KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:44 2014 Check: 00 .. Name: ENSP00000335544/1-447 Len: 454 Check: 4129 Weight: 1.00 Name: ENSBTAP00000006892/1-454 Len: 454 Check: 8449 Weight: 1.00 Name: ENSTTRP00000006362/1-449 Len: 454 Check: 382 Weight: 1.00 Name: bmy_13085T0/1-405 Len: 454 Check: 5927 Weight: 1.00 Name: BACU004499/1-454 Len: 454 Check: 8359 Weight: 1.00 // 1 50 ENSP00000335544/1-447 MELLKLNRSV QGTGPGPGAS LCRPGAPLLN SSSVGNLSCE PPRIRGAGTR ENSBTAP00000006892/1-454 MELLKPNRSV LGSGPGPGAS LCRSGGPLLN GSGTGNLSCE PPRIRGAGTR ENSTTRP00000006362/1-449 MELLKPNRSV PGYGPGPAAS LCRPGGPLLN GSGTGNLSCE PPRIRGAGTR bmy_13085T0/1-405 ---------- ---------- ---------- ---------- ---------M BACU004499/1-454 MELLKPNRSV PGYGPGPAAS LCRPGGPLLN GSGTGNLSCE PPRIRGAGTR 51 100 ENSP00000335544/1-447 ELELAIRITL YAVIFLMSVG GNMLIIVVLG LSRRLRTVTN AFLLSLAVSD ENSBTAP00000006892/1-454 ELELAIRVTL YAVIFLMSVG GNVLIIVVLG LSRRLRTVTN AFLLSLAVSD ENSTTRP00000006362/1-449 ELELAIRVTL YAVIFLMSVG GNVLIIVVLG LSRRLRTVTN AFLLSLAVSD bmy_13085T0/1-405 ELELAIRVTL YAVIFLMSVG GNVLIIVVLG LSRRLRTVTN AFLLSLAVSD BACU004499/1-454 ELELAIRVTL YAVIFLMSVG GNVLIIVVLG LSRRLRTVTN AFLLSLAVSD 101 150 ENSP00000335544/1-447 LLLAVACMPF TLLPNLMGTF IFGTVICKAV SYLMGVSVSV STLSLVAIAL ENSBTAP00000006892/1-454 LLLAVACMPF TLLPNLMGTF IFGTVVCKAV SYFMGVSVSV STLSLVAIAL ENSTTRP00000006362/1-449 LLLAVACMPF TLLPNLMGTF IFGTVVCKAV SYFMGVSVSV STLSLVAIAL bmy_13085T0/1-405 LLLAVACMPF TLLPNLMGTF IFGTVVCKAV SYFMGVSVSV STLSLVAIAL BACU004499/1-454 LLLAVACMPF TLLPNLMGTF IFGTVVCKAV SYFMGVSVSV STLSLVAIAL 151 200 ENSP00000335544/1-447 ERYSAICRPL QARVWQTRSH AARVIVATWL LSGLLMVPYP VYTVVQPVGP ENSBTAP00000006892/1-454 ERYSAICRPL QARVWQTRSH AARVIVATWM LSGLLMVPYP VYTAVQPAGP ENSTTRP00000006362/1-449 ERYSAICRPL QARVWQTRSH AARVIVATWM LSGLLMVPYP VYTAVQPAGP bmy_13085T0/1-405 ERYSAICRPL QARVWQTRSH AARVIVATWM LSGLLMVPYP VYTAVQPAGP BACU004499/1-454 ERYSAICRPL QARVWQTRSH AARVIVATWM LSGLLMVPYP VYTAVQPAGP 201 250 ENSP00000335544/1-447 RVLQCVHRWP SARVRQTWSV LLLLLLFFIP GVVMAVAYGL