KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:20 2014 Check: 00 .. Name: ENSP00000309474/1-953 Len: 953 Check: 2156 Weight: 1.00 Name: BACU010970/1-817 Len: 953 Check: 9860 Weight: 1.00 Name: ENSBTAP00000006754/1-953 Len: 953 Check: 3125 Weight: 1.00 Name: ENSTTRP00000015252/1-949 Len: 953 Check: 7890 Weight: 1.00 Name: bmy_04901T0/1-608 Len: 953 Check: 6495 Weight: 1.00 // 1 50 ENSP00000309474/1-953 MITSAAGIIS LLDEDEPQLK EFALHKLNAV VNDFWAEISE SVDKIEVLYE BACU010970/1-817 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006754/1-953 MITSAAGIIS LLDEEEPQLK EFALHKLNAV VNDFWAEISE SVDKIEVLYE ENSTTRP00000015252/1-949 MITSAAGIIS LLDEEEPQLK EFALHKLNAV VNDFWAEISE SVDKIEVLYE bmy_04901T0/1-608 ------GIIS LLDEEEPQLK EFALHKLNAV VNDFWAEISE SVDKIEVLYE 51 100 ENSP00000309474/1-953 DEGFRSRQFA ALVASKVFYH LGAFEESLNY ALGAGDLFNV NDNSEYVETI BACU010970/1-817 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006754/1-953 DEGFRSRQFA ALVASKVFYH LGAFEESLNY ALGAGDLFNV NDNSEYVETI ENSTTRP00000015252/1-949 DEGFRSRQFA ALVASKVFYH LGAFEESLNY ALGAGDLFNV NDNSEYVETI bmy_04901T0/1-608 DEGFRSRQFA ALVASKVFYH LGAFEESLNY ALGAGDLFNV NDNSEYVETI 101 150 ENSP00000309474/1-953 IAKCIDHYTK QCVENADLPE GEKKPIDQRL EGIVNKMFQR CLDDHKYKQA BACU010970/1-817 ---------- ---------- ---------- ------MFQR CLDDHKYKQA ENSBTAP00000006754/1-953 IAKCIDHYTK QCVENADLPE GEKKPIDQRL EGIVNKMFQR CLDDHKYKQA ENSTTRP00000015252/1-949 IAKCIDHYTK QCVENADLPE GEKKPIDQRL EGIVNKMFQR CLDDHKYKQA bmy_04901T0/1-608 IAKCIDHYTK QCVENADLPE GEKKPIDQRL EGIVNKMFQR CLDDHKYKQA 151 200 ENSP00000309474/1-953 IGIALETRRL DVFEKTILES NDVPGMLAYS LKLCMSLMQN KQFRNKVLRV BACU010970/1-817 IGIALETRRL DVFEKTILES NDVPGMLAYS LKLCMSLMQN KQFRNKVLRV ENSBTAP00000006754/1-953 IGIALETRRL DVFEKTILES NDVPGMLAYS LKLCMSLMQN KQFRNKVLRV ENSTTRP00000015252/1-949 IGIALETRRL DVFEKTILES NDVPGMLAYS LKLCMSLMQN KQFRNKVLRV bmy_04901T0/1-608 IGIALETRRL DVFEKTILES NDVPGMLAYS LKLCMSLMQN KQFRNKVLRV 201 250 ENSP00000309474/1-953 LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVKED NLLMAYQICF BACU010970/1-817 LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVKED NLLMAYQICF ENSBTAP00000006754/1-953 LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVKED NLLMAYQICF ENSTTRP00000015252/1-949 LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVKED NLLMAYQICF bmy_04901T0/1-608 LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVKED NLLMAYQICF 251 300 ENSP00000309474/1-953 DLYESASQQF LSSVIQNLRT VGTPIASVPG STNTGTVPGS EKDSDSMETE BACU010970/1-817 DLYESASQQF LSSVIQNLRT VGTPIASVPG STNTGTVPGS EKDSDSMETE ENSBTAP00000006754/1-953 DLYESASQQF LSSVIQNLRT VGTPLASVPG STNTGTVPGS ERESDSMETE ENSTTRP00000015252/1-949 DLYESASQQF LSSVIQNLRT VGTPIASVPG