KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:35 2014 Check: 00 .. Name: ENSP00000332151/1-958 Len: 1015 Check: 3653 Weight: 1.00 Name: ENSBTAP00000006855/1-959 Len: 1015 Check: 7602 Weight: 1.00 Name: ENSTTRP00000015686/1-960 Len: 1015 Check: 2126 Weight: 1.00 Name: bmy_06852T0/1-990 Len: 1015 Check: 822 Weight: 1.00 Name: BACU014237/1-959 Len: 1015 Check: 8196 Weight: 1.00 // 1 50 ENSP00000332151/1-958 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006855/1-959 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015686/1-960 ---------- ---------- ---------- ---------- ---------- bmy_06852T0/1-990 MQLLFLLTDA IQQKRQITAE FPSICFDSLG VFHKHDLGSF EDGLAALEIW BACU014237/1-959 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332151/1-958 -----MRTHT RGAPSVFFIY LLCFVSAYIT DENPEVMIPF TNANYDSHPM ENSBTAP00000006855/1-959 -----MRTHT RGAPSVFFIC LFCFVSACVT DENPEVMIPF TNANYDSHPM ENSTTRP00000015686/1-960 -----MRTHT RGAPSVFFIY LFCFVSAYVT DENPEVMIPF TNANYDSHPM bmy_06852T0/1-990 RSDATMRTHT RGAPSVFFIY LFCFVSAYVT DENPEVMIPF MNANYDSHPM BACU014237/1-959 -----MRTHT RGAPSVFFIY LFCFVSAYVT DENPEVMIPF MNANYDSHPM 101 150 ENSP00000332151/1-958 LYFSRAEVAE LQLRAASSHE HIAARLTEAV HTMLSSPLEY LPPWDPKDYS ENSBTAP00000006855/1-959 LYFSRAEVAE LQLRAASSHE HIAARLTEAV NTMLSSPLEY LPPWDPKEYS ENSTTRP00000015686/1-960 LYFSRAEVAK LQLRAASSHE HIAARLTEAV HIMLSSPLEY LPPWDPKEYS bmy_06852T0/1-990 LYFSRAEVAK LQLRAASSHE HIAARLTEAV HTMLSSPLEY LPPWDPKEYS BACU014237/1-959 LYFSRAEVAK LQLRAASSHE HIAARLTEAV HTMLSSPLEY LPPWDPKEYS 151 200 ENSP00000332151/1-958 ARWNEIFGNN LGALAMFCVL YPENIEARDM AKDYMERMAA QPSWLVKDAP ENSBTAP00000006855/1-959 ARWNEIYGNN LGALAMFCVL YPENMEARDM AKDYMERMAA QPSWLVKDAP ENSTTRP00000015686/1-960 ARWNEIYGNN LGALAMFCVL YPENIEARDM AKDYMERMAA QPSWLVKDAP bmy_06852T0/1-990 ARWNEIYGNN LGALAMFCXL ---------- ---------- ----LVKDAP BACU014237/1-959 ARWNEIYGNN LGALAMFCVL YPENIEARDM AKDYMERMAA QPSWLVKDAP 201 250 ENSP00000332151/1-958 WDEVPLAHSL VGFATAYDFL YNYLSKTQQE KFLEVIANAS GYMYETSYRR ENSBTAP00000006855/1-959 WDEVPLAHSL VGFATAYDFL YNYLSKTQQE KFLEVIANAS GYMYETSYRR ENSTTRP00000015686/1-960 