ISRELYLGLR ENSBTAP00000006892/1-454 RVLQCMHRWP SARVRQTWSV LLLLLLFFVP GVVMAVAYGL ISRELYLGLR ENSTTRP00000006362/1-449 RVLQCMHRWP SARVRQTWSV LLLLLLFFVP GVVMAVAYGL ISRELYLGLR bmy_13085T0/1-405 RVLQCMHRWP SARVRQTWSV LLLLLLFFVP GVVMAVAYGL ISRELYLGLR BACU004499/1-454 RVLQCMHRWP SARVRQTWSV LLLLLLFFVP GVVMAVAYGL ISRELYLGLR 251 300 ENSP00000335544/1-447 FDGDSDSDSQ SRVRNQGGLP -----GAVHQ NGRCRPETGA VGEDSDGCYV ENSBTAP00000006892/1-454 FDGDSDSESQ SRVGSQGGLP GGTGQGPAQA NGRCRSETRL AGEDGDGCYV ENSTTRP00000006362/1-449 FDGDSDSESQ SRVGSQGGLP -----GPAHP NGRCGSETRL AGEDGDGCYV bmy_13085T0/1-405 FDGDSDSESQ SRVGSQGGLP GGTGRGPAHP NGRCGSETRL AGEDGDGCYV BACU004499/1-454 FDGDSDSESQ SRVGSQGGLP GGTGRGPAHP NGRCGSETRL AGEDGDGCYV 301 350 ENSP00000335544/1-447 QLPRSRPALE LTALTA--PG PGSGSRPTQA KLLAKKRVVR MLLVIVVLFF ENSBTAP00000006892/1-454 QLPRSRPALE MSALTAPTPG PGSGTRPAQA KLLAKKRVVR MLLVIVVLFF ENSTTRP00000006362/1-449 QLPRSRPVLE LSALTGPTPG SGSCTRPAQA KLLAKKRVVR MLLVIVVLFF bmy_13085T0/1-405 QLPRSRPVLE LSALTGPTPG PGSGTRPAQA KLLAKKRVVR MLLVIVVLFF BACU004499/1-454 QLPRSRPVLE LSALTGPTPG PGSGTRPAQA KLLAKKRVVR MLLVIVVLFF 351 400 ENSP00000335544/1-447 LCWLPVYSAN TWRAFDGPGA HRALSGAPIS FIHLLSYASA CVNPLVYCFM ENSBTAP00000006892/1-454 LCWLPVYSAN TWRAFDGPGA HRALSGAPIS FIHLLSYASA CVNPLVYCFM ENSTTRP00000006362/1-449 LCWLPVYSAN TWRAFDGPGA HRALSGAPIS FIHLLSYASA CVNPLVYCFM bmy_13085T0/1-405 LCWLPVYSAN TWRAFDGPGA HRALSGAPIS FIHLLSYASA CVNPLVYCFM BACU004499/1-454 LCWLPVYSAN TWRAFDGPGA HRALSGAPIS FIHLLSYASA CVNPLVYCFM 401 450 ENSP00000335544/1-447 HRRFRQACLE TCARCCPRPP RARPRALPDE DPPTPSIASL SRLSYTTIST ENSBTAP00000006892/1-454 HRRFRQACLD TCTRCCPRPP RARPRPLPDE DPPTPSIASL SRLSYTTIST ENSTTRP00000006362/1-449 HRRFRQACLD TCARCCPRPP RARPRPLPDE DPPTPSIASL SRLSYTTIST bmy_13085T0/1-405 HRRFRQACLD TCARCCPRPP RARPRPLPDE DPPTPSIASL SRLSYTTIST BACU004499/1-454 HRRFRQACLD TCAHCCPRPP RARPRPLPDE DPPTPSIASL SRLSYTTIST 451 500 ENSP00000335544/1-447 LGPG ENSBTAP00000006892/1-454 LGPG ENSTTRP00000006362/1-449 LGPG bmy_13085T0/1-405 LGPG BACU004499/1-454 LGPG