KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:33 2014 Check: 00 .. Name: ENSP00000227348/1-393 Len: 393 Check: 8017 Weight: 1.00 Name: ENSTTRP00000005406/1-391 Len: 393 Check: 7795 Weight: 1.00 Name: ENSBTAP00000006846/1-390 Len: 393 Check: 6049 Weight: 1.00 Name: bmy_10904T0/1-305 Len: 393 Check: 8180 Weight: 1.00 Name: BACU017366/1-389 Len: 393 Check: 2764 Weight: 1.00 // 1 50 ENSP00000227348/1-393 MWWRVLSLLA WFPLQEASLT NHTETITVEE GQTLTLKCVT SLRKNSSLQW ENSTTRP00000005406/1-391 MWWRLCSLLA WFPLQEAFQT NHMETVTVEE GQTLTLKCVI SQAETTSLQW ENSBTAP00000006846/1-390 MWWRVCSLLA WFPLQEAFRT NHMETVPIEE GQTLTLNCTV SQ-ETTSLQW bmy_10904T0/1-305 ---------- ------AFRT NHTETVTVEE GQTLTLKCVI SQAETTSLQW BACU017366/1-389 -MWASC--VD NHFTKEAFRT SHTETVTVEE GQTLTLKCVI SQAETTSLQW 51 100 ENSP00000227348/1-393 LTPSGFTIFL NEYPALKNSK YQLLHHSANQ LSITVPNVTL QDEGVYKCLH ENSTTRP00000005406/1-391 LAPSGFTIFF SEHSGLKNSK YQLLHYSSNQ LSISVLNVTQ QDEGVYKCLH ENSBTAP00000006846/1-390 LAPSGFTIFF NEQPALKSSK YQLLHHSSDQ LSISVLNVTQ HDEGVYKCLH bmy_10904T0/1-305 LAPSGFTIFF SEHPALKNSK YQLLHYSSNQ LAIRVLNVTQ QDEGVYKCLH BACU017366/1-389 LAPSGFTIFF GEHPALKNSK YQLLHYSSNQ LAIRVLNVTQ QDEGVYKCLH 101 150 ENSP00000227348/1-393 YSDSVSTKEV KVIVLATPFK PILEASVIRK QNGEEHVVLM CSTMRSKPPP ENSTTRP00000005406/1-391 YGNSVRTKEV KVIVLATPVK PTLEVAV-RM QNGE-HVLLK CSTVRSKPPP ENSBTAP00000006846/1-390 YGKSVRTKEV KVIVLATPVT PTLQVSVIKT HNGEEHVILK CSTVRSKPPP bmy_10904T0/1-305 YGTSVRTKEV KVIVLATPVT PTLEVSV-RM QNGEEHVILK CSTVRSRPPP BACU017366/1-389 YSTSVRTKEV KVIVLATPVT PTLEVSV-RM QNGEEHVILQ CSTVRSKPPP 151 200 ENSP00000227348/1-393 QITWLLGNSM EVSGGTLHEF ETDGKKCNTT STLIIHTYGK NSTVDCIIRH ENSTTRP00000005406/1-391 RITWLLGDDM EIQGETHHEY ETDGKKCNST STLRVHTYGK NSTASCIVRH ENSBTAP00000006846/1-390 RITWLLGNGM ELYGEIHHEY ETDGKKCNST STLTVHAYGK NSTASCIIRH bmy_10904T0/1-305 RITWLLGDDM ELQGETHHEY ETDGKKCNST STLRVHTYGQ NSTASCIIRH BACU017366/1-389 RITWLLGDDM EIQGETHHEY ETDGKKCNST STLRVHTYGQ NSTASCIIRH 201 250 ENSP00000227348/1-393 RGLQGRKLVA PFRFEDLVTD EETASDALER NSLSSQDPQQ PTSTVSVTED ENSTTRP00000005406/1-391 KGLQGRKLVA PFRFEDLXXX XXXXXXXXXX XXXXXXXXXX XXXXXAVMED ENSBTAP00000006846/1-390 RGLQGRKLVA PFRFEDLVTD QETTSAALET SSLSSQDPQQ PNSTV--MED bmy_10904T0/1-305 KGLQGRKLVA PFRFEDLVTD QETASAALET SSPSSQDPQQ STS------- BACU017366/1-389 KGLQGRKLVA PFRFEDLVTD QETASAALET SSPSSQDPQQ STSTVAVMED 251 300 ENSP00000227348/1-393 SSTSEIDKEE KEQTTQDPDL TTEANPQYLG LARKKSGILL LTLVSFLIFI ENSTTRP00000005406/1-391 SSTSEIDKEE EEQTTQVSHL ATEANRQFVG LTRKKSGILL LSLVSFLIFI ENSBTAP00000006846/1-390 SSTSEIDKEE EEQTTQVSHL ATEANRLYGG LTKKNSGVLL LTLVSFLIFI bmy_10904T0/1-305 ---------- ---------- -TEANRQFVG LTRKKSGILL LTLVSFLIFI BACU017366/1-389 SSTSEIDKEE EEQTTQVSHL ATEANRQFAG LTRKKSGILL LTLVSFLIFI 301 350 ENSP00000227348/1-393 LFIIVQLFIM KLRKAHVIWK KENEVSEHTL ESYRSRSNNE ETSSEEKNGQ ENSTTRP00000005406/1-391 LFIIVQLFIM KIRKAHVIWK KENEISEHTL ESYRSRSNNE ETSSQENNSQ ENSBTAP00000006846/1-390 LFIIVQLFIM KLRKAHVIWK KESEISEHTL ESYRSRSNNE ETSSQERNGQ bmy_10904T0/1-305 LFIIVQLFIM KLRKAHVIWK KENEISEHTL ESYRSRSNNE ETSSQEKNSQ BACU017366/1-389 LFIIVQLFIM KLRKAHVIWK KESEISEHTL ESYRSRSNNE ETSSQEKNSQ 351 400 ENSP00000227348/1-393 SSHPMRCMNY ITKLYSEAKT KRKENVQHSK LEEKHIQVPE SIV ENSTTRP00000005406/1-391 TSRSKSCMNY ITQLYSEAKT KTKEKAQPSK FKGELTHIPE SIV ENSBTAP00000006846/1-390 TSRSRGCINY ITQLYSEAKT KTKEKAQPSK LKGELTHIPE SIV bmy_10904T0/1-305 ---------- ---------- ---------- ---------- --- BACU017366/1-389 TSRSKSCMNY ITQLYSEAKT KTKEKAQPSK LKGALTHIPE SIV