KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:19 2014 Check: 00 .. Name: ENSBTAP00000006752/1-823 Len: 1054 Check: 1915 Weight: 1.00 Name: ENSP00000218343/1-823 Len: 1054 Check: 3572 Weight: 1.00 Name: BACU010358/1-1054 Len: 1054 Check: 1536 Weight: 1.00 Name: bmy_18403T0/1-450 Len: 1054 Check: 6882 Weight: 1.00 Name: ENSTTRP00000009153/1-823 Len: 1054 Check: 9330 Weight: 1.00 // 1 50 ENSBTAP00000006752/1-823 MKRHRNISSS DSSEDNPCTS STFGSMYRSK SKMPNERKKP AEVFRKDLIS ENSP00000218343/1-823 MKRHRPVSSS DSSDESPSTS FTSGSMYRIK SKIPNEHKKP AEVFRKDLIS BACU010358/1-1054 MKRHRTLSSS DSSDESPSTS FTSGSMYRSK SKIPNEHKKP AEVFRKDLIS bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 MKRHRTLSSS DSSDESPSTS FTSGSMYRSK SKIPNEHKKP AEVFRKDLIS 51 100 ENSBTAP00000006752/1-823 AMKIPDSHHI NPDNYYLFTD TWKEEWEKGV QVPANPDTLP QPSVRVMADK ENSP00000218343/1-823 AMKLPDSHHI NPDSYYLFAD TWKEEWEKGV QVPASPDTVP QPSLRIIAEK BACU010358/1-1054 AMKLPDSHHI NPDSYYLFAD TWKEEWEKGV QVPASPDTVP QPSLRIVADK bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 AMKLPDSHHI NPDSYYLFAD TWKEEWEKGV QVPASPDAVP QPSLRIVADK 101 150 ENSBTAP00000006752/1-823 KKEVLFVRPR KYIQCSNPET TEPGYINIVE LAASVCRYDL DDMDIFWLQE ENSP00000218343/1-823 VKDVLFIRPR KYIHCSSPDT TEPGYINIME LAASVCRYDL DDMDIFWLQE BACU010358/1-1054 VKEVLFIRPR KYIHCSSPET AEPGYINIME LAASVCRYDL DDMDIFWLQE bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 VKEVLFIRPR KYIHCSSPET AEPGYINIME LAASVCRYDL DDMDIFWLQE 151 200 ENSBTAP00000006752/1-823 LNEDLTAMGY GPVDENLMEK TVEVLERHCH ENMNHAIETE EGLGIEYDED ENSP00000218343/1-823 LNEDLAEMGC GPVDENLMEK TVEVLERHCH ENMNHAIETE EGLGIEYDED BACU010358/1-1054 LNENLAEMGC GPVDENLLEK TVEVLERHCH ENMNHAIETE EGLGIEYDED bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 LNEDLAEMGC GPVDENLMEK TVEVLERHCH ENMNHAIETE EGLGIEYDED 201 250 ENSBTAP00000006752/1-823 VICDVCRSPD SEEGNDMVFC DKCNICVHQA CYGILKVPEG SWLCRSCVLG ENSP00000218343/1-823 VICDVCRSPD SEEGNDMVFC DKCNVCVHQA CYGILKVPEG SWLCRSCVLG BACU010358/1-1054 VICDVCRSPD SEEGNDMVFC DKCNICVHQA CYGILKVPEG SWLCRSCVLG bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 VICDVCRSPD SEEGNDMVFC DKCNICVHQA CYGILKVPEG SWLCRSCVLG 251 300 ENSBTAP00000006752/1-823 IYPQCLLCPK KGGAMKSTKT GTKWAHVSCA LWIPEVSIAC PERMEPITKI ENSP00000218343/1-823 IYPQCVLCPK KGGALKTTKT GTKWAHVSCA LWIPEVSIAC PERMEPITKI BACU010358/1-1054 IHPQCLLCPK KGGAMKTTRT GTKWAHVSCA LWIPEVSIAC PERMEPITKV bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 IHPQCLLCPK KGGAMKTTRT GTKWAHVSCA LWIPEVSIAC PERMEPITKV 301 350 ENSBTAP00000006752/1-823 SHIPPSRWAL VCSLCKLKTG ACIQCSIKSC ITAFHVTCAF EHSLEMKTIL ENSP00000218343/1-823 SHIPPSRWAL VCNLCKLKTG ACIQCSIKSC ITAFHVTCAF EHGLEMKTIL BACU010358/1-1054 SHIPPSRWAL VCNLCKLKTG ACIQCSVKSC ITAFHVTCAF EHNLEMKTIL bmy_18403T0/1-450 ---------- ---------- ---------- ---------- -----MKTIL