KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:27 2014 Check: 00 .. Name: ENSP00000347433/1-514 Len: 524 Check: 6117 Weight: 1.00 Name: ENSBTAP00000006789/1-495 Len: 524 Check: 9844 Weight: 1.00 Name: ENSTTRP00000009704/1-512 Len: 524 Check: 2979 Weight: 1.00 Name: bmy_18343T0/1-257 Len: 524 Check: 204 Weight: 1.00 Name: BACU017061/1-510 Len: 524 Check: 9765 Weight: 1.00 // 1 50 ENSP00000347433/1-514 MSWPRRLLLR Y-------LF PALLL--HGL GEGSALLHPD SRSHPRSLEK ENSBTAP00000006789/1-495 ---------- ---------- ---------L GEGSALLHPD SRTHPRSLEK ENSTTRP00000009704/1-512 MSCVRRLLLT S-------LF PALLL--HGL GEGSALLHPD SRSHPRSLEK bmy_18343T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU017061/1-510 MSPPRGQCLS WPHVSAAPLT PALHVSVSGL GEGSALLHPD SRSHPRSLEK 51 100 ENSP00000347433/1-514 SAWRAFKESQ CHHMLKHLHN GARITVQMPP TIEGHWVSTG CEVRSGPEFI ENSBTAP00000006789/1-495 SAWRAFKESQ CHHMLKHLHN GARITVQMPP AIEGHWVSTG CEVRSGPEFI ENSTTRP00000009704/1-512 SAWRAFKESQ CHHMLKHLHN GARITVQMPP AIEGHWVSTG CEVRSGPEFI bmy_18343T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU017061/1-510 SAWRAFKESQ CHHMLKHLHN GARITVQMPP AIEGHWVSTG CEVRSGPEFI 101 150 ENSP00000347433/1-514 TRSYRFYHNN TFKAYQFYYG SNRCTNPTYT LIIRGKIRLR QASWIIRGGT ENSBTAP00000006789/1-495 TRSYRFYHNN TFKAYQFYYG GNRCTSPTYT LVVRGKIRLR QASWIIRGGT ENSTTRP00000009704/1-512 TRSYRFYHNN TFKAYQFYYG GNRCTSPTYT LVVRGKIRLR QASWIIRGGT bmy_18343T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU017061/1-510 TRSYRFYHNN TFKAYQFYYG GNRCTSPIYT LVVRGKIRLR QASWIIRGGT 151 200 ENSP00000347433/1-514 EADYQLHNVQ VICHTEAVAE KLGQQVNRTC PGFLADGGPW VQDVAYDLWR ENSBTAP00000006789/1-495 EADYQLHRVQ VVCHSEAVAE RLGQLVNHTC PGFVPAGGAW VQDVPYDLWQ ENSTTRP00000009704/1-512 EADYQLHRVQ VVCHSEAVAE RLGQLVNRTC PGFMPAGGPW VQDVPYDLWR bmy_18343T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU017061/1-510 EADYQLHRVQ VVCHSEAVAE RLGQLVNRTC PGFVPARGPW VQDVPYDLKV 201 250 ENSP00000347433/1-514 EENGCECTKA VNFAMHELQL IRVEKQYLHH NLDHLVEELF LGDIHTDATQ ENSBTAP00000006789/1-495 EEGGRECTRA VNFAMHELQL VRVEKQHLPH SLDRLVEELF LGDVHTDTAQ ENSTTRP00000009704/1-512 EEGGRECTRA VNFAMHELQL VRVEKQYLQH NLDRLVEELF LGDIHTDASQ bmy_18343T0/1-257 ---------- ---------- ---------- ---------- ---------- BACU017061/1-510 QNSMNSVIPC