WDEVPLAHSL VGFATAYDFL YNYLSKTQQE RFLEVIANAS GYMYETSYRR bmy_06852T0/1-990 WDEVPLAHSL VGFATAYDFL YNYLSKTQQE RFLEVIANAS GYMYETSYRR BACU014237/1-959 WDEVPLAHSL VGFATAYDFL YNYLSKTQQE RFLEVIANAS GYMYETSYRR 251 300 ENSP00000332151/1-958 GWGFQYLHNH QPTNCMALLT GSLVLMNQGY LQEAYLWTKQ VLTIMEKSLV ENSBTAP00000006855/1-959 GWGFQYLHNH QPTNCMALLT GSLVLMNQGY LQEAYLWTKQ VLTIMEKSLV ENSTTRP00000015686/1-960 GWGFQYLHNH QPTNCMALLT GSLVLMNQGY LQEAYLWTKQ VLTIMEKSLV bmy_06852T0/1-990 GWGFQYLHNH QPTNCMALLT GSLVLMNQGY LQEAYLWTKQ VLTIMEKSLV BACU014237/1-959 GWGFQYLHNH QPTNCMALLT GSLVLMNQGY LQEAYLWTKQ VLTIMEKSLV 301 350 ENSP00000332151/1-958 LLREVTDGSL YEGVAYGSYT TRSLFQYMFL VQRHFNINHF GHPWLKQHFA ENSBTAP00000006855/1-959 LLREVTDGSL YEGVAYGSYT TRSLFQYMFL VQRHFDINHF GHPWLKQHFA ENSTTRP00000015686/1-960 LLREVTDGSL YEGVAYGSYT TRSLFQYMFL VQRHFDINHF GHPWLKQHFA bmy_06852T0/1-990 LLREVTDGSL YEGVAYGSYT TRSLFQYMFL VQRHFDINHF GHPWLKQHFA BACU014237/1-959 LLREVTDGSL YEGVAYGSYT TRSLFQYMFL VQRHFDINHF GHPWLKQHFA 351 400 ENSP00000332151/1-958 FMYRTILPGF QRTVAIADSN YNWFYGPESQ LVFLDKFVMR NGSGNWLADQ ENSBTAP00000006855/1-959 FMYRTILPGF QRTVAIADSN YNWFYGPESQ LVFLDKFVMR NGSGNWLADQ ENSTTRP00000015686/1-960 FMYRTILPGF QRTVAIADSN YNWFYGPESQ LVFLDKFVMR NGSGNWLADQ bmy_06852T0/1-990 FMYRTILPGF QRTVAIADSN YNWFYGPESQ LVFLDKFVMR NGSGNWLADQ BACU014237/1-959 FMYRTILPGF QRTVAIADSN YNWFYGPESQ LVFLDKFVMR NGSGNWLADQ 401 450 ENSP00000332151/1-958 IRRNRVVEGP GTPSKGQRWC TLHTEFLWYD GSLKSVPPPD FGTPTLHYFE ENSBTAP00000006855/1-959 IRRNRVVEGP GTPSKGQRWC TLHTEFLWYD ASLKSVPPPD FGTPTLHYFE ENSTTRP00000015686/1-960 IRRNRVMEGP GTPSKGQRWC TLHTEFLWYD ASLKSVPPPD FGTPALHYFE bmy_06852T0/1-990 IRRNRVMEGP GTPSKGQRWC TLHTEFLWYD ASLKSVPPPD FGTPALHYFE BACU014237/1-959 IRRNRVMEGP GTPSKGQRWC TLHTEFLWYD ASLKSVPPPD FGTPALHYFE 451 500 ENSP00000332151/1-958 DWGVVTYGSA LPAEINRSFL SFKSGKLGGR AIYDIVHRNK YKDWIKGWRN ENSBTAP00000006855/1-959 DWGVVTYGSA LPAEINRSFL SFKSGKLGGR AIYDIVHRNK YKDWIKGWRN ENSTTRP00000015686/1-960 DWGVVTYGSA LPAEINRSFL SFKSGKLGGR AIYDIVHRNK YKDWIKGWRN bmy_06852T0/1-990 DWGVVTYGSA LPAEINRSFL SFKSGKLGGR AIYDIVHRNK YKDWIKGWRN