KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:20 2014 Check: 00 .. Name: ENSP00000359910/1-248 Len: 251 Check: 778 Weight: 1.00 Name: ENSTTRP00000010473/1-248 Len: 251 Check: 377 Weight: 1.00 Name: ENSBTAP00000006760/1-248 Len: 251 Check: 377 Weight: 1.00 Name: BACU011264/1-216 Len: 251 Check: 472 Weight: 1.00 Name: bmy_20332T0/1-234 Len: 251 Check: 4987 Weight: 1.00 // 1 50 ENSP00000359910/1-248 MSYDRAITVF SPD---GHLF QVEYAQEAVK KGSTAVGVRG RDIVVLGVEK ENSTTRP00000010473/1-248 MSYDRAITVF SPD---GHLF QVEYAQEAVK KGSTAVGVRG KDIVVLGVEK ENSBTAP00000006760/1-248 MSYDRAITVF SPD---GHLF QVEYAQEAVK KGSTAVGVRG KDIVVLGVEK BACU011264/1-216 -MPSQDTSKR APD---TYIY GQ-------- --NTKVGVRG KDIVVLGVEK bmy_20332T0/1-234 --MTRNL-VS APEVQCRHLL KV-------- ------GVRG KDIVVLGVEK 51 100 ENSP00000359910/1-248 KSVAKLQDER TVRKICALDD NVCMAFAGLT ADARIVINRA RVECQSHRLT ENSTTRP00000010473/1-248 KSVAKLQDER TVRKICALDD NVCMAFAGLT ADARIVINRA RVECQSHRLT ENSBTAP00000006760/1-248 KSVAKLQDER TVRKICALDD NVCMAFAGLT ADARIVINRA RVECQSHRLT BACU011264/1-216 KSVAKLQDER TVRKICALDD NVCMAFAGLT ADARIVINRA RVECQSHRLT bmy_20332T0/1-234 KSVAKLQDER TVRKICALDD NVCMAFAGLT ADARIVINRA RVECQSHRLT 101 150 ENSP00000359910/1-248 VEDPVTVEYI TRYIASLKQR YTQSNGRRPF GISALIVGFD FDGTPRLYQT ENSTTRP00000010473/1-248 VEDPVTVEYI TRYIASLKQR YTQSNGRRPF GISALIVGFD FDGTPRLYQT ENSBTAP00000006760/1-248 VEDPVTVEYI TRYIASLKQR YTQSNGRRPF GISALIVGFD FDGTPRLYQT BACU011264/1-216 VEDPVTVEYI TRYIASLKQR YTQSNGRRPF GISALIVGFD FDGTPRLYQT bmy_20332T0/1-234 VEDPVTVEYI TRYIASLKQR YTQSNGRRPF GISALIVGFD FDGTPRLYQT 151 200 ENSP00000359910/1-248 DPSGTYHAWK ANAIGRGAKS VREFLEKNYT DEAIETDDLT IKLVIKALLE ENSTTRP00000010473/1-248 DPSGTYHAWK ANAIGRGAKS VREFLEKNYT DEAIETDDLT IKLVIKALLE ENSBTAP00000006760/1-248 DPSGTYHAWK ANAIGRGAKS VREFLEKNYT DEAIETDDLT IKLVIKALLE BACU011264/1-216 DPSGTYHAWK ANAIGRGAKS VREFLEKNYT DEAIETDDLT IKLVIKALLE bmy_20332T0/1-234 DPSGTYHAWK ANAIGRGAKS VREFLEKNYT DEAIETDDLT IKLVIKALLE 201 250 ENSP00000359910/1-248 VVQSGGKNIE LAVMRRDQSL KILNPEEIEK YVAEIEKEKE ENEKKKQKKA ENSTTRP00000010473/1-248 VVQSGGKNIE LAVMRRDQPL KILNPEEIEK YVAEIEKEKE ENEKKKQKKA ENSBTAP00000006760/1-248 VVQSGGKNIE LAVMRRDQPL KILNPEEIEK YVAEIEKEKE ENEKKKQKKA BACU011264/1-216 ---------- ---------- -ILNPEEIEK YVAEIEKEKE ENEKKKQKKA bmy_20332T0/1-234 VVQSGGKNIE LAVMRRDQPL KILNPEEIEK YVAEIEKEKE ENEKKKQKKA 251 300 ENSP00000359910/1-248 S ENSTTRP00000010473/1-248 S ENSBTAP00000006760/1-248 S BACU011264/1-216 S bmy_20332T0/1-234 S