KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:30:43 2014 Check: 00 .. Name: BACU018773/1-84 Len: 1155 Check: 5337 Weight: 1.00 Name: ENSTTRP00000008805/1-735 Len: 1155 Check: 2995 Weight: 1.00 Name: bmy_10052T0/1-590 Len: 1155 Check: 4612 Weight: 1.00 Name: ENSBTAP00000006889/1-869 Len: 1155 Check: 3898 Weight: 1.00 // 1 50 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 MEEDVXXXXX XXXXXXXXXX XXXXTDEPED PEFVLGPVPG EAENEADPGS bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ---------- ---------- ---------- ---------- ---------- 51 100 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 SCPGKEQNAD KRKQRPAVQD RMQASLLRRD LSHLDQLHEE KDLFIQNTRE bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ---------- ---------- ---------- ---------- ---------- 101 150 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ELRACRWRMG LLAKQQESVA AGPAAERAAG NRAAVGRLEA ASQRPCSELG bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ---------- ---------- ---------- ---------- ---------- 151 200 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 NEGDLQAKMT AVLQDSVSAV WHMEIQERQL EDARESAQAE APAARKCLRE bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ---------- ---------- ---------- ---------- ---------- 201 250 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 RGASGKAERN RLLRVRRSVY LQKEHGLRHQ KLVEDAQKNH RKAVKFLKAS bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ---------- ---------- ---------- ---------- ---------- 251 300 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 LGRIRKQEQR EELESREHAR RRMDAVLALK NSISANRETL RKFQAWGQAK bmy_10052T0/1-590 ---------- ---------- --SKAALRLN FEVC------ ---------- ENSBTAP00000006889/1-869 ---------- ---------- --MDAVLALK NSISANRETL RKFQAWGQAK 301 350 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 AELAEQRAQA EKEVILAQGG DAFKHFCHQR RRQELEAQNR AFEEEQKLRK bmy_10052T0/1-590 KELQGHLELL PKTGYIQALS SYSVQLKFLP RRSLPEDAGK YFDKESR--- ENSBTAP00000006889/1-869 TELAEQKAQA EKKAILAQGG DAFKHLCHQR RRQELEAQNR AFEEEQKRRK 351 400 BACU018773/1-84 -------MGA KVNDFLRRKE PSS------- ---------- ---------- ENSTTRP00000008805/1-735 HEIVSRILKE EAEEARRKQR PSPARPAGRP ILRDQTWSY- ---------- bmy_10052T0/1-590 -------VLE APMTIRVADQ IKPVGFTVHA IVTTSDLEL- ---------- ENSBTAP00000006889/1-869 QEIVSRLLKE EAVEDRRRPR PEPPRPAGQR SLRDQTWSYV ATFFDGQSTE 401 450 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------E GRSA-LPKSL LVKAASSESV QADRGSLGRE AGTLAQPEIP bmy_10052T0/1-590 ---------S PSGVDFGYCT VYEAIRTQVS LCNHSLLPQE FGFVGLPKFV ENSBTAP00000006889/1-869 APLCCPLLQE TRSRFYQSSP LLTAISSESV QGDGSLGGED --TLAWPEIP 451 500 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 GLWKED---- CKPYQXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10052T0/1-590 DIQPNDGFGT ILPLETLQLD VIFQPTEAKE YNFELVCKSE INRCFKLTCR ENSBTAP00000006889/1-869 GLWKED---- YKPFQVSKED VDRKPVGGTK MDKDILARTM QRLRSGVIHK 501 550 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 XXXXXXXXXX XXXXXXXXXX XXXDFDIGKV YKKKITLINA TYTINYCKLV bmy_10052T0/1-590 AVGVHPPLEL SHYQVKFAAT SLYDTSVATL YVINSRLSKN SPTPSVPRIG ENSBTAP00000006889/1-869 QVASGREFRG CPFNSKPKFI HFKDFDVGKV YKKKITLINA TYTINYCKLV 551 600 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 GVEELLGDFI HIDFDPPGPM PAGMSCEVLV TFKPTVNKDL EGNISFLAQT bmy_10052T0/1-590 LEDASPVGPT SFEFLLPPDS P--------I TISPSVGTVW