BACU014237/1-959 DWGVVTYGSA LPAEINRSFL SFKSGKLGGR AIYDIVHRNK YKDWIKGWRN 501 550 ENSP00000332151/1-958 FNAGHEHPDQ NSFTFAPNGV PFITEALYGP KYTFFNNVLM FSPAVSKSCF ENSBTAP00000006855/1-959 FNAGHEHPDQ NSFTFAPNGV PFITEALYGP KYTFFNNVLM FSPAASKSCF ENSTTRP00000015686/1-960 FNAGHEHPDQ NSFTFAPNGV PFITEALYGP KYTFFNNVLM FSPAVSKSCF bmy_06852T0/1-990 FNAGHEHPDQ NSFTFAPNGV PFITEALYGP KYTFFNNVLM FSPAVSKSCF BACU014237/1-959 FNAGHEHPDQ NSFTFAPNGV PFITEALYGP KYTFFNNVLM FSPAVSKSCF 551 600 ENSP00000332151/1-958 SPWVGQVTED CSSKWSKYKH DLAASCQGRV VAAEEKNGVV FIRGEGVGAY ENSBTAP00000006855/1-959 SPWEGQVTED CSSKWSKYKH DPAASCQGRV VAAVEKNGVV FIRGEGVGAY ENSTTRP00000015686/1-960 SPWEGQVTED CSSKWSKYKH DLAASSQGRV VAAMEKNGVV FIRGEGVGAY bmy_06852T0/1-990 SPWEGQVTED CSSKWSKYKH DLAASCQGRV VAAVEKNGVV FIRGEGVGAY BACU014237/1-959 SPWEGQVTED CSSKWSKYKH DLAASCQGRV VAAVEKNGVV FIRGEGVGAY 601 650 ENSP00000332151/1-958 NPQLNLKNVQ RNLILLHPQL LLLVDQIHLG EESPLETAAS FFHNVDVPFE ENSBTAP00000006855/1-959 NPQLHLRNVQ RNLILLHPQL LLLVDQIHLG EDSPLERAAS FFHNVDFPFE ENSTTRP00000015686/1-960 NPQLHLKNVQ RNLILLHPQL LLLVDQIHLG EDSPLETAAG FFHNVDFSFE bmy_06852T0/1-990 NPQLRLKNVQ RNLMLLHPQL LLLVDQIHLG EDSPLETAAS FFHNVDFSFE BACU014237/1-959 NPQLRLKNVQ RNLMLLHPQL LLLVDQIHLG EDSPLETAAS FFHNVDFSFE 651 700 ENSP00000332151/1-958 ETVVDGVHGA FIRQRDGLYK MYWMDDTGYS EKATFASVTY PRGYPYNGTN ENSBTAP00000006855/1-959 ETVVDGVHGA LIRQRDGLYK MYWMDDTGYS EKGTFASVTY PRGYPYNGTN ENSTTRP00000015686/1-960 ETVVDGVHGA FIRQRDGLYK MYWMDDTGYS EKGTFASVTY PRGYPYNGTN bmy_06852T0/1-990 ETVVDGVHGA FIRQRDGLYK MYWMDDTGYS EKGTFASVTY PRGYPYNGTN BACU014237/1-959 ETVVDGVHGA FIRQRDGLYK MYWMDDTGYS EKGTFASVTY PRGYPYNGTN 701 750 ENSP00000332151/1-958 YVNVTMHLRS PITRAAYLFI GPSIDVQSFT VHGDSQQLDV FIATSKHAYA ENSBTAP00000006855/1-959 YVNVTTHLRS PVTRAAYLFI GPSIDVQSFS IHGDAQQLDV FVATSEHAYA ENSTTRP00000015686/1-960 YVNVTTHLRS PITRAAYLFI GPSIDVQSFS IHGDSQQLDV FIATGEHAYA bmy_06852T0/1-990 YVNVTTHLRS PITRAAYLFI GPSVDVQSFS IHGDSQQLDV FIATSEHAYA BACU014237/1-959 YVNVTTHLRS PITRAAYLFI GPSVDVQSFS IHGDSQQLDV FIATSEHAYA 751 800 ENSP00000332151/1-958 TYLWTGEATG QSAFAQVIAD RHKILFDRNS