KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:10 2014 Check: 00 .. Name: ENSTTRP00000003235/1-199 Len: 242 Check: 8150 Weight: 1.00 Name: ENSP00000419475/1-199 Len: 242 Check: 1809 Weight: 1.00 Name: bmy_16913T0/1-183 Len: 242 Check: 950 Weight: 1.00 Name: BACU018756/1-199 Len: 242 Check: 3488 Weight: 1.00 Name: ENSBTAP00000006676/1-199 Len: 242 Check: 2913 Weight: 1.00 // 1 50 ENSTTRP00000003235/1-199 ---------- ---------- ---------- ---------- ---MLLNLSK ENSP00000419475/1-199 ---------- ---------- ---------- ---------- ---MLLELSE bmy_16913T0/1-183 DGGKPEPKAR DADTPEPFYA WTQGPEVARA GSALRGEIGQ PEKMLLDLSE BACU018756/1-199 ---------- ---------- ---------- ---------- ---MLLDLSE ENSBTAP00000006676/1-199 ---------- ---------- ---------- ---------- ---MLLDLSE 51 100 ENSTTRP00000003235/1-199 EHKEHLALPA QVNSAVVLEF GRIAVKFLRR ASNPKIYXXX XXKLSVSSDT ENSP00000419475/1-199 EHKEHLAFLP QVDSAVVAEF GRIAVEFLRR GANPKIYEGA ARKLNVSSDT bmy_16913T0/1-183 EHKEHLAFLP QVDSAVVAEF GRIAVEFLRR GSNPKIYEGA ARKLSVSSDT BACU018756/1-199 EHKEHLAFLP QVDSAVVAEF GRIAVEFLRR GSNPKIYEGA ARKLSVSSDT ENSBTAP00000006676/1-199 EHKEHLAFLP KVDSAVVAEF GRIAVEFLRR GSNPKIYEGA ARKLSVSSDT 101 150 ENSTTRP00000003235/1-199 VQHGVEGLIH LLTESSKLMI SELDFQDSVF VLGFSEELNK LLLQLYLDNR ENSP00000419475/1-199 VQHGVEGLTY LLTESSKLMI SELDFQDSVF VLGFSEELNK LLLQLYLDNR bmy_16913T0/1-183 VQHGVEGLIH LLTESSKLMI SELDFQDSVF VLGFSEELNK LLLQLYLDNR BACU018756/1-199 VQHGVEGLIH LLTESSKLMI SELDFQDSVF VLGFSEELNK LLLQLYLDNR ENSBTAP00000006676/1-199 VQHGVEGLIY LLTESSKLMI SELDFQDSVF ILGFPEELNK LLLQLYLDNR 151 200 ENSTTRP00000003235/1-199 KEIRTILSEL APDLPSYHSL EWRLDVQLAS RSLRQQMKPS VTIKLHLNQN ENSP00000419475/1-199 KEIRTILSEL APSLPSYHNL EWRLDVQLAS RSLRQQIKPA VTIKLHLNQN bmy_16913T0/1-183 KEIRTILSEL APDLPSYHSL EWRLDVQV-- ---------- ---------- BACU018756/1-199 KEIRTILSEL APDLPSYHSL EWRLDVQLAS RSLRQQMKPS VTIKLHLNQN ENSBTAP00000006676/1-199 KEIRTILSEL APDLPSYHSL EWRLDVQLAS RSLRQQIKPS VTIKLHLNQN 201 250 ENSTTRP00000003235/1-199 GDHNTQVLQT DPATLLHLVQ QLEQALEEMK TNHCRRVVRN IK ENSP00000419475/1-199 GDHNTKVLQT DPATLLHLVQ QLEQALEEMK TNHCRRVVRN IK bmy_16913T0/1-183 ---------- --LTPLH--- ---------- ---------- -- BACU018756/1-199 GDHNTQVLQT DPATLLHLVQ QLEQALEEMK TNHCRRVVRN IK ENSBTAP00000006676/1-199 GDHNTQVLQT DPATLLHLVQ QLEQALEEMK TNHCRRVVRN IK