KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:47 2014 Check: 00 .. Name: ENSBTAP00000006899/1-246 Len: 247 Check: 123 Weight: 1.00 Name: ENSTTRP00000008083/1-242 Len: 247 Check: 8803 Weight: 1.00 Name: ENSP00000241463/1-242 Len: 247 Check: 5899 Weight: 1.00 Name: bmy_16478T0/1-242 Len: 247 Check: 5020 Weight: 1.