KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:22 2014 Check: 00 .. Name: bmy_07405T0/1-501 Len: 538 Check: 9027 Weight: 1.00 Name: BACU011093/1-150 Len: 538 Check: 526 Weight: 1.00 Name: ENSBTAP00000006773/1-436 Len: 538 Check: 8441 Weight: 1.00 Name: ENSP00000355964/1-370 Len: 538 Check: 5913 Weight: 1.00 Name: ENSTTRP00000001912/1-370 Len: 538 Check: 1987 Weight: 1.00 // 1 50 bmy_07405T0/1-501 ---------- -----MTATP RPGTPAAAAA QHRVPGRRPP APPAPALHRP BACU011093/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006773/1-436 GSPAPAAVAR AGGRTTAAAP SLEGALGTAL PGRGPTPAAP TPPTPRTPRP ENSP00000355964/1-370 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001912/1-370 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_07405T0/1-501 -PPAPAEKDR TVSNVRMAVT LEEAPWLGWI LVKALMRFAF MVANNLVAIS BACU011093/1-150 ---------- ------MAVT LEEAPWLGWI LVKALMRFAF MVANNLVAIS ENSBTAP00000006773/1-436 APAAPPQQDR TDFDVRMAVT LEEAPWLGWI LVKALVRFAF MVANNLVAIP ENSP00000355964/1-370 ---------- ------MAIT LEEAPWLGWL LVKALMRFAF MVVNNLVAIP ENSTTRP00000001912/1-370 ---------- ------MAVT LEEAPWLGWI LVKALMRFAF MVANNLVAIS 101 150 bmy_07405T0/1-501 SYICYVIVLQ PLRLLDTLKL FVL------- ---------- ----TVMEWG BACU011093/1-150 SYICYVIVLQ PLRLLDSKRF WYIEGIMYKW LLGMVASWGW YAGYTVMEWG ENSBTAP00000006773/1-436 SYLCYIIVLL PLRLLDSKRY WYLEGMMYKW LLGMVASWGW YAGYTVMEWG ENSP00000355964/1-370 SYICYVIILQ PLRVLDSKRF WYIEGIMYKW LLGMVASWGW YAGYTVMEWG ENSTTRP00000001912/1-370 SYICYVIVLQ PLRLLDSKRF WYIEGIMYKW LLGMVASWGW YAGYTVMEWG 151 200 bmy_07405T0/1-501 EDIKAISKDE AVMLVNHQAT GDVCTLMMCL QDKGLVVAQM MWLMDHIFKY BACU011093/1-150 EDIEAVSKDE AVMLVNHQAT GDVCTLMMCL QDKGLCL--- ---------- ENSBTAP00000006773/1-436 EDIKTISEDE AVMLVNHQAT GDVCTLMMCL QDKGLVVAQM MWLMDHIFKY ENSP00000355964/1-370 EDIKAVSKDE AVMLVNHQAT GDVCTLMMCL QDKGLVVAQM MWLMDHIFKY ENSTTRP00000001912/1-370 EDIKAISKDE AVMLVNHQAT GDVCTLMMCL QDKGLVVAQM MWLMDHIFKY 201 250 bmy_07405T0/1-501 TNFGIVSLIH GDFFIRQGKS HRDQQLLLLK KHLENNYRSR DRKWIVLFPE BACU011093/1-150 ---------- ---------- -----LLIFE SQ-------- ---------- ENSBTAP00000006773/1-436 TNFGIVSLVH GDFFIRQGKS HRDQQLLLLK KHLENNYRSR DRKWIVLFPE ENSP00000355964/1-370 TNFGIVSLVH GDFFIRQGRS YRDQQLLLLK KHLENNYRSR DRKWIVLFPE ENSTTRP00000001912/1-370 TNFGIVSLIH GDFFIRQGKS HRDQQLLLLK KHLENNYRNR DRKWIVLFPE 251 300 bmy_07405T0/1-501 GGFLRKRRET SQAFAKKNNL PFLTHVTLPR IGATKIILNA LVARQENGSP BACU011093/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006773/1-436 GGFLRKRRET SQSFAKKNNL PFLTHVTLPR VGATKIILRA LVARQENGSP ENSP00000355964/1-370 GGFLRKRRET SQAFAKKNNL PFLTNVTLPR SGATKIILNA LVAQQKNGSP ENSTTRP00000001912/1-370 GGFLRKRRET SQAFAKKNNL PFLTHVTLPR IGATKIILNA LVARQENGSP 301 350 bmy_07405T0/1-501 AGGDAKELDK KSKGLQWIID TTIAYPKAEP IDIQTWILGY RKPVVTHVHY BACU011093/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006773/1-436 AGGDAKELDN KSKGLQWIID TTIAYPKAEP IDIQTWILGY RKPAVIHVHY ENSP00000355964/1-370 AGGDAKELDS KSKGLQWIID TTIAYPKAEP IDIQTWILGY RKPTVTHVHY ENSTTRP00000001912/1-370 AGGDAKELDS RSKGLQWIID TTIAYPKAEP IDIQTWILGY RKPVVTHVHY 351 400 bmy_07405T0/1-501 RIFPIKDIPL ETDNLADWLY QRFIEKEDLL SHFYETGSYF ISQCGKIKCD BACU011093/1-150 RV--LKTVSI NTPNF----- ---------- ---------- ---------- ENSBTAP00000006773/1-436 RIFPVKDVPL ETDDLSDWLY QRFIEKEDLL SHFYETGAFP PPKGHKEAVS ENSP00000355964/1-370 RIFPIKDVPL ETDDLTTWLY QRFVEKEDLL SHFYETGAFP PSKGHKEAVS ENSTTRP00000001912/1-370 RIFPIKDIPL ETDNLADWLY QRFIEKEDLL SHFYETGAFP PPKGHEEAVS 401 450 bmy_07405T0/1-501 TPVFHSYMKF SVKHALGGKA VSTGHILVLW VRKKKGKGVD FESQKRKKKM BACU011093/1-150 --V------- ---------- ----TLTPVW Q--------- ---------- ENSBTAP00000006773/1-436 REM------- ---------- ----TLSNMW I--------- ---------- ENSP00000355964/1-370 REM------- ---------- ----TLSNLW I--------- ---------- ENSTTRP00000001912/1-370 REM------- ---------- ----TLSNTW L--------- ---------- 451 500 bmy_07405T0/1-501 AFEMNTFXKI AEDLSTQLKG DLALHRSCPG VPAQVASGEC HTVQQSDDGS BACU011093/1-150 -R-------- ---------- ---------- ---------- ---------- ENSBTAP00000006773/1-436 -FLIQSFAFL SGYMWYNI-- -FQYFYHCLF ---------- ---------- ENSP00000355964/1-370 -FLIQSFAFL SGYMWYNI-- -IQYFYHCLF ---------- ---------- ENSTTRP00000001912/1-370 -FLIQSFAFL SGYMWYSI-- -FQYFYHCLF ---------- ---------- 501 550 bmy_07405T0/1-501 PGLDLVLSPP CHVPCNLAPP LSPERSEADA DTDADAVA BACU011093/1-150 ---------- ---------- ---------- -------- ENSBTAP00000006773/1-436 ---------- ---------- ---------- -------- ENSP00000355964/1-370 ---------- ---------- ---------- -------- ENSTTRP00000001912/1-370 ---------- ---------- ---------- --------