STNTGTVPGS EKDSDSMETE bmy_04901T0/1-608 DLYESASQQF LSSVIQNLRT VGTPIASVPG STNTGTVPGS EKDSDSMETE 301 350 ENSP00000309474/1-953 EKTSSAFVGK TPEASPEPKD QTLKMIKILS GEMAIELHLQ FLIRNNNTDL BACU010970/1-817 EKTGSVLVGK TPEVSPEPKD QTLKMIKILS GEMAIELHLQ FLIRNNNTDL ENSBTAP00000006754/1-953 EKTGSVLVGK TPEVSPEPKD QTLKMIKILS GEMAIELHLQ FLIRNNNTDL ENSTTRP00000015252/1-949 EKTGSVLVGK TPEVSPEPKD QTLKMIKILS GEMAIELHLQ FLIRNNNTDL bmy_04901T0/1-608 EKTGSVLVGK TPEASPEPKD QTLKMIKILS GEMAIELHLQ FLIRNNNTDL 351 400 ENSP00000309474/1-953 MILKNTKDAV RNSVCHTATV IANSFMHCGT TSDQFLRDNL EWLARATNWA BACU010970/1-817 MILKNTKDAV RNSVCHTATV IANSFMHCGT TSDQFLRDNL EWLARATNWA ENSBTAP00000006754/1-953 MILKNTKDAV RNSVCHTATV IANSFMHCGT TSDQFLRDNL EWLARATNWA ENSTTRP00000015252/1-949 MILKNTKDAV RNSVCHTATV IANSFMHCGT TSD----DNL EWLARATNWA bmy_04901T0/1-608 MILKNTKDAV RNSVCHTATV IANSFMHCGT TSDQFLRDNL EWLARATNWA 401 450 ENSP00000309474/1-953 KFTATASLGV IHKGHEKEAL QLMATYLPKD TSPGSAYQEG GGLYALGLIH BACU010970/1-817 KFTATASLGV IHKGHEKEAL QLMATYLPKD TSPGSAYQEG GGLYALGLIH ENSBTAP00000006754/1-953 KFTATASLGV IHKGHEKEAL QLMATYLPKD TSPGSAYQEG GGLYALGLIH ENSTTRP00000015252/1-949 KFTATASLGV IHKGHEKEAL QLMATYLPKD TSPGSAYQEG GGLYALGLIH bmy_04901T0/1-608 KFTATASLGV IHKGHEKEAL QLMATYLPKD TSPGSAYQEG GGLYALGLIH 451 500 ENSP00000309474/1-953 ANHGGDIIDY LLNQLKNASN DIVRHGGSLG LGLAAMGTAR QDVYDLLKTN BACU010970/1-817 ANHGGDIIDY LLNQLKNASN DIVRHGGSLG LGLAAMGTAR QDVYDLLKTN ENSBTAP00000006754/1-953 ANHGGDIIDY LLNQLKNASN DIVRHGGSLG LGLAAMGTAR QDVYDLLKTN ENSTTRP00000015252/1-949 ANHGGDIIDY LLNQLKNASN DIVRHGGSLG LGLAAMGTAR QDVYDLLKTN bmy_04901T0/1-608 ANHGGDIIDY LLNQLKNASN DIVRHGGSLG LGLAAMGTAR QDVYDLLKTN 501 550 ENSP00000309474/1-953 LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ HEKILRGLAV BACU010970/1-817 LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ HEKILRGLAV ENSBTAP00000006754/1-953 LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ HEKILRGLAV ENSTTRP00000015252/1-949 LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ HEKILRGLAV bmy_04901T0/1-608 LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ HEKILRGLAV 551 600 ENSP00000309474/1-953 GIALVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR BACU010970/1-817 GIALVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR ENSBTAP00000006754/1-953 GIALVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR ENSTTRP00000015252/1-949 GIALVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR bmy_04901T0/1-608 GIALVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR 601 650 ENSP00000309474/1-953 RLLHVAVSDV NDDVRRAAVE SLGFILFRTP EQCPSVVSLL SESYNPHVRY BACU010970/1-817 RLLHVAVSDV NDDVRRAAVE SLGFILFRTP EQCPSVVSLL SESYNPHVRY