KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:08 2014 Check: 00 .. Name: ENSP00000259089/1-505 Len: 536 Check: 1606 Weight: 1.00 Name: bmy_17301T0/1-390 Len: 536 Check: 3892 Weight: 1.00 Name: ENSBTAP00000006659/1-501 Len: 536 Check: 5770 Weight: 1.00 Name: ENSTTRP00000011323/1-501 Len: 536 Check: 2925 Weight: 1.00 Name: BACU015247/1-501 Len: 536 Check: 1969 Weight: 1.00 // 1 50 ENSP00000259089/1-505 ---------- ---------- MGLVSSKKPD KEKPIKEKDK GQWSPLKVSA bmy_17301T0/1-390 MRESLLPVAL PGATGPHCPR MGVVSSK--- --RQVKEKGK GRWSPVKAST ENSBTAP00000006659/1-501 ---------- ---------- MGVVSSK--- --RQVKEKGR SGWSPVKTST ENSTTRP00000011323/1-501 ---------- ---------- MGVVSSK--- --RQVKEKGK GRWSPEKAST BACU015247/1-501 ---------- ---------- MGVVSSK--- --RQVKEQGK GKWSPVKAGT 51 100 ENSP00000259089/1-505 QDKDAPPLPP L--------- -VVFNHLTPP PPDE-HLDED KHFVVALYDY bmy_17301T0/1-390 QGKEAPPLPP LVSDCCAQLE GVVFNHLAPP APGTTHPDQE EHFVVALYDY ENSBTAP00000006659/1-501 QSKEPPPLPS L--------- -VVFNHLTPP PPDTTHPDQE NHFVVALYDY ENSTTRP00000011323/1-501 QGKEAPPLPP L--------- -VVFNHVAPP PPDTRHPDQE EHFVVALYDY BACU015247/1-501 QGKEAPPLPP L--------- -VVFNHLAAP APRTTHPDQE EHFVVALYDY 101 150 ENSP00000259089/1-505 TAMNDRDLQM LKGEKLQVLK GTGDWWLARS LVTGREGYVP SNFVARVESL bmy_17301T0/1-390 KAVNDRDLQM MKGEKLQILK EAGDWWLAKS LITGREGYVP SNFVTRIETL ENSBTAP00000006659/1-501 KAMNDRDLQM LKGEKLQILK ETGDWWLAKS LITGREGYVP SNFVARVETL ENSTTRP00000011323/1-501 KAVNDRDLQM LKGEKLQILK EAGDWWLAKS LITGREGYVP SNFVTRIETL BACU015247/1-501 KAMNDRDLQM LKGEKLQILK EAGDWWLAKS LITGREGYVP SNFVTRIETL 151 200 ENSP00000259089/1-505 EMERWFFRSQ GRKEAERQLL APINKAGSFL IRESETNKGA FSLSVKDVTT bmy_17301T0/1-390 EVEKWFFRSI CRRDAERQLL APINKVGSFL IRESETSKGA FSLSVKDVTT ENSBTAP00000006659/1-501 EVEKWFFRSI CRRDAERQLL APVNKAGAFL IRESETSKGA FSLSVKDVTT ENSTTRP00000011323/1-501 EVEKWFFRSI CRRDAERQLL APINKAGSFL IRESETSKGA FSLSVKDVTT BACU015247/1-501 EVEKWFFRSI CRRDAERQLL APINKAGSFL IRESETSKGA FSLSVKDVTT 201 250 ENSP00000259089/1-505 QGELIKHYKI RCLDEGGYYI SPRITFPSLQ ALVQHYSKKG DGLCQRLTLP bmy_17301T0/1-390 QGEVIKHYKI RSLDEGGYYI SPRNTFPTLQ ALVQHYSKKG DGLCQRLTQP ENSBTAP00000006659/1-501 QGEVIKHYKI RSLDEGGYYI SPRSAFPTLQ ALVQHYSKKG DGLCQRLTHP ENSTTRP00000011323/1-501 QGEVIKHYKI RSLDEGGYYI SPRNTFPTLQ ALVQHYSKKG DGLCQRLTQP BACU015247/1-501 QGEVIKHYKI RSLDEGGYYI