KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:20 2014 Check: 00 .. Name: ENSP00000360540/1-464 Len: 529 Check: 2578 Weight: 1.00 Name: ENSBTAP00000006763/1-463 Len: 529 Check: 8449 Weight: 1.00 Name: ENSTTRP00000007915/1-463 Len: 529 Check: 4307 Weight: 1.00 Name: bmy_08239T0/1-373 Len: 529 Check: 6585 Weight: 1.00 Name: BACU012464/1-473 Len: 529 Check: 518 Weight: 1.00 // 1 50 ENSP00000360540/1-464 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006763/1-463 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007915/1-463 ---------- ---------- ---------- ---------- ---------- bmy_08239T0/1-373 MATGILLADS TITRSMALNG QKANFSNEVK KTRALELAAA PPGREGGGRL BACU012464/1-473 -----MLKDA DL-------- ---------- ---------- ---------- 51 100 ENSP00000360540/1-464 ---------- -----MSSRS TKDLIKSKWG SKPSNSKSET TLEKLKGEIA ENSBTAP00000006763/1-463 ---------- -----MSSRN PKDLIKSKWG PKPSNSKSET ALEKFRGEIT ENSTTRP00000007915/1-463 ---------- -----MSSRS PKDLIKSKWG PKPSNSKSEA ALEKFRGEIA bmy_08239T0/1-373 LQRRGKEERR WTFSEMSSRS PKDLIKSKWG PKPSNSKSEA ALEKFRGEIA BACU012464/1-473 ---------- -TFSEMSSRS PKELIKSKWG PKPCNSKSEA ALEKFRGETA 101 150 ENSP00000360540/1-464 HLKTSVDEIT SGKGKLTDKE RHRLLEKIRV LEAEKEKNAY QLTEKDKEIQ ENSBTAP00000006763/1-463 ALKTSVDEIT SGKGKLIDKD RHKLLEKIRV LEAEREKNVY RLTEKDKEIQ ENSTTRP00000007915/1-463 ALKTSVDEMA SGKGKLNDKD RHRLLEKIRV LEAEREKNAY RLTEKDKEIQ bmy_08239T0/1-373 ALKTSVDEIA SGKGKLTDKD RHRLLEKIRV LEAEREKNAY RLTEKDKEIQ BACU012464/1-473 ALKTSVDEIA SGKGKLTDKD RHRLLEKIRV LEAEREKNAY RLTEKDKEIQ 151 200 ENSP00000360540/1-464 RLRDQLKARY STTTLLEQLE ETTREGERRE QVLKALSEEK DVLKQQLSAA ENSBTAP00000006763/1-463 RLRDQLKAKH SSTALLEQLE EKTKEVERRE QLLKSLSEET DVLKKQLSAT ENSTTRP00000007915/1-463 QLRDELKAKH STTALLEQLE EKTKEGERRE QLLKSLSEET DILKKHLSAT bmy_08239T0/1-373 RLRDELKAKH STTALLEQLE EKTKEGERRE QLLKSLSEET DVLKKQLSAT BACU012464/1-473 RLRDELKAKH STTALLEQLE EKTKEGERRE QLLKSLSEEA DVLKKQLSAT 201 250 ENSP00000360540/1-464 TSRIAELESK TNTLRLSQTV APNCFNSSIN NIHEMEIQLK DALEKNQQWL ENSBTAP00000006763/1-463 TARLAELEGK ANTLHLSQTV ATSCFNSSMS NIHEMEVQLK DALEKNQQWL ENSTTRP00000007915/1-463 TARLAEFEGK ADTLRLSQTV ATSCFNSSMS NIHEMEIQLK DALEKNQQWL bmy_08239T0/1-373 TARLAELEGK ADTLCLSQTV ATSCFSSSLS NIHEMEIQLK D--------- BACU012464/1-473 TARLAELEGK