ENSBTAP00000006754/1-953 RLLHVAVSDV NDDVRRAAVE SLGFILFRTP EQCPSVVSLL SESYNPHVRY ENSTTRP00000015252/1-949 RLLHVAVSDV NDDVRRAAVE SLGFILFRTP EQCPSVVSLL SESYNPHVRY bmy_04901T0/1-608 RLLHVAVSTL T--------- ---------- ---------- ---------- 651 700 ENSP00000309474/1-953 GAAMALGICC AGTGNKEAIN LLEPMTNDPV NYVRQGALIA SALIMIQQTE BACU010970/1-817 GAAMALGICC AGTGNKEAIN LLEPMTNDPV NYVRQGALIA SALIMIQQTE ENSBTAP00000006754/1-953 GAAMALGICC AGTGNKEAIN LLEPMTNDPV NYVRQGALIA SALIMIQQTE ENSTTRP00000015252/1-949 GAAMALGICC AGTGNKEAIN LLEPMTNDPV NYVRQGALIA SALIMIQQTE bmy_04901T0/1-608 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000309474/1-953 ITCPKVNQFR QLYSKVINDK HDDVMAKFGA ILAQGILDAG GHNVTISLQS BACU010970/1-817 ITCPKVNQFR QLYSKVINDK HDDVMAKFGA ILAQGILDAG GHNVTISLQS ENSBTAP00000006754/1-953 ITCPKVNQFR QLYSKVINDK HDDVMAKFGA ILAQGILDAG GHNVTISLQS ENSTTRP00000015252/1-949 ITCPKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX GHNVTISLQS bmy_04901T0/1-608 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000309474/1-953 RTGHTHMPSV VGVLVFTQFW FWFPLSHFLS LAYTPTCVIG LNKDLKMPKV BACU010970/1-817 RTGHTHMPSV VGVLVFTQFW FWFPLSHFLS LAYTPTCVIG LNKDLKMPKV ENSBTAP00000006754/1-953 RTGHTHMPSV VGVLVFTQFW FWFPLSHFLS LAYTPTCVIG LNKDLKMPKV ENSTTRP00000015252/1-949 RTGHTHMPSV VGVLVFTQFW FWFPLSHFLS LAYTPTCVIG LNKDLKMPKV bmy_04901T0/1-608 ---------- ---------- -------FLG ---------- ---------- 801 850 ENSP00000309474/1-953 QYKSNCKPST FAYPAPLEVP KEKEKEKVST AVLSITAKAK KKEKEKEKKE BACU010970/1-817 QYKSNCKPST FAYPAPLEVP KEKEKEKVST AVLSITAKAK KKEKEKEKKE ENSBTAP00000006754/1-953 QYKSNCKPST FAYPAPLEVP KEKEKEKVST AVLSITAKAK KKEKEKEKKE ENSTTRP00000015252/1-949 QYKSNCKPST FAYPAPLEVP KEKEKEKVST AVLSITAKAK KKEKEKEKKE bmy_04901T0/1-608 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000309474/1-953 EEKMEVDEAE KKEEKEKKKE PEPNFQLLDN PARVMPAQLK VLTMPETCRY BACU010970/1-817 EEKMEVDEAE KKEEKEKKKE PEPNFQLLDN PARVMPAQLK VLSMPETCRY ENSBTAP00000006754/1-953 EEKMEVDEAE KKEEKEKKKE PEPNFQLLDN PARVMPAQLK VLSMLETCRY ENSTTRP00000015252/1-949 EEKMEVDEAE KKEEKEKKKE PEPNFQLLDN PARVMPAQLK VLSMPETCRY bmy_04901T0/1-608 ---------- ---------- ---------- ---------- ---------- 901 950 ENSP00000309474/1-953 QPFKPLSIGG IIILKDTSED IEELVEPVAA HGPKIEEEEQ EPEPPEPFEY BACU010970/1-817 QPFKPLSIGG IIILKDTSED IEELVEPVAA HGPKIEEEEQ EPEPPEPFEY ENSBTAP00000006754/1-953 QPFKPLSIGG IIILKDTSED IEELVEPVAA HGPKIEEEEQ EPEPPEPFEY ENSTTRP00000015252/1-949 QPFKPLSIGG IIILKDTSED IEELVEPVAA HGPKIEEEEQ EPEPPEPFEY bmy_04901T0/1-608 ---------- ---------- ---------- ---------- ---------- 951 1000 ENSP00000309474/1-953 IDD BACU010970/1-817 IDD ENSBTAP00000006754/1-953 IDD ENSTTRP00000015252/1-949 IDD bmy_04901T0/1-608 ---