KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:36 2014 Check: 00 .. Name: ENSTTRP00000008687/1-273 Len: 307 Check: 6876 Weight: 1.00 Name: ENSP00000272995/1-264 Len: 307 Check: 7897 Weight: 1.00 Name: ENSBTAP00000006858/1-264 Len: 307 Check: 8062 Weight: 1.00 Name: bmy_04913T0/1-278 Len: 307 Check: 2091 Weight: 1.00 Name: BACU010977/1-157 Len: 307 Check: 8164 Weight: 1.00 // 1 50 ENSTTRP00000008687/1-273 ---------- ---------- -----MAGEQ KPSSNLLEQF ILLAKGTSGS ENSP00000272995/1-264 ---------- ---------- -----MAGEQ KPSSNLLEQF ILLAKGTSGS ENSBTAP00000006858/1-264 ---------- ---------- -----MAGEQ KPSSNLLEQF ILLAKGTSGS bmy_04913T0/1-278 MSHISRRPNK GVFLMELHSI SQDQRMAGEQ KPSSNLLEQF ILLAKGTSGS BACU010977/1-157 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008687/1-273 ALTALISQVL EAPGVYVFGE LLELANVQEL AEGGNAAYLQ LLNLFAYGTY ENSP00000272995/1-264 ALTALISQVL EAPGVYVFGE LLELANVQEL AEGANAAYLQ LLNLFAYGTY ENSBTAP00000006858/1-264 ALTALISQVL EAPGVYVFGE LLELANVQEL AEGANAAYLQ LLNLFAYGTY bmy_04913T0/1-278 ALTALISQVL EAPGVYVFGE LLELANVQE- ---------- LLNLFAYGTY BACU010977/1-157 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008687/1-273 PDYIANKESL PELSTAQQNK LKHLTIVSLA SRMKCIPYSV LLKDLEMRNL ENSP00000272995/1-264 PDYIANKESL PELSTAQQNK LKHLTIVSLA SRMKCIPYSV LLKDLEMRNL ENSBTAP00000006858/1-264 PDYIANKESL PELSTAQQNK LKHLTIVSLA SRMKCIPYSV LLKDLEMRNL bmy_04913T0/1-278 PDYIANKESL PELSTAQQNK LKHLTIVSLA SRMKCIPYSV LLKDLEMRNL BACU010977/1-157 ---------- ---------- ---------- --MKCIPYSV LLKDLEMRNL 151 200 ENSTTRP00000008687/1-273 RELEDLIIEA VYTDIIQGKL DQRNQLLEVD FCIGRDIRKK DINNIVKTLH ENSP00000272995/1-264 RELEDLIIEA VYTDIIQGKL DQRNQLLEVD FCIGRDIRKK DINNIVKTLH ENSBTAP00000006858/1-264 RELEDLIIEA VYTDIIQGKL DQRNQLLEVD FCIGRDIRKK DINNIVKTLH bmy_04913T0/1-278 RELEDLIIEA VYTDIIQGKL DQRNQLLEVD FCIGRDIRKR DINNIVKTLH BACU010977/1-157 RELEDLIIEA VYTDIIQGKL DQRNQLLEVD FCIGRDIRKR DINNIVKTLH 201 250 ENSTTRP00000008687/1-273 EWCDGCEAVL LGIEQQVLRA NQYKENHSRT QQQVEAERGN LDVFLPNLIT ENSP00000272995/1-264 EWCDGCEAVL LGIEQQVLRA NQYKENHNRT QQQVEAEVTN I--------- ENSBTAP00000006858/1-264 EWCDGCEAVL LGIEQQVLRA NQYKENHSRT QQQVEAEVTN I--------- bmy_04913T0/1-278 EWCDGCEAVL LGIEQQVLRA NQYKENHSRT QQQVEAEVTN I--------- BACU010977/1-157 EWCDGCEAVL LGIEQQVLRA NQYKENHSRT QQQVEAEVTN I--------- 251 300 ENSTTRP00000008687/1-273 AAIFWLPTSR RHSKLLRPPQ LRRWSNSWLN ESVPPMLSRG SPLRRCPK-- ENSP00000272995/1-264 ---------K KTLKATASSS AQEMEQQLAE RECPPHAEQR QPTKKMSKVK ENSBTAP00000006858/1-264 ---------K KTLKATASSS AQEMEQQLAE RECPPHAEQR QPTKKMSKVK bmy_04913T0/1-278 ---------K KTLKATASSS AQEMEQQLAE RECPPHAEQR QPTKKMSKVK BACU010977/1-157 ---------K KTLKATASSS AQEMEQQLAE RECPPHAEQR QPTKKMSKVK 301 350 ENSTTRP00000008687/1-273 ------- ENSP00000272995/1-264 GLVSSRH ENSBTAP00000006858/1-264 GLVSSRH bmy_04913T0/1-278 GLVSSRH BACU010977/1-157 GLVSSRH