KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:30:28 2014 Check: 00 .. Name: ENSP00000377769/1-428 Len: 432 Check: 8982 Weight: 1.00 Name: ENSBTAP00000006796/1-431 Len: 432 Check: 3837 Weight: 1.00 Name: bmy_09635T0/1-303 Len: 432 Check: 893 Weight: 1.00 Name: ENSTTRP00000006777/1-410 Len: 432 Check: 5485 Weight: 1.00 // 1 50 ENSP00000377769/1-428 MFSLMASCCG WFKRWREPVR KVTLLMVGLD NAGKTATAKG IQGEYPEDVA ENSBTAP00000006796/1-431 MFSLMANCCN WFKRWREPVR KVTLVMVGLD NAGKTATAKG IQGEYPEDVA bmy_09635T0/1-303 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006777/1-410 ---------- ---------- KVTLVMVGLD NAGKTATAKG IQGEYPEDVA 51 100 ENSP00000377769/1-428 PTVGFSKINL RQGKFEVTIF DLGGGIRIRG IWKNYYAESY GVIFVVDSSD ENSBTAP00000006796/1-431 PTVGFSKIDL RQGKFEVTIF DLGGGKRIRG IWKNYYAESY GVIFVVDSSD bmy_09635T0/1-303 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006777/1-410 PTVGFSKIDL RQGKFEVTIF DLGGGKRIRG IWKNYYAESY GVIFVVDSSD 101 150 ENSP00000377769/1-428 EERMEETKEA MSEMLRHPRI SGKPILVLAN KQDKEGALGE ADVIECLSLE ENSBTAP00000006796/1-431 EERMEETKET MSEVLRHPRI SGKPILVLAN KQDKEGALGE ADVIECLSLE bmy_09635T0/1-303 ---------- ---------- -------LAN KQDKEGALGE ADVIECLSLE ENSTTRP00000006777/1-410 EERMEETKET MSEVIRHPRI SGKPVLVLAN KQDKEGALGE ADVIECLSLE 151 200 ENSP00000377769/1-428 KLVNEHKCLC QIEPCSAISG YGKKIDKSIK KGLYWLLHVI ARDFDALNER ENSBTAP00000006796/1-431 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER bmy_09635T0/1-303 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER ENSTTRP00000006777/1-410 KLVNEHKCLC QIEPCSAVLG YGKKIDKSIK KGLYWLLHII ARDFDALNER 201 250 ENSP00000377769/1-428 IQKETTEQRA LEEQEKQERA ERVRKLREE- -RKQNEQEQA ELDGTSGLAE ENSBTAP00000006796/1-431 IQKDTAEQRA LEEQEKRERA ERVRKLREER YREQREQEQA ELHGTSGMAE bmy_09635T0/1-303 IQKDTTEQRA LEEQENRERA ERVRKLREE- -REQREREQA ELDGTSGLAE ENSTTRP00000006777/1-410 IQKDTAEQRA LEEQENRERA ERVRKLREE- -REQREREQA ELDGTSGLAE 251 300 ENSP00000377769/1-428 LDPEP--TNP FQPIASVIIE NEGKLEREKK NQKMEKDSDG CHLKHKMEHE ENSBTAP00000006796/1-431 LDPEPVIVNP FQPIASVIIE NEKKLEREKK RQNTE-DSDG CPLKHKMEHE bmy_09635T0/1-303 LDPEPIIVNP FQPIASVIIE NEKKLEREKK RQNVEEDSDG CPLKHKMERE ENSTTRP00000006777/1-410 LDPEPIIVNP FQPITSVIIE NEKKLEREKK RQNMEEDSDG CPLKHKMDHE 301 350 ENSP00000377769/1-428 QIETQGQVNH NGQKNNEFGL VENYKEALTQ QLKNEDETDR PSLESANGKK ENSBTAP00000006796/1-431 QIETQSQISD SSQKNSEFGV VENYKEALTQ QLENEDETDW RSSESDNSKK bmy_09635T0/1-303 QIETQSQISD SSQKNNEFGI VENYKEALTQ QLENEDETDQ QSSESDNSKK ENSTTRP00000006777/1-410 QIETQSQISD SSQKNNGFGI VENYKEALTQ QLENEDETDQ QSSESDNSKK 351 400 ENSP00000377769/1-428 KTKKLRMKRN HRVEPLNIDD CAPESPTPPP PPPPVGWGTP KVTRLPKLEP ENSBTAP00000006796/1-431 KAKKLRMKRS HRVEPVNTDD SVPKSPTPPP PPPPVGWGTP KVTRLPKLEP bmy_09635T0/1-303 KTKKLRMKRS HRVEPVNTDD SAPKSPTPPP PPPPVGWGTP KVTRLPKLEP ENSTTRP00000006777/1-410 KTKKLRMKRS HRVEPVNTDD SVPKSPTPPP PPPPVGWGTP KVTRLPKLEP 401 450 ENSP00000377769/1-428 LGETHHNDFY RKPLPPLAVP QRPNSDAHDV IS ENSBTAP00000006796/1-431 LGETRHNDFY GKPLPPVAVR QRPNSDAHDV IS bmy_09635T0/1-303 LGETRHNDFY GKPLPPLAVR QRPNSDSHDV IS ENSTTRP00000006777/1-410 LGETRHNDFY GKPLPPLAVR PRPNSDSHDV IS