AIKSSIVPEV KDYAAIVEQN ENSBTAP00000006855/1-959 TYLWTGETAG QSAFAQVIAD RQKILFDRSS AIRSSVVPEV KDYAALVEQN ENSTTRP00000015686/1-960 TYLWTGETTE QLALAQVIAD RQKILFDWSS AIKSTVVPEV KDYAAIVEQN bmy_06852T0/1-990 TYLWTGETTE QLALAQVIAD RQKILFDRSS AIKSTVVPEV KDYAAIVEQS BACU014237/1-959 TYLWTGETTE QLALAQVIAD RQKILFDRSS AIKSTVVPEV KDYAAIVEQN 801 850 ENSP00000332151/1-958 LQHFKPVFQL LEKQILSRVR NTASFRKTAE RLLRFSDKRQ TEEAIDRIFA ENSBTAP00000006855/1-959 LQHFKPVFQL LEKQILSRVR NTASFRKTAE RLLRFSDKRQ TEEAIDRIFA ENSTTRP00000015686/1-960 LQHFKPVFQL LEKQILSRVR NTASFRKTAE RLLRFSDKRQ TEEAIDRIFA bmy_06852T0/1-990 LQHFKPVFQL LEKQILSRVR NTASFRKTAE RLLRFSDKRQ TEEAIDRIFA BACU014237/1-959 LQHFKPVFQL LEKQILSRVR NTASFRKTAE RLLRFSDKRQ TEEAIDRIFA 851 900 ENSP00000332151/1-958 IS--QQQQQQ SKSKKNRRAG KRYKFVDAVP DIFAQIEVNE KKIRQKAQIL ENSBTAP00000006855/1-959 IS-QQQQQQQ SKSKKNRRGG KRYKFVDAVP DIFAQIEVNE RKVRQKAQIL ENSTTRP00000015686/1-960 ISQQQQQQQQ SKSKKNRRGG KRYKFVDAVP DIFAQIEVNE KKIRQKAQIL bmy_06852T0/1-990 IS-QQQQQQQ SKSKKNRRGG KRYKFVDAVP DIFAQIEVNE KKIRQKAQIL BACU014237/1-959 IS-QQQQQQQ SKSKKNRRGG KRYKFVDAVP DIFAQIEVNE KKIRQKAQIL 901 950 ENSP00000332151/1-958 AQKELPIDED EEMKDLLDFA DVTYEKHKNG GLIKGRFGQA RMVTTTHSRA ENSBTAP00000006855/1-959 AQKELPVDED EEMKDLLDFA DITYEKHKNG DVMNGRFGQA RMVTTTHSRA ENSTTRP00000015686/1-960 AQKELPIDED EEMKDLLDFA DVTYEKHKNG DLMKGRFGQA RMVTTTRSRA bmy_06852T0/1-990 AQKELPIDED EEMKDLLDFA DVTYEKHKNG DLMKGRFGQT RMVTTTRSRA BACU014237/1-959 AQKELPIDED EEMKDLLDFA DVTYEKHKNG DLMKGRFGQA RMVTTTRSRA 951 1000 ENSP00000332151/1-958 PSLSASYTRL FLILNIAIFF VMLAMQLTYF QRAQSLHGQR CLYAVLLIDS ENSBTAP00000006855/1-959 PALSASYTRL FLILNIAIFF VMLAMQLTYF QRAQSLHGQR CLYAVLLIDS ENSTTRP00000015686/1-960 PALSASYTRL FLILNIAIFF VMLAMQLTYF QRAQSLHGQR CLYAVLLIDS bmy_06852T0/1-990 PALSASYTRL FLILNIAIFF VMLAMQLTYF QRAQSLHGQR CLYAVLLIDS BACU014237/1-959 PALSASYTRL FLILNIAIFF VMLAMQLTYF QRAQSLHGQR CLYAVLLIDS 1001 1050 ENSP00000332151/1-958 CILLWLYSSC SQSQC ENSBTAP00000006855/1-959 CILLWLYSSC SQSQC ENSTTRP00000015686/1-960 CILSWLYSSC SQSQC bmy_06852T0/1-990 CILLWLYSSC SQSQC BACU014237/1-959 CILLWLYSSC SQSQC