KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:09 2014 Check: 00 .. Name: ENSP00000358183/1-233 Len: 242 Check: 402 Weight: 1.00 Name: ENSBTAP00000006666/1-233 Len: 242 Check: 956 Weight: 1.00 Name: bmy_08528T0/1-151 Len: 242 Check: 7782 Weight: 1.00 Name: BACU004697/1-242 Len: 242 Check: 1286 Weight: 1.00 Name: ENSTTRP00000003142/1-233 Len: 242 Check: 1696 Weight: 1.00 // 1 50 ENSP00000358183/1-233 MWSGLLPPGL NESDAESNSE DEATLENSGL NLQEDKEDES IRKTEIIDFS ENSBTAP00000006666/1-233 MWSGLLPPGL NESDVELNSD DDTTLESSEL NLQEGKEDGT FEKTEMVDIP bmy_08528T0/1-151 MWSGLLPPGL NESDVELNSD DEATVESSEL NLQEGKEDGT ITNTQISDIP BACU004697/1-242 MWSGLLPPGL NESDVESNSD DEATVESSDL NLQEGREDGT ITNTEILDIP ENSTTRP00000003142/1-233 MWSGLLPPGL NESDVELNSD DEATVESSEL NLEEGKEDGT ITNTEVSDIP 51 100 ENSP00000358183/1-233 TDEPKTETES NVNAYEECPS GIPIDMWNKF QELHKKHSEQ KSTTSRFRGK ENSBTAP00000006666/1-233 TDGPSTEAEA NINAYEECPS GIPLNMWNKF QELHKKHSEQ KTSASRSEKK bmy_08528T0/1-151 TDGPXTEAEA NVNAYEECPS GIPLNMWNKF QELHTKHSEQ KTSTSRSRKK BACU004697/1-242 TDGPKTEAEA NVNAYEECPS GIPLNMWNKF QELHTKHSEQ KTSTSRSRKK ENSTTRP00000003142/1-233 TDGPKTEAEA NVNAYEECPS GIPLNMWNKF QELHTKHSEQ KISTSRSRKK 101 150 ENSP00000358183/1-233 RRKRSRK--- ------DKLK NEKELHSEPS SNETQWKELT QYFGVNDRFD ENSBTAP00000006666/1-233 KRKRSRK--- ------GKLK NEEESHSEQS SSETQWKELT QYFGVNERFD bmy_08528T0/1-151 KRKRSRK--- ------GKLK NEEESQSEQS SSETQWKELT QYFGVNDRFD BACU004697/1-242 KRKRSRKGID TVNSFSGKLK NEEESQSEQS SSETQWKELT QYFGVNDRFD ENSTTRP00000003142/1-233 KRKRSRK--- ------GKLK NEEESQSEQS SSETQLKELT QYFGVNDRFD 151 200 ENSP00000358183/1-233 PPVKRKKVEK SGLEKRIDQA VEEWNIEKAE ELSNQLATRE LGVKIAKAVA ENSBTAP00000006666/1-233 PPVKRKKVEK SGLEKRIDQA VEEWNIEKAE ELSNQLATRE LGVKIAKAIA bmy_08528T0/1-151 PPVKRKKIEK ---------- ---------- ---------- ---------- BACU004697/1-242 PPVKRKKIEK SGLEKSIDQA VEEWNVEKAE ELSNQLATRE LGVKIAKAIA ENSTTRP00000003142/1-233 PPVKRKKIEK SGLEKSIDQA VEEWNIEKAE ELSNQLATRE LGVKIAKAIA 201 250 ENSP00000358183/1-233 CHNFVKAKKE VENSQAARKK KKLAWGFEAK KRWETKSNMG YM ENSBTAP00000006666/1-233 CHNFVKAKKE AENSQVARKK KKLAWGFEAK KRWETKSNMG YM bmy_08528T0/1-151 ---------- ---------- ---------- ---------- -- BACU004697/1-242 CHNFVKAKKD AENSQVARKK KKLAWGFEAK KRWETKSNMG YM ENSTTRP00000003142/1-233 CHNFVKAKKD AENSQVARKK KKLAWGFEAK KRWETKSNMG YM