KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:31 2014 Check: 00 .. Name: ENSTTRP00000013637/1-139 Len: 247 Check: 8899 Weight: 1.00 Name: bmy_05378T0/1-247 Len: 247 Check: 2678 Weight: 1.00 Name: BACU020205/1-153 Len: 247 Check: 2980 Weight: 1.00 Name: ENSP00000298546/1-168 Len: 247 Check: 2576 Weight: 1.00 Name: ENSBTAP00000006841/1-223 Len: 247 Check: 9425 Weight: 1.00 // 1 50 ENSTTRP00000013637/1-139 --NEVKESLR SVEQKYQLFQ QQQFTFIAAL EHCRENASDK IRPISSIGQ- bmy_05378T0/1-247 MMNEVKESLR SVEQKYRLFQ QQQFTFIAAL EHCRENAHDK IRPVSSIGQV BACU020205/1-153 --NEVKESLR SVEQKYRLFQ QQQFTFIAAL EHCRENAHDK IRPVSSIG-- ENSP00000298546/1-168 -MNEVKESLR SIEQKYKLFQ QQQLTFTAAL EHCRENAHDK IRPISSIGQV ENSBTAP00000006841/1-223 -MNEVKESLR SVEQKYKIFQ QQQFTFIGAL EHCRENAHDK IRPISSIGQV 51 100 ENSTTRP00000013637/1-139 ---------- ---------- ---------- ---------- ---------- bmy_05378T0/1-247 QSYTEHHCGN STDRRVLLMF LDICAELGKL CQHFEALHSG TPVTNDLLEK BACU020205/1-153 ---------- ---------- ---------- ---------- ---------- ENSP00000298546/1-168 QSYMEHYCNS STDRRVLLMF LDICSELNKL CQHFEAVHSG TPVTNNLLEK ENSBTAP00000006841/1-223 QSYMEHHCSN STDRRILLMF LDICSELSKL CQHFEALHAG TPVTNNLLEK 101 150 ENSTTRP00000013637/1-139 ---------- -------CPP DMANYLSCHE ARNHCGGVVS LIPIVLDMMK bmy_05378T0/1-247 CKTLVSQSND LSSLRAKYPH DMVNHLSCHE ARNHYGGVVS LIPIVLDLMK BACU020205/1-153 ---------- -------YPH DMVNHLSCHE ARNHYGGVVS LIPIVLDLMK ENSP00000298546/1-168 CKTLVSQSND LSSLRAKYPH DVVNHLSCDE ARNHYGGVVS LIPLILDLMK ENSBTAP00000006841/1-223 CKTLVSQSND LSSLRAKYPH DVVNHLSCDE ARNHYGGVVS LIPIILDLMK 151 200 ENSTTRP00000013637/1-139 EWVAHSEKLP RKALQHVSE- ---------- PQATGTQPRL RKNK--QPTQ bmy_05378T0/1-247 EWVAHSEKLP RKALQHVSEP QAATRAAARA PQATGTQPRL RKDKCGQPTQ BACU020205/1-153 EWVAHSEKLP RKALQHVSEP QAATRAAACA PQATGTQPRL RKDKCGQPTQ ENSP00000298546/1-168 EWIAHSEKLP RKVLQH---- ---------- ---------- ---------- ENSBTAP00000006841/1-223 EWVAHSEKLP RKALQQVSEP QAATRATAHA PQASGTQPQL RKQNCGQLIQ 201 250 ENSTTRP00000013637/1-139 DSLKPIG-AK QCSKPP-RPA GGKL------ ---------- ------- bmy_05378T0/1-247 DSLKPRGKNK ECSKPPWRPP GGKLTQPVTC LIPIPSCPIP SRGALCY BACU020205/1-153 DSLKPRGKNK ECSKPPWRPP GGKL------ ---------- ------- ENSP00000298546/1-168 ---------- ---------- -GTT------ ---------- ------- ENSBTAP00000006841/1-223 NIPKPGGKDQ GSSKPPWRPP GGKL------ ---------- -------