KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:07 2014 Check: 00 .. Name: ENSP00000350005/1-153 Len: 210 Check: 2678 Weight: 1.00 Name: ENSBTAP00000006656/1-146 Len: 210 Check: 2691 Weight: 1.00 Name: ENSTTRP00000005691/1-152 Len: 210 Check: 109 Weight: 1.00 Name: bmy_09794T0/1-126 Len: 210 Check: 6017 Weight: 1.00 Name: BACU006405/1-203 Len: 210 Check: 7979 Weight: 1.00 // 1 50 ENSP00000350005/1-153 ---------- ---------- -MVATKTFAL LLLSLFLAVG LGEKKEGHFS ENSBTAP00000006656/1-146 ---------- ---------- -MLAMKTFSL LVVSLLLAVV LGEKEEDHSK ENSTTRP00000005691/1-152 ---------- ---------- -MLAMKTLSL LLVSLLLALV LGEKEEGHSS bmy_09794T0/1-126 MGVDVDVDRT LERSSGNNHW KMVAMKTFSL LLVSLLLALV LGEKEEGHSR BACU006405/1-203 MGVDVHVDRT LERSSGNNHW KMVAMKTFSL LLVSLLLALV LGEKEEGHSR 51 100 ENSP00000350005/1-153 ALPSLPVGSH AKVSSPQPRG PRYAEGTFIS DYSIAMDKIH QQDFVNWLLA ENSBTAP00000006656/1-146 ------LGFH SKASGSQPRA TRYAEGTFIS DYSIAMDKIR QQDFVNWLLA ENSTTRP00000005691/1-152 SLPSLPLRFH TKASGSQPRA PRYAEGTFIS DYSIAMDKIR QQDFVNWLLA bmy_09794T0/1-126 ------LGFH TKASGSQPRG PRYAEGTFIS DYSIAMDKIR QQDFVNWLLA BACU006405/1-203 ------LGFH TKASGSQPRG PRYAEGTFIS DYSIAMDKIR QQDFVNWLLA 101 150 ENSP00000350005/1-153 QKGKKNDWKH NITQREARAL ELASQANRKE EEAVEPQSSP AKNPSDEDLL ENSBTAP00000006656/1-146 QKGKKSDWIH NITQREAGAL ELAHQSNRK- EEAKEKQGSL PKNPSDEDLL ENSTTRP00000005691/1-152 QKGKKSDWKH NITQREARAL ELAHQSNRK- EEAREQQGSL PKNPSDDGLL bmy_09794T0/1-126 QKGKKSDWKH NITQREAR-- --AHQSNRK- EEAREQQ--- ---------- BACU006405/1-203 QKGKKSDWKH NITQREARAL ELAHQSNRK- EEAREQQGSL PKNPSDDDLL 151 200 ENSP00000350005/1-153 RDLLIQELLA CLLDQTNLCR LRSR------ ---------- ---------- ENSBTAP00000006656/1-146 KHLLIRELLA WMVDQMELCR LRFQ------ ---------- ---------- ENSTTRP00000005691/1-152 KDLLIQELLS WIVDQMELCR LRFQ------ ---------- ---------- bmy_09794T0/1-126 ---------- ---------- ---------- ---------- ---------- BACU006405/1-203 KDLLIRELLS WIVDQMELCR LSFTISSSYF VRNLSHSLYP YCHHLSSGPH 201 250 ENSP00000350005/1-153 ---------- ENSBTAP00000006656/1-146 ---------- ENSTTRP00000005691/1-152 ---------- bmy_09794T0/1-126 ---------- BACU006405/1-203 HFYFGLLQLT