENSTTRP00000009476/1-196 NGNLYITTCS FVAPWNSLSS AQRRGFTKTY AAGCKECTVF PCSSIPCKLQ ENSP00000218388/1-207 DGLLHITTCS FVAPWNSLSL AQRRGFTKTY TVGCEECTVF PCLSIPCKLQ ENSBTAP00000006653/1-207 NGHLHITTCS FVAPWNSMSS AQRRGFTKTY AAGCEECTVF PCSSIPCKLQ bmy_15680T0/1-294 NGNLYITTCS FVAPWNSLSS AQRRGFTKTY AAGCEECTVF PCSSIPCKLQ BACU008462/1-257 NGNLYITTCS FVAPWNSLSS AQRRGFTKTY AAGCEECTVF PCSSIPCKLQ 251 300 ENSTTRP00000009476/1-196 SDTHCLWTDQ LLTGSDKGFQ SRHLACLPRE PGL------- ---- ENSP00000218388/1-207 SGTHCLWTDQ LLQGSEKGFQ SRHLACLPRE PGLCTWQSLR SQIA ENSBTAP00000006653/1-207 SDTHCLWTDQ LLTGSDKGFQ SRHLACLPRE PGLCTWQSLR AQMA bmy_15680T0/1-294 SDTHCLWTDQ LLTGSDKGFQ SRHLACLPRE PGMCTWQSLR PRMA BACU008462/1-257 SDTHCLWTDQ LLTGSDKGFQ SRHLACLPRE PGMCSWQSLR PRMA