KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:15 2014 Check: 00 .. Name: BACU006844/1-150 Len: 615 Check: 1771 Weight: 1.00 Name: ENSTTRP00000012482/1-255 Len: 615 Check: 6758 Weight: 1.00 Name: ENSP00000411145/1-475 Len: 615 Check: 3124 Weight: 1.00 Name: bmy_21485T0/1-600 Len: 615 Check: 5017 Weight: 1.00 Name: ENSBTAP00000006726/1-476 Len: 615 Check: 2589 Weight: 1.00 // 1 50 BACU006844/1-150 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 ---------- ---------- ---------- ---------- ---------- bmy_21485T0/1-600 MVQTRLRPRR LRDSRSPQPQ ALEEERGLRR RQRGSDPGPP RARRNHAGEG ENSBTAP00000006726/1-476 ---------- ---------- ---------- ---------- ---------- 51 100 BACU006844/1-150 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 ---------- ---------- ---------- ---------- ---------- bmy_21485T0/1-600 SDFSCRRLPG RCFLEPGSLV RQELCDGLAG VHWAGQAGSA GDAGEEEEEA ENSBTAP00000006726/1-476 ---------- ---------- ---------- ---------- ---------- 101 150 BACU006844/1-150 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 ---------- ---------- ---------- ------MDSS CHNATTKMLA bmy_21485T0/1-600 AGGDGARPPL RRSVTSREQG NDGAARPRLT DAGDSDMDSS CHDATAKMLA ENSBTAP00000006726/1-476 ---------- ---------- ---------- ------MDSS CHNATAKMLA 151 200 BACU006844/1-150 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012482/1-255 --PA------ ---------E KSLAR----- ---------- ---------- ENSP00000411145/1-475 TAPARGNMMS TSKPLAFSIE RIMARTPEPK ALPVPHFLQG ALPKGEPKHS bmy_21485T0/1-600 TAPARGSVMN TSKPLAFSIE RIMARTPEPK ALPVPHFLQG AVPKGDPKHS ENSBTAP00000006726/1-476 TAPARGNVMN TSKPLAFSIE RIMARTPEPK ALPVPHFLQG AVPKGDPKHS 201 250 BACU006844/1-150 ---------- ---------- --MQSVSGLP PR-------- ---------- ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 LHLNSSIPCM IPFVPVAYDT SPKAGVTGSE PRKASLEAPA APAAVPSAPA bmy_21485T0/1-600 LHLNSSIPCM IPFVPVAYDT SPKAGMTGSE PRKASLEAPA APAVAPAAPA ENSBTAP00000006726/1-476 LHLNSSIPCM IPFVPVAYDT NPKAGMTGAE PRKASLEAPG APASAPAAPA 251 300 BACU006844/1-150 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 FSCSDLLNCA LSLKGDLARD ALPLQQYKLV RPRVVNHSSF HAMGALCYLN bmy_21485T0/1-600 FSCSDLLNCA LSLKGDLARD ALPLQQYKLV RPRVVNHSSF HAMGALCYLN ENSBTAP00000006726/1-476 FSCSDLLNCA LSLKSDLARD ALPLQQYKLV RPRVVNHSSF HAMGALCYLN 301 350 BACU006844/1-150 ---------- ---------- ---------- ---------- --------PQ ENSTTRP00000012482/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000411145/1-475 RGDGPCHPAA GVNIHPVASY FLSSPLHPQP KTYLAERNKL VVPAVEKYPS bmy_21485T0/1-600 RGDGPCHPAA GVNIHPVASY FLSSPLHPQP KTYLAERNKL VVPAVEKYPS ENSBTAP00000006726/1-476 RGDGPCHPAA GVNIHPVASY FLSSPLHPQP KTYLAERNKL VVPAVEKYPS 351 400 BACU006844/1-150 G--------- ---H------ ---------- ----SRPGP- ---------- ENSTTRP00000012482/1-255 --AYKDMSPV QLQH-MKESA QLLSEKIVFK ASELSRGSPH TKPKVFTCE- ENSP00000411145/1-475 GVAFKDLSQA QLQHYMKESA QLLSEKIAFK TSDFSRGSPN AKPKVFTCEV bmy_21485T0/1-600 GVAFKDLSQA QLQHYMKESA QLLSEKIAFK TSDFSRGSPH TKPKVFTCE- ENSBTAP00000006726/1-476 GVAFKDLSQA QLQHYMKESA QLLSEKIAFK TSDFSRGSPN TKPKVFTCEV 401 450 BACU006844/1-150 ---------- ---------- -----AAIVG EGVREL---- ---------- ENSTTRP00000012482/1-255 ---VFNAHYN LTRHMPVHTG ARPFVCKVCG KGFRQASTLC RHKIIHTQEK ENSP00000411145/1-475 CGKVFNAHYN LTRHMPVHTG ARPFVCKVCG KGFRQASTLC RHKIIHTQEK bmy_21485T0/1-600 ---VFNAHYN LTRHMPVHTG ARPFVCKVCG KGFRQASTLC RHKIIHTQEK ENSBTAP00000006726/1-476 CGKVFNAHYN LTRHMPVHTG ARPFVCKVCG KGFRQASTLC RHKIIHTQEK 451 500 BACU006844/1-150 ---------- --REGAL--- ---------- ---------- --GNYKNHKL ENSTTRP00000012482/1-255 PHKCNQCGKA FNRSSTLNTH TRIHAGYKPF VCEFCGKGFH QKGNYKNHKL ENSP00000411145/1-475 PHKCNQCGKA FNRSSTLNTH TRIHAGYKPF VCEFCGKGFH QKGNYKNHKL bmy_21485T0/1-600 PHKCNQCGKA FNRSSTLNTH TRIHAGYKPF VCEFCGKGFH QKGNYKNHKL ENSBTAP00000006726/1-476 PHKCNQCGKA FNRSSTLNTH TRIHAGYKPF VCEFCGKGFH QKGNYKNHKL 501 550 BACU006844/1-150 THSGEKQFKC NICSKAFHQI YNLTFHMHTH NDKKPFTCPT CGKGFCRNFD ENSTTRP00000012482/1-255 THSGEKQFKC NICNKAFHQI YNLTFHMHTH NDKKPFTCPT CGKGFCRNFD ENSP00000411145/1-475 THSGEKQFKC NICNKAFHQV YNLTFHMHTH NDKKPFTCPT CGKGFCRNFD bmy_21485T0/1-600 THSGEKQFKC NICNKAFHQI YNLTFHMHTH NDKKPFTCPT CGKGFCRNFD ENSBTAP00000006726/1-476 THSGEKQFKC NICNKAFHQV YNLTFHMHTH NDKKPFTCPT CGKGFCRNFD 551 600 BACU006844/1-150 LKKHVRKLHD SGLGLPPASA VEPGADPSPP LQQPS----- ---PAPLPPL ENSTTRP00000012482/1-255 LKKHVRKLHD SGLGLPCTSA GEPGADPSPP LQQPL----- ---PAPL--- ENSP00000411145/1-475 LKKHVRKLHD SSLGLARTPA GEPGTEPPPP LPQQP-PMTL PPLQPPL--- bmy_21485T0/1-600 LKKHVRKLHD SGLGLPRTSA GEPGADPSPP LQQPS----- ---PAPL--- ENSBTAP00000006726/1-476 LKKHVRKLHD SGLGLPRPSA GEPGADPSPP LQPPPPPATL PPLPPPL--- 601 650 BACU006844/1-150 PPPGPLQPGF PPGHQ ENSTTRP00000012482/1-255 PPPGPLQPGL PPGHQ ENSP00000411145/1-475 PTPGPLQPGL HQGHQ bmy_21485T0/1-600 PHPGPLQPGF PPGHQ ENSBTAP00000006726/1-476 PPPGPLQPGL HPGHQ