KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:30:28 2014 Check: 00 ..
Name: ENSP00000377769/1-428 Len: 432 Check: 8982 Weight: 1.00
Name: ENSBTAP00000006796/1-431 Len: 432 Check: 3837 Weight: 1.00
Name: bmy_09635T0/1-303 Len: 432 Check: 893 Weight: 1.00
Name: ENSTTRP00000006777/1-410 Len: 432 Check: 5485 Weight: 1.00
//
1 50
ENSP00000377769/1-428 MFSLMASCCG WFKRWREPVR KVTLLMVGLD NAGKTATAKG IQGEYPEDVA
ENSBTAP00000006796/1-431 MFSLMANCCN WFKRWREPVR KVTLVMVGLD NAGKTATAKG IQGEYPEDVA
bmy_09635T0/1-303 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006777/1-410 ---------- ---------- KVTLVMVGLD NAGKTATAKG IQGEYPEDVA
51 100
ENSP00000377769/1-428 PTVGFSKINL RQGKFEVTIF DLGGGIRIRG IWKNYYAESY GVIFVVDSSD
ENSBTAP00000006796/1-431 PTVGFSKIDL RQGKFEVTIF DLGGGKRIRG IWKNYYAESY GVIFVVDSSD
bmy_09635T0/1-303 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000006777/1-410 PTVGFSKIDL RQGKFEVTIF DLGGGKRIRG IWKNYYAESY GVIFVVDSSD
101 150
ENSP00000377769/1-428 EERMEETKEA MSEMLRHPRI SGKPILVLAN KQDKEGALGE ADVIECLSLE
ENSBTAP00000006796/1-431 EERMEETKET MSEVLRHPRI SGKPILVLAN KQDKEGALGE ADVIECLSLE
bmy_09635T0/1-303 ---------- ---------- -------LAN KQDKEGALGE ADVIECLSLE
ENSTTRP00000006777/1-410 EERMEETKET MSEVIRHPRI SGKPVLVLAN KQDKEGALGE ADVIECLSLE
151 200
ENSP00000377769/1-428 KLVNEHKCLC QIEPCSAISG YGKKIDKSIK KGLYWLLHVI ARDFDALNER
ENSBTAP00000006796/1-431 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER
bmy_09635T0/1-303 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER
ENSTTRP00000006777/1-410 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER
201 250
ENSP00000377769/1-428 IQKETTEQRA LEEQEKQERA ERVRKLREE- -RKQNEQEQA ELDGTSGLAE
ENSBTAP00000006796/1-431 IQKDTAEQRA LEEQEKRERA ERVRKLREER YREQREQEQA ELHGTSGMAE
bmy_09635T0/1-303 IQKDTTEQRA LEEQENRERA ERVRKLREE- -REQREREQA ELDGTSGLAE
ENSTTRP00000006777/1-410 IQKDTAEQRA LEEQENRERA ERVRKLREE- -REQREREQA ELDGTSGLAE
251 300
ENSP00000377769/1-428 LDPEP--TNP FQPIASVIIE NEGKLEREKK NQKMEKDSDG CHLKHKMEHE
ENSBTAP00000006796/1-431 LDPEPVIVNP FQPIASVIIE NEKKLEREKK RQNTE-DSDG CPLKHKMEHE
bmy_09635T0/1-303 LDPEPIIVNP FQPIASVIIE NEKKLEREKK RQNVEEDSDG CPLKHKMERE
ENSTTRP00000006777/1-410 LDPEPIIVNP FQPITSVIIE NEKKLEREKK RQNMEEDSDG CPLKHKMDHE
301 350
ENSP00000377769/1-428 QIETQGQVNH NGQKNNEFGL VENYKEALTQ QLKNEDETDR PSLESANGKK
ENSBTAP00000006796/1-431 QIETQSQISD SSQKNSEFGV VENYKEALTQ QLENEDETDW RSSESDNSKK
bmy_09635T0/1-303 QIETQSQISD SSQKNNEFGI VENYKEALTQ QLENEDETDQ QSSESDNSKK
ENSTTRP00000006777/1-410 QIETQSQISD SSQKNNGFGI VENYKEALTQ QLENEDETDQ QSSESDNSKK
351 400
ENSP00000377769/1-428 KTKKLRMKRN HRVEPLNIDD CAPESPTPPP PPPPVGWGTP KVTRLPKLEP
ENSBTAP00000006796/1-431 KAKKLRMKRS HRVEPVNTDD SVPKSPTPPP PPPPVGWGTP KVTRLPKLEP
bmy_09635T0/1-303 KTKKLRMKRS HRVEPVNTDD SAPKSPTPPP PPPPVGWGTP KVTRLPKLEP
ENSTTRP00000006777/1-410 KTKKLRMKRS HRVEPVNTDD SVPKSPTPPP PPPPVGWGTP KVTRLPKLEP
401 450
ENSP00000377769/1-428 LGETHHNDFY RKPLPPLAVP QRPNSDAHDV IS
ENSBTAP00000006796/1-431 LGETRHNDFY GKPLPPVAVR QRPNSDAHDV IS
bmy_09635T0/1-303 LGETRHNDFY GKPLPPLAVR QRPNSDSHDV IS
ENSTTRP00000006777/1-410 LGETRHNDFY GKPLPPLAVR PRPNSDSHDV IS