KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:31 2014 Check: 00 .. Name: bmy_08289T0/1-143 Len: 251 Check: 5497 Weight: 1.00 Name: ENSBTAP00000006821/1-241 Len: 251 Check: 4504 Weight: 1.00 Name: ENSP00000445920/1-250 Len: 251 Check: 1151 Weight: 1.00 Name: BACU008381/1-241 Len: 251 Check: 298 Weight: 1.00 Name: ENSTTRP00000010163/1-243 Len: 251 Check: 1521 Weight: 1.00 // 1 50 bmy_08289T0/1-143 MAVX------ GLGGRLGLRG CLGARKLLCP RFQSRGPQGV EDGDRPQPSS ENSBTAP00000006821/1-241 MAVW------ GPGGRLGLRG CLGARKLLCP RFQSRGPQGV EDGDRPQPSS ENSP00000445920/1-250 MAVCGLGSRL GLGSRLGLRG CFGAARLLYP RFQSRGPQGV EDGDRPQPSS BACU008381/1-241 MAVW------ GLGGRLGLRG FLCARKLLCP RFQSRGPQGV EDGDRPQPSS ENSTTRP00000010163/1-243 MAVW------ GLGGRLGLRG CLGARKLLCP RFQSRGPQGV EDGDR--PSS 51 100 bmy_08289T0/1-143 KTPKLPKIYT KTGDK--DPV LPAGRRL--- ----CPGNTA LLSQ------ ENSBTAP00000006821/1-241 KTPKVPKIYT KTGDKGFSST FTGERRSKDD QVFEAVGTTD ELSSAIGFVM ENSP00000445920/1-250 KTPRIPKIYT KTGDKGFSST FTGERRPKDD QVFEAVGTTD ELSSAIGFAL BACU008381/1-241 KTPKLPKIYT KTGDKGFSST FTGERRPKDD QVFEAVGTTD ELSSAIGFAM ENSTTRP00000010163/1-243 KTPKLPKIYT KTGDKGFSST FTGERRPKDD QVFEAVGTTD ELSSAIGFAM 101 150 bmy_08289T0/1-143 ---------- ---------- ----GSSLKT RHVRGR-AHL GAGA------ ENSBTAP00000006821/1-241 ELIAEKGHPF VEELQKLQSS RPDWSTIFAT PLTVARQPPL SMGSSRAGPI ENSP00000445920/1-250 ELVTEKGHTF AEELQKIQCT LQDVGSALAT PCSSAREAHL KYTTFKAGPI BACU008381/1-241 ELIAEKGHPF VEELQKIQCS LQDVGSALAT PRSSAREAHL RHATFEAGPI ENSTTRP00000010163/1-243 ELIAEKGHPF VEELQKIQCS LQDVGSALAT PRSSAREAHL KHATFEAGPI 151 200 bmy_08289T0/1-143 ------VDR- -QILQPAA-- --PAHG---- -FHPASNTC- ---------- ENSBTAP00000006821/1-241 LELEQWIDKY SRQLPPLTAF ILPSGGKSSS ALHFCRAVCR RAERRVVPLV ENSP00000445920/1-250 LELEQWIDKY TSQLPPLTAF ILPSGGKISS ALHFCRAVCR RAERRVVPLV BACU008381/1-241 SELEQWIDRY SSQLPPLTAF ILPSGGKSSA ALHFCRAVCR RAERRVVPLV ENSTTRP00000010163/1-243 LELEQWIDRY SSQLPPLTAF ILPSGGKSSS ALHFCRAVCR RAERRVVPLV 201 250 bmy_08289T0/1-143 ---------- --------FL LSVRRQEQLR TAF------- --LSGRVPPS ENSBTAP00000006821/1-241 QTGETDANVV KFLNRLSDYL FTLARYTAMK EGNPEKIYKK NDLSDRT--- ENSP00000445920/1-250 QMGETDANVA KFLNRLSDYL FTLARYAAMK EGNQEKIYMK NDPSAESEGL BACU008381/1-241 QSGETDANVA KFLNRLSDYL FTLARYTAMK EGNPEKIYKK NDLSDRV--- ENSTTRP00000010163/1-243 QSGETDANVA KFLNRLSDYL FTLARYTAMK EGNPEKIYKK NDLSAMPEAL 251 300 bmy_08289T0/1-143 - ENSBTAP00000006821/1-241 - ENSP00000445920/1-250 - BACU008381/1-241 - ENSTTRP00000010163/1-243 G