SPRSTFPTLQ ALVQHYSKKG DGLCQRLTQP 251 300 ENSP00000259089/1-505 CVRPAPQNPW AQDEWEIPRQ SLRLVRKLGS GQFGEVWMGY YKNNMKVAIK bmy_17301T0/1-390 CVSLALQNPW AQDEWEIPRQ SLKLLRKLGS GQFGEVWMGY YKNNIKVAIK ENSBTAP00000006659/1-501 CVSLAPQNPW GQDEWEIPRQ SLKLVRKLGS GQFGEVWMGY YKNNIKVAIK ENSTTRP00000011323/1-501 CVSLALQNPW AQDEWEIPRQ SLKLVRKLGS GQFGEVWMGY YKNNIKVAIK BACU015247/1-501 CVSLALQNPW AQDEWEIPRQ SLKLLRKLGS GQFGEVWMGY YKNNIKVAIK 301 350 ENSP00000259089/1-505 TLKEGTMSPE AFLGEANVMK ALQHERLVRL YAVVTKEPIY IVTEYMARGC bmy_17301T0/1-390 TLKEGTMSPE AFLGEANLMK TLRHERLVRL YAVVTKEPIY IVTEYMARGC ENSBTAP00000006659/1-501 TLKEGTMSPE AFLGEANLMK TLQHERLVRL YAVVTKEPIY IVTEYMARGC ENSTTRP00000011323/1-501 TLKEGTMSPE AFLGEANLMK TLQHERLVRL YAVVTKEPIY IVTEYMARGC BACU015247/1-501 TLKEGTMSPE AFLGEANLMK TLRHERLVRL YAVVTKEPIY IVTEYMARGC 351 400 ENSP00000259089/1-505 LLDFLKTDEG SRLSLPRLID MSAQIAEGMA YIERMNSIHR DLRAANILVS bmy_17301T0/1-390 LLDFLKTDEG NRLSLPRLID MSAQVCENRG ---------- ---------- ENSBTAP00000006659/1-501 LLDFLKTDEG SRLSLSRLID MSAQIAEGMA YIEQMNSIHR DLRAANILVS ENSTTRP00000011323/1-501 LLDFLKTDEG SRLSLPRLID MSAQIAEGMA YIEQMNSIHR DLRAANILVS BACU015247/1-501 LLDFLKTDEG NRLSLPRLID MSAQIAEGMA YIEQMNSIHR DLRAANILVS 401 450 ENSP00000259089/1-505 EALCCKIADF GLARIIDSEY TAQEGAKFPI KWTAPEAIHF GVFTIKADVW bmy_17301T0/1-390 ---------- GLPTV----- ---------- ----PLSVLF SI-------- ENSBTAP00000006659/1-501 EALCCKIGDF GLARIIDNEY TAQEGAKFPI KWTAPEAIHF GVFTIKADVW ENSTTRP00000011323/1-501 ETLCCKIGDF GLARIIDNEY TAQEGAKFPI KWTAPEAIHF GVFTIKADVW BACU015247/1-501 ETLCCKIGDF GLARIIDNEY TAQEGAKFPI KWTAPEAIHF GVFTIKADVW 451 500 ENSP00000259089/1-505 SFGVLLMEVV TYGRVPYPGM SNPEVIRNLE RGYRMPRPDT CPPELYRGVI bmy_17301T0/1-390 ---------- ---------- ---------- -G-------- C--------- ENSBTAP00000006659/1-501 SFGILLMEIV TYGRVPYPGM SNPEVIRNLE RGYRMPRPDS CPPELYNGII ENSTTRP00000011323/1-501 SFGILLMEII TYGRVPYPGM SNPEVIGNLG RGYRMPRPDS CPPELYSSVI BACU015247/1-501 SFGILLMEII TYGRVPYPGM SNPEVIRNLE RGYRMPRPDS CPPELYRSVI 501 550 ENSP00000259089/1-505 AECWRSRPEE RPTFEFLQSV LEDFYTATER QYELQP bmy_17301T0/1-390 ---------- ---------- ---------- ------ ENSBTAP00000006659/1-501 AECWRSRPEE RPTFEFLQSV LEDFHTATEG QYELQP ENSTTRP00000011323/1-501 AECWRSRPEE RPTFEFLQSV LEDFHTATEG QYELQP BACU015247/1-501 AECWRSRPEE RPTFEFLQSV LEDFHTATEG QYELQP