ADTLCLSQTV AASCFSSSLS N-HEMEIQLK DAMEKNQQWL 251 300 ENSP00000360540/1-464 VYDQQREVYV KGLLAKIFEL EKKTETAAHS LPQQTKKPES EGYLQEEKQK ENSBTAP00000006763/1-463 VYDQQREAYV KALLAKIFEL EQKLETAPQT LPQQTKKTES EGYLQEEKQK ENSTTRP00000007915/1-463 VYDEQREVYV KGLLAKIFEL EQKLETAVHA FPQETKKTES EGCLQEEKQK bmy_08239T0/1-373 ---------- ---------- ---------- ---------- ---------- BACU012464/1-473 VYDQQREVYV KGLLAKIFEL EQKLETDVHA LPQETKKTES EGYLQEEKQK 301 350 ENSP00000360540/1-464 CYNDLLASAK KDLEVERQTI TQLSFELSEF RRKYEETQKE VHNLNQLLYS ENSBTAP00000006763/1-463 YYNHLLENAK KDLEVERQTI TQLNFELSEF RRKYEETQKE VQDLNQLLCS ENSTTRP00000007915/1-463 YYNHLLANAK NDLEVERQTI TQLNFELSEF RRKYEETQKE VQDLNQLLCS bmy_08239T0/1-373 ---------- ---------- ---------- ---------- ---------- BACU012464/1-473 YYNHLLANAK NDLDVERQTI TQLNFELSEF RRKYEETQKE VQDLNQLLCS 351 400 ENSP00000360540/1-464 QRRADVQHLE DDRHKTEKIQ KLREENDIAR GKLEEEKKRS EELLSQVQFL ENSBTAP00000006763/1-463 QRKADVQHLE DDRHKTEKIQ RLKEENDLAR EKLEEEKKRS EELLSRVQFL ENSTTRP00000007915/1-463 QRKADVQHLE YDRHKTEKIQ RLKEENDLAR EKLEEEKKRS EELLSQVQFL bmy_08239T0/1-373 ---------- ---------- ---------- ---------- ------VQFL BACU012464/1-473 QRKAGVQHLE DDRHKTEKIQ RLKEENDLAR EKLEEEKKRS EELLSQVQFL 401 450 ENSP00000360540/1-464 YTSLLKQQEE QTRVALLEQQ MQACTLDFEN EKLDRQHVQH QLHVILKELR ENSBTAP00000006763/1-463 YTSLIKQQEE QTRVALLEQQ MQACTLDFEN EKLDRQNMQH QLHVILKELR ENSTTRP00000007915/1-463 YTTLLKQKEE QKRVALLEQQ MQACTVDFEN EKLDRQNMQH QLHVILKELR bmy_08239T0/1-373 YTTLLKQQEE QTRVALLEQQ MQACTLDFEN EKLDRQNMQH QLHVILKELR BACU012464/1-473 YTTLLKQQEE QTRVALLEQQ MQACTLDFEN EKLDRQNMQH QLHVILKELR 451 500 ENSP00000360540/1-464 KARNQITQLE SLKQLHEFAI TEPLVTFQGE TENREKVAAS PKSPTAALNE ENSBTAP00000006763/1-463 KARNQITQLE SLKQIREFAF TEPLVTFQKE TENRGKVAS- PKCPTAALNE ENSTTRP00000007915/1-463 KARNQITQLE SLKQLQEFAF TEPLVTLQGE TENRGKVAS- PKSPTAALNE bmy_08239T0/1-373 KARNQITQLE SLKQLREFAF TEPLVTCQGE TENRGKVAS- PKSPTAALNE BACU012464/1-473 KARNQITQLE SLKQLREFAF TEPLVTCQGE TENRGKVAL- PKSPTAALNE 501 550 ENSP00000360540/1-464 SLVECPKCNI QYPATEHRDL LVHVEYCSK ENSBTAP00000006763/1-463 SLVECPKCNI QYPATEHRDL LVHVEYCSK ENSTTRP00000007915/1-463 SLVECPKCNI QYPATEHRDL LVHVEYCSE bmy_08239T0/1-373 SLVECPKCNI QYPATEHRDL LVHVEYCSE BACU012464/1-473 SLVECPKCNI QYPATEHRDL LVHVEYCSE