KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:29 2014 Check: 00 .. Name: BACU017062/1-326 Len: 400 Check: 9420 Weight: 1.00 Name: ENSP00000324628/1-312 Len: 400 Check: 5968 Weight: 1.00 Name: ENSBTAP00000006800/1-312 Len: 400 Check: 4442 Weight: 1.00 Name: ENSTTRP00000009722/1-292 Len: 400 Check: 9145 Weight: 1.00 Name: bmy_18342T0/1-397 Len: 400 Check: 8681 Weight: 1.00 // 1 50 BACU017062/1-326 MEALTPWYFA HSFTGALCLI IFPDHREPSQ SHKIKVLRQY VPQLLKRGSG ENSP00000324628/1-312 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006800/1-312 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009722/1-292 ---------- ---------- ---------- ---------- ---------- bmy_18342T0/1-397 ---VLCRFAA LGLSPAGPGG AAAAQSRPPP RRSHAHSAGS RPPRQGRAAE 51 100 BACU017062/1-326 TEASRLLQGV CLFS-----L KTGFLKWKPD YDSAASEYGK AVDALTGPCR ENSP00000324628/1-312 MAAQKINEGL EHLAKAEKYL KTGFLKWKPD YDSAASEYGK AAVAFKNAKQ ENSBTAP00000006800/1-312 MAAQKINEGL EHLAKAEKYL KTGFLKWKPD YDSAASEYGK AAVAFKNAKQ ENSTTRP00000009722/1-292 ---------- ---------L KTGFLKWKPD YDSAASEYGK AAVAFKNAKQ bmy_18342T0/1-397 MAAQKINEGL EHLAKAEKYL KTGFLKWKPD YDSAASEYGK AAVAFKNAKQ 101 150 BACU017062/1-326 IV-----C-- ---------- ---------- ---------- ---------- ENSP00000324628/1-312 FEQAKDACLR EAVAHENNRA LFHAAKAYEQ AGMM------ ---------- ENSBTAP00000006800/1-312 FEQAKDACLK EAVAHENNRA LFHAAKAYEQ AGMM------ ---------- ENSTTRP00000009722/1-292 FEQAKDACLR EAVAHENNRA -FSSPSXYEQ AGMM------ ---------- bmy_18342T0/1-397 FEQAKDACLR EAVAHENNRA LFHAAKAYEQ AGMMLKQAIL GNDTQPLGCQ 151 200 BACU017062/1-326 ---------- ---------- --LKEMQKLP EAVQLIEKAS MMYLENGTPD ENSP00000324628/1-312 ---------- ---------- --LKEMQKLP EAVQLIEKAS MMYLENGTPD ENSBTAP00000006800/1-312 ---------- ---------- --LKEMQKLP EAVQLIEKAS MMYLENGTPD ENSTTRP00000009722/1-292 ---------- ---------- --LKEMQKLP EAVQLIEKAS MMYLENGTPD bmy_18342T0/1-397 FAAFGTGLVY IDALTGPCRI VCLKEMQKLP EAVQLIEKAS MMYLENGTPD 201 250 BACU017062/1-326 TAAMALERAG KLIENVDPEK AVQLYQQTAN VFENEERLRQ AVELLGKASR ENSP00000324628/1-312 TAAMALERAG KLIENVDPEK AVQLYQQTAN VFENEERLRQ AVELLGKASR ENSBTAP00000006800/1-312 TAAMALERAG KLIENVDPEK AVQLYQQTAN VFENEERLRQ AVELLGKASR ENSTTRP00000009722/1-292 TAAMALERAG KLIENVDPEK AVQLYQQTAN VFENEERLRQ AVELLGKASR bmy_18342T0/1-397 TAAMALERAG KLIENVDPEK AVQLYQQTAN VFENEERLRQ AVELLGKASR 251 300 BACU017062/1-326 LLVRGRRFDE AALSIQKEKN IYKEIENYPT CYKKTIAQVL VHLHRNDYVA ENSP00000324628/1-312 LLVRGRRFDE AALSIQKEKN IYKEIENYPT CYKKTIAQVL VHLHRNDYVA ENSBTAP00000006800/1-312 LLVRGRRFDE AAISIQKEKN IYKEIENYPT CYKKTIAQVL VHLHRNDYVA ENSTTRP00000009722/1-292 LLVRGRRFDE AALSIQKEKN IYKEIENYPT CYKKTIAQVL VHLHRNDYVA bmy_18342T0/1-397 LLVRGRRFDE AALSIQKEKN IYKEIENYPT CYKKTIAQVL VHLHRNDYVA 301 350 BACU017062/1-326 AERCVRESYS IPGFNGSEDC TALEQLLEGY DQQDQDQVAE VCNSPLFKYM ENSP00000324628/1-312 AERCVRESYS IPGFNGSEDC AALEQLLEGY DQQDQDQVSD VCNSPLFKYM ENSBTAP00000006800/1-312 AERCVRESYS IPGFNGSEDC AALEQLLEGY DQQDQDQVAE VCNSPLFKYM ENSTTRP00000009722/1-292 AERCVRESYS IPGFNGSEDC TALEQLLEGY DQQDQDQVAE VCNSPLFKYM bmy_18342T0/1-397 AERCVRESYS IPGFNGSEDC TALEQLLEGY DQQDQDQVAE VCNSPLFKYM 351 400 BACU017062/1-326 DNDYAKLGLS LLVPGGGVKK KAGAPPQAAP EGHAAPAAED EEDEYAGGLC ENSP00000324628/1-312 DNDYAKLGLS LVVPGGGIKK KSPATPQAKP DGVTATAADE EEDEYSGGLC ENSBTAP00000006800/1-312 DNDYAKLGLS LVVPGGGVKK KAAAPPQAKP EGTAAPAAEE EEDEYAGGLC ENSTTRP00000009722/1-292 DNDYAKLGLS LLVPGGGVKK KAAAPPQATP KGHAAPAAED EEDEYAGGLC bmy_18342T0/1-397 DNDYAKLGLS LLVPGGGVKK KAAAPPQAAP EGHTAPAAED EEDEYAGGLC