PGKRCLVRVA ENSBTAP00000006889/1-869 GVDESLQDFI HVDFDPPGPL SAGMSCEVLV TFKPMINKDL EGNVSFLAQT 601 650 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 GRFSVPLKCS AKKCSLSLDK ELIDFGSCVV GETASRTVTL TNLGGLGTGL bmy_10052T0/1-590 FRPVLPSELI HQEALQALTK EAEAKSSQKD TATQRKDQRR QSFSTLWLQN ENSBTAP00000006889/1-869 GGFSVPLKCS TKKCSLSLDK ELIDFGSYTV GETAIRTITL TNTGGLGTKF 651 700 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 RFLLASECCE MDTSPSVFST -------SSN FTYEDKGFDS NVATSFSKQL bmy_10052T0/1-590 RDRLFQASAS QPPELQKEDL TSS----SQE YQAAQATLTR SFQGKFDKFV ENSBTAP00000006889/1-869 RFLLASETCE MDTSQSVLKL VSVPLLLSST FTYEDKSLYD KFTTSFSEHQ 701 750 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 TAGNESVPAD VPSQKESGKL DIKEKEEGRP ---------- ---------- bmy_10052T0/1-590 ---------- VPCVVASGDT KDRKGTEPLS FSPHNTVYLE LWCPAVAPSI ENSBTAP00000006889/1-869 MEGNESSPTD VPSQKESGKL DVKEQEEGHP --------IE SEGVTLTTIM 751 800 BACU018773/1-84 ---------- -------LGS AG-------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- -------VGE PG-------- ---------- ---------- bmy_10052T0/1-590 VVTSDKGKTI ADFGDIAVGH RG-------- ---------- ---------- ENSBTAP00000006889/1-869 TIPLNEEQME FSLGETTEGD IGPFSSIKVP VIFTPIVPGT VQNSFKVVFK 801 850 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- ---------- ---------- --------Q- ---------- bmy_10052T0/1-590 ---------- ---------- ---------- --------IK KVSIQNISPE ENSBTAP00000006889/1-869 NQQCPTLYFK VVGVAIDVPV WVPKPNVDLK ICMYDRLYQD SILVHTRSKA 851 900 BACU018773/1-84 ----TMEVNK TAGAQL---- AGG------- ---------- --ADVDDG-- ENSTTRP00000008805/1-735 ---------- ---------- AEG------- ---------- --LAGGEG-- bmy_10052T0/1-590 GLDLEYSVLN PNGPFVLLNP ISK------- ---------- --LASGETRV ENSBTAP00000006889/1-869 ALRLKFEVCK ELRGHVELLP ETGYIQALSS YSVQLKFLPR HSLPEDAGKY 901 950 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- ---------- -PRGTF---- ---------- ---------- bmy_10052T0/1-590 LVLSFYPRES VLAQEMLDVI TKRGTLSLAL VGTGVASVTT CSIEGDVLNM ENSBTAP00000006889/1-869 FDKETRVLEA PMTIRVADQI KPVGFTVHAV VTTSDLELSP AGLDFGYCTI 951 1000 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- ---------- ---------- ---------- ---------- bmy_10052T0/1-590 GYAIAGESTS AGFKVKR--- ---------- ---------- ---------- ENSBTAP00000006889/1-869 YEAIRTQISL CNHSLLPQEF GFVGLPKFVD IQPNDGFGTI LPLETLQLDV 1001 1050 BACU018773/1-84 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- ---------- ---------- ---------- ---------- bmy_10052T0/1-590 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 IFQPTKAKEY NFELICKSEI NRCFKLACRA VGVYPPLELS HNQIKFAATS 1051 1100 BACU018773/1-84 ---------- -------RSA LQEAFPRLDP PPPTTRKRTP RALKTTQDML ENSTTRP00000008805/1-735 ---------- ---------- ------REGE GPSGGLGGAE FFQ------- bmy_10052T0/1-590 ---------- VVGTRHLPRL LGGVVPQEGV SPAL--VREP VRVQAAPTAP ENSBTAP00000006889/1-869 LYDTSVATLY VINSHLSMNS LTHSVPRIGS EDAFPVGPTS FEFLLPPDSP 1101 1150 BACU018773/1-84 ISSQPVLSS- ---------- ---------- ---------- ---------- ENSTTRP00000008805/1-735 ---------- ---------- ---------- ---------- ---------- bmy_10052T0/1-590 PSSGHLHGPL ---------- ---------- ---------- ---------- ENSBTAP00000006889/1-869 ITISPLVGTV WPGKRCLVRV AFRPVLPSEL IHQEAFQALS RKAEACAYSE 1151 1200 BACU018773/1-84 ----- ENSTTRP00000008805/1-735 ----- bmy_10052T0/1-590 ----- ENSBTAP00000006889/1-869 GEQTK