KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:09 2014 Check: 00 .. Name: bmy_05284T0/1-502 Len: 576 Check: 7311 Weight: 1.00 Name: BACU018093/1-420 Len: 576 Check: 1432 Weight: 1.00 Name: ENSP00000219139/1-422 Len: 576 Check: 3751 Weight: 1.00 Name: ENSTTRP00000009687/1-495 Len: 576 Check: 7480 Weight: 1.00 Name: ENSBTAP00000006669/1-422 Len: 576 Check: 7493 Weight: 1.00 // 1 50 bmy_05284T0/1-502 LPQTVLLPPL PQAAAGEVSS GPVRAAAGRP PRRAEPMLDL EVVPERSLGN BACU018093/1-420 ---------- ---------- ---------- ------MLDL EVVPERSLGN ENSP00000219139/1-422 ---------- ---------- ---------- ------MLDL EVVPERSLGN ENSTTRP00000009687/1-495 ---------- ---------- ---------- ------MLDL EVVPERSLGN ENSBTAP00000006669/1-422 ---------- ---------- ---------- ------MLDL EVVPERSLGN 51 100 bmy_05284T0/1-502 EQWEFALGMP LAQAVAILQK HCRIIKNVQV LYSEQSPLSH DLILNLTQDG BACU018093/1-420 EQWEFALGMP LAQAVAILQK HCRIIKNVQV LYSEQSPLSH DLILNLTQDG ENSP00000219139/1-422 EQWEFTLGMP LAQAVAILQK HCRIIKNVQV LYSEQSPLSH DLILNLTQDG ENSTTRP00000009687/1-495 EQWEFALXXX XXXAVAI-QK HCRIIKNVQV LYSEQSPLSH DLILNLTQDG ENSBTAP00000006669/1-422 EQWEFALGMP LAQAVAILQK HCRIIKNVQV LYSEQSPLSH DLILNLTQDG 101 150 bmy_05284T0/1-502 IKLLFDAFNQ RLKVIEVYDL TKVKLKYCGV HFNSQAIAPT IEQIDQSFGA BACU018093/1-420 IKLLFDAFNQ RLKVIEVYDL TKVKLKYCGV HFNSQAIAPT IEQIDQSFGA ENSP00000219139/1-422 IKLMFDAFNQ RLKVIEVCDL TKVKLKYCGV HFNSQAIAPT IEQIDQSFGA ENSTTRP00000009687/1-495 IKLLFDAFNQ RLKVIEVYDL TKVKLKYCGV HFNSQAIAPT IEQIDQSFGA ENSBTAP00000006669/1-422 IKLLFDAFNQ RLKVIEVYDL TKVKLKYCGV HFNSQAIAPT IEQIDQSFGA 151 200 bmy_05284T0/1-502 THPG------ ---------- ---------- ---------- ---------- BACU018093/1-420 THPG------ ---------- ---------- ---------- ---------- ENSP00000219139/1-422 THPG------ ---------- ---------- ---------- ---------- ENSTTRP00000009687/1-495 THPGGKPSPF DSSGHLPCSC RIWGLVLGCE GKLFPLVFSL VGQFRNETQG ENSBTAP00000006669/1-422 THPG------ ---------- ---------- ---------- ---------- 201 250 bmy_05284T0/1-502 ---------- ---------- --------VY NSAEQLFHLN FRGLSFSFQL BACU018093/1-420 ---------- ---------- --------VY NSAEQLFHLN FRGLSFSFQL ENSP00000219139/1-422 ---------- ---------- --------VY NSAEQLFHLN FRGLSFSFQL ENSTTRP00000009687/1-495 RCCQPLLPAR LVCVHNFCHS TMPSSPLTVY NSAEQLFHLN FRGLSFSFQL ENSBTAP00000006669/1-422 ---------- ---------- --------VY NSAEQLFHLN FRGLSFSFQL 251 300 bmy_05284T0/1-502 DSWTEAPKYE VSLSLSLIFI APCPAQFCPW SGFSPDTPWS NCEANVHLQW BACU018093/1-420 DSWTEAPKYE PSFAHGLASL ---------- ---------- ---------- ENSP00000219139/1-422 DSWTEAPKYE PNFAHGLASL ---------- ---------- ---------- ENSTTRP00000009687/1-495 DSWTEAPKYE PNFAHGLASL ---------- ---------- ---------- ENSBTAP00000006669/1-422 DSWTEAPKYE PNFAHGLASL ---------- ---------- ---------- 301 350 bmy_05284T0/1-502 KQPTGYQVRV GEHKLHAKAM GSLGGRAKPL LTVPSPRAPA MPLSCFLGNV BACU018093/1-420 QTTQEAIV-- -------KRI AEYHWR---- -RLD--RAPA MPLSCFLGNV ENSP00000219139/1-422 QIPHGATV-- -------KRM YIYSGN---- -SLQDTKAPM MPLSCFLGNV ENSTTRP00000009687/1-495 QIPHGATV-- -------KRM YIYSGN---- -SLQDTKAPA MPLSCFLGNV ENSBTAP00000006669/1-422 QIPHGATV-- -------KRM YIYSGN---- -SLQDTKAPV MPLSCFLGNV 351 400 bmy_05284T0/1-502 YAESVDVLRD GTGPSGLRLR LLAAGCGPGL LADAKMRVFE RSVYFGDSCQ BACU018093/1-420 YAESVDVLRD GTGPSGLRLR LLAAGCGPGL LADAKMRVFE RSVYFGDSCQ ENSP00000219139/1-422 YAESVDVLRD GTGPAGLRLR LLAAGCGPGL LADAKMRVFE RSVYFGDSCQ ENSTTRP00000009687/1-495 YAESVDVLRD GTGPSGLRLR LLAAGCGPGL LADAKMRVFE RSVYFGDSCQ ENSBTAP00000006669/1-422 YAESVDVLRD GTGPSGLRLR LLAAGCGPGL LADAKMRVFE RSVYFGDSCQ 401 450 bmy_05284T0/1-502 DVLSMLGSPH KVFYKSEDKM KIHSPSPHKQ VPSKCNDYFF NYFTLGVDIL BACU018093/1-420 DVLSMLGSPH KVFYKSEDKM KIHSPSPHKQ VPSKCNDYFF NYFTLGVDIL ENSP00000219139/1-422 DVLSMLGSPH KVFYKSEDKM KIHSPSPHKQ VPSKCNDYFF NYFTLGVDIL ENSTTRP00000009687/1-495 DVLSMLGSPH KVFYKSEDKM KIHSPSPHKQ VPSKCNDYFF NYFTLGVDIL ENSBTAP00000006669/1-422 DVLSMLGSPH KVFYKSEDKM KIHSPSPHKQ VPSKCNDYFF NYFTLGVDIL 451 500 bmy_05284T0/1-502 FDANTHKVKK FVLHTNYPGH YNFNIYHRCE FKIPLTVKRE NTDGQTETCT BACU018093/1-420 FDANTHKVKK FVLHTNYPGH YNFNIYHRCE FKIPLTIKRE NTDGQTETCT ENSP00000219139/1-422 FDANTHKVKK FVLHTNYPGH YNFNIYHRCE FKIPLAIKKE NADGQTETCT ENSTTRP00000009687/1-495 FDANTHKVKK FVLHTNYPGH YNFNIYHRCE FKIPLTVKRE NTDGQTETCT ENSBTAP00000006669/1-422 FDANTHKVKK FVLHTNYPGH YNFNIYHRCE FKIPLTVKRE NTEGQTETCT 501 550 bmy_05284T0/1-502 TYSKWDNIQE LLGHPVEKPV VLHRSSSPNN TNPFGSTFCF GLQRMIFEVM BACU018093/1-420 TYSKWDNIQE LLGHPVEKPV VLHRSSSPNN TNPFGSTFCF GLQRMIFEVM ENSP00000219139/1-422 TYSKWDNIQE LLGHPVEKPV VLHRSSSPNN TNPFGSTFCF GLQRMIFEVM ENSTTRP00000009687/1-495 TYSKWDNIQD LLGHPVEKPV VLHRSSSPNN TNPFGSTFCF GLQRMIFEVM ENSBTAP00000006669/1-422 TYSKWDNIQE LLGHPVEKPV VLHRSSSPNN TNPFGSTFCF GLQRMIFEVM 551 600 bmy_05284T0/1-502 QNNHIASVTL YGPPRPGAHL RTTELP BACU018093/1-420 QNNHIASVTL YGPPRPGAHL RTAELP ENSP00000219139/1-422 QNNHIASVTL YGPPRPGSHL RTAELP ENSTTRP00000009687/1-495 QNNHIASVTL YGPPRPGAHL RTAELP ENSBTAP00000006669/1-422 QNNHIASVTL YGPPRPGAHL RTAELP