VKLVIKE--E VIVNGRYLRK ---------- -ASWKRETLE 251 300 ENSP00000347433/1-514 RMFYRPSSYQ PPLQNAKNHD HACIACRIIY RSDEHHPPIL PPKADLTIGL ENSBTAP00000006789/1-495 RMFYRPSSYQ PPLQNAKNHD HACVACRIIH RSDEHRPPLL PPKADLTVGL ENSTTRP00000009704/1-512 RMFYRPSSYQ PPLQNAKNHD HACIACRIIH RSDEHRPPLL PPKADLTVGL bmy_18343T0/1-257 ---------- -------NHD HACIACRIIH RSDEHRPPLL PPKADLTVGL BACU017061/1-510 PVRYLGLNFC FSMV-VPNHD HACIACRIIH RSDEHRPPLL PPKADLTVGL 301 350 ENSP00000347433/1-514 HGEWVSQRCE VRPEVLFLTR HFIFHDNNNT WEGHYYHYSD PVCKHPTFSI ENSBTAP00000006789/1-495 HGEWVSQRCE VRPEVLFLTR HFIFHDNNHS WEGHYYHYSD PVCKHPTFTL ENSTTRP00000009704/1-512 HGEWVSQRCE VRPEVLFLTR HFIFHDNNHT WEGHYYHYSD PVCKHPTFTI bmy_18343T0/1-257 HGEWVSQRCE VRPEVLFLTR HFIFHDNNHT WEGHYYHYSD PVCKHPTFTI BACU017061/1-510 HGEWVSQRCE VRPEVLFLTR HFIFHDNNHT WEGHYYHYSD PVCKHPTFTI 351 400 ENSP00000347433/1-514 YARGRYSRGV LSSRVMGGTE FVFKVNHMKV TPMDAATASL LNVFNGNECG ENSBTAP00000006789/1-495 YARGRYSRGV HSARVLGGTE FVFKVNHMKV TPMDAATASL LNVFSGNECG ENSTTRP00000009704/1-512 YAKGRYSRGV HSARVMGGTE FVFKVNHMKV TPMDAATASL LNVFNGNECG bmy_18343T0/1-257 YAKGRYSRGV HSARVMGGTE FVFKVNHMKV TPMDAATASL LNVFNGNECG BACU017061/1-510 YAKGRYSRGV HSARVMGGTE FVFKVNHMKV TPMDAATASL LNVFNGNECG 401 450 ENSP00000347433/1-514 AEGSWQVGIQ QDVTHTNGCV ALGIKLPHTE YEIFKMEQDA RGRYLLFNGQ ENSBTAP00000006789/1-495 AEGSWQVGVQ QDVTHTNGCV ALGIRLPHTE YEIFKMERDT RGRYLLFNGQ ENSTTRP00000009704/1-512 AEGSWQVGVQ QDVTHTNGCV ALGIKLPHTE YEIFKMEQDA RGRYLLFNGQ bmy_18343T0/1-257 AEGSWQVGVQ QDVTHTNGCV ALGIKLPHTE YEIFKMEQDT RGRYLLFNGQ BACU017061/1-510 AEGSWQVGVQ QDVTHTNGCV ALGIKLPHTE YEIFKMEQDA RGRYLLFNGQ 451 500 ENSP00000347433/1-514 RPSDGSSPDR PEKRATSYQM PLVQCASSSP RAEDLAEDSG SS-LYGRAPG ENSBTAP00000006789/1-495 RPSDGSSPDR PEKRATSYQM PLVQCASSAP RPEDFSEDPG GHGHRSRAPG ENSTTRP00000009704/1-512 RPSDGSSPDR PEKRATSYQM PLVQCASSAP RAEDFSEDGS ---ISPRAPG bmy_18343T0/1-257 RPSDGSSPDR PEKRATSYQM PLVQCASSAP RAEDFSEDSG GHQHRSRAPG BACU017061/1-510 RPSDGSSPDR PEKRATSYQM PLVQCASSAP RAEDFSEDSG GHQHRSRAPG 501 550 ENSP00000347433/1-514 RHTWSLLLAA LACLVPLLHW NIRR ENSBTAP00000006789/1-495 SSPGPLLLAG LTGLWTLSPW LGLG ENSTTRP00000009704/1-512 SGPCPLLLAG LAGLWTLQPW HSLG bmy_18343T0/1-257 RGPCLLLLAG LAGLWTLQPW HSLG BACU017061/1-510 RGPCPLLLAG LAGLWTLQPW HSLG