ENSTTRP00000009153/1-823 SHIPPSRWAL VCNLCKLKTG ACIQCSVKSC ITAFHVTCAF EHSLEMKTIL 351 400 ENSBTAP00000006752/1-823 DKGDEVKFKS YCLKHSQSRQ KLRESEYPLH RASEQSQAKS EKTSLRAQKL ENSP00000218343/1-823 DEGDEVKFKS YCLKHSQNRQ KLGEAEYPHH RAKEQSQAKS EKTSLRAQKL BACU010358/1-1054 DEGDEVKFKS YCLKHSQNRQ KLGEAEYPLH RASEQGQTKS EKTSVRAQKL bmy_18403T0/1-450 DEGDEVKFKS YCLKHSQNRQ KLGEAEYPLH RASEQGQTKS EKTSVRAQKL ENSTTRP00000009153/1-823 DDGDEVKFKS YCLKHSQNRQ KLGEAEYPLH RASEQGQTKS EKTSVRAQKL 401 450 ENSBTAP00000006752/1-823 RELEEEFYSM VNVEDVATEL GLPMLIVDFI YNYWKLKRKS NFNKPLFPPK ENSP00000218343/1-823 RELEEEFYSL VRVEDVAAEL GMPTLAVDFI YNYWKLKRKS NFNKPLFPPK BACU010358/1-1054 RELEEEFYSL VRVEDVAAEL GLPTLAVDFI YNYWKLKRKS NFNKPLFPPK bmy_18403T0/1-450 RELEEEFYCL VRVEDVAAEL GLPTLAVDFI YNYWKLKRKS NFNKPLFPPK ENSTTRP00000009153/1-823 RELEEEFYSL VRVEDVAAEL GLPTLAVDFI YNYWKLKRKS NFNKPLFPPK 451 500 ENSBTAP00000006752/1-823 EEEENVLVQP REESIHTRMR MFMHLRQDLE RVRNLCYMIS RREKMKLSYN ENSP00000218343/1-823 EDEENGLVQP KEESIHTRMR MFMHLRQDLE RVRNLCYMIS RREKLKLSHN BACU010358/1-1054 EDEENGLVQP KEESIHTRMR MFMHLRQDLE RVRNLCYMIT RREKLKLSQI bmy_18403T0/1-450 EDEENGLVQP KEESIHTRMR MFMHLRQDLE RVRNLCYMIT RREKLKLSQI ENSTTRP00000009153/1-823 EDEENGLVQP KEESIHTRMR MFMHLRQDLE RVRNLCYMIT RREKLKLSQT 501 550 ENSBTAP00000006752/1-823 KLQEQIFGLQ VKLANEEVAA GLPVTNALEN SLFYPPPRIT LKLKMPKSAT ENSP00000218343/1-823 KIQEQIFGLQ VQLLNQEIDA GLPLTNALEN SLFYPPPRIT LKLKMPKSTP BACU010358/1-1054 KIQEQIFSLQ VQLANQEVAA GLPLTNAVEN SLFYPPPRIT LKLKMPKSAL bmy_18403T0/1-450 KIQEQIFSLQ VQLANQEVAA ---------- ---------- --------AP ENSTTRP00000009153/1-823 KIQEQIFSLQ VQLANQEIAA GLPLTNALEN SLFYPPPRIT LKLKMPKSAP 551 600 ENSBTAP00000006752/1-823 EDGSNSSTEP DHGPLYPDDS SPACNMRSMQ VAQDSLEMRM KSYPKHPQES ENSP00000218343/1-823 EDHRNSSTET DQQPHSPDSS SSVHSIRNMQ VPQESLEMRT KSYPRYPLES BACU010358/1-1054 EDCRNSSTEP EHGPLSPDGS SPVCNMRSMQ VAQESLEMRM KSYPRYPLES bmy_18403T0/1-450 EDCRNSSTEP DHGPLSPDGS SPVCNMRSMQ VAQESLEMRM KSYPRYPLES ENSTTRP00000009153/1-823 EDCRNSSTEP DHGPLSPDGS SPVCNMRSMQ VAQESLEMRM KSYPRYPLES 601 650 ENSBTAP00000006752/1-823 QTDCLLTNPS DDRSEAEDPS PACKPPSPKF YHGQSLGKPL VLQAALHGQS ENSP00000218343/1-823 KNNRLLASLS HSRSEAKESS PAWRTPSSEC YHGQSLGKPL VLQAALHGQS BACU010358/1-1054 KNNCLPASLN HARSEAKDPS PAWRTPSPEF YHGQSLGKPL VLQAALHGQS bmy_18403T0/1-450 KNNCLPASLS HARSEAKDPS PAWRTPSPEF YHGQSLGKPL VLQAALHGQS ENSTTRP00000009153/1-823 KNNCLPASLS HARSEAKDPS PAWITPSPEF YHGQSLGKPL VLQAALHGQS 651 700 ENSBTAP00000006752/1-823 SIGNGKNQPN PKFAKSNGLE GTWSGDVTQK DSSGEMFSDQ EPMLSSHLGS ENSP00000218343/1-823 SIGNGKSQPN SKFAKSNGLE GSWSGNVTQK DSSSEMFCDQ EPVFSPHLVS BACU010358/1-1054 SIGNGKSQPN SKFAKSNGLE GSWSGDVTQK DSSSEMFCDQ EPMLSSHLGS bmy_18403T0/1-450 SIGNGKSQPN SKFAKSNGLE GSWSGDVTQK DSSSEMFCDQ EPMLSSHLGS ENSTTRP00000009153/1-823 SIGNGKSQPN SKFAKSNGLE GSWSGDATQK DSSSEMFCDQ EPMLSSHLGS 701 750 ENSBTAP00000006752/1-823 QGSLRKSTVE HSSRSFKETT NKWVKITENL QRYVKAAKNI NPKEQLWGKQ ENSP00000218343/1-823 QGSFRKSTVE HFSRSFKETT NRWVKNTEDL QCYVKPTKNM SPKEQFWGRQ BACU010358/1-1054 QGSFRKSTME HFSRSFKEAT NRWVRTTEDL PCYVKPTKNI NPKEQLWGRQ bmy_18403T0/1-450 QGSFRKSTME HFSRSFKEAT NRWVRTTEDL PCYVKPTKNI NPKEQLWGRQ ENSTTRP00000009153/1-823 QGSFRKSTME HFSRSFKEAT NRWVRTTEDL PCYVKPTKNT NPKEQLWGRQ 751 800 ENSBTAP00000006752/1-823 LVRRSAGRAP YQENDGYCPD VELSDSEAES DGNDEKVRVK R--------- ENSP00000218343/1-823 VLRRSAGRAP YQENDGYCPD LELSDSEAES DGNKEKVRVR K--------- BACU010358/1-1054 FVRRSAGRAP YQENDGYCPD LELSDSEAES DGNKEKVRIE CVLRENWRCG bmy_18403T0/1-450 FVRRSAGRAP YQENDGYCPD LELSDSEAES DGNKEKVRVK R--------- ENSTTRP00000009153/1-823 FVRRSAGRAP YQENDGYCPD LELSDSEAES DGNKEKVRVK R--------- 801 850 ENSBTAP00000006752/1-823 ---------- ---------- ---------- ---------- ---------- ENSP00000218343/1-823 ---------- ---------- ---------- ---------- ---------- BACU010358/1-1054 ESPVWEEASN SLLFVDIPAK TVCRWDSLSK QVQQVTVDAP VSSVALRQSG bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 ---------- ---------- ---------- ---------- ---------- 851 900 ENSBTAP00000006752/1-823 ---------- ---------- ------ESSD RENPPHDSKR DCHGK----- ENSP00000218343/1-823 ---------- ---------- ------DSSD RENPPHDSRR DCHGK----- BACU010358/1-1054 GYVATVGTKF CALNWDDQSA VVLATVDKDK KNNRFNDGKV DPAGRYFAGT bmy_18403T0/1-450 ---------- ---------- ------DSSD RENPPHDSRR DCRGK----- ENSTTRP00000009153/1-823 ---------- ---------- ------DSSD RENPPHDSRR DCHGK----- 901 950 ENSBTAP00000006752/1-823 ---------- ---------- ---------- ---------- ---------- ENSP00000218343/1-823 ---------- ---------- ---------- ---------- ---------- BACU010358/1-1054 MAEETAPAVL ERRQGSLYSL FPDHHVEKYF DQVDISNGLD WSLDHKIFYY bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSBTAP00000006752/1-823 ---------- ---------- ---------- ---------- ---------- ENSP00000218343/1-823 ---------- ---------- ---------- ---------- ---------- BACU010358/1-1054 IDSLSYSVDA FDYDLQTGKI SNRRSVYKLE KEEQIPDGMC IDVEGKLWVA bmy_18403T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009153/1-823 ---------- ---------- ---------- ---------- ---------- 1001 1050 ENSBTAP00000006752/1-823 ---------- --------SK TY--PVSHSS MQR------- ---------- ENSP00000218343/1-823 ---------- --------SK TH--PLSHSS MQR------- ---------- BACU010358/1-1054 CYNGGRVIRL DPETGNPGEK LYAIPLDSPE LSGMGFAKLS FQSASGQFCV bmy_18403T0/1-450 ---------- --------SK TY--PLSHSS MHR------- ---------- ENSTTRP00000009153/1-823 ---------- --------SK TY--PLSHSS MHR------- ---------- 1051 1100 ENSBTAP00000006752/1-823 ---- ENSP00000218343/1-823 ---- BACU010358/1-1054 VCKI bmy_18403T0/1-450 ---- ENSTTRP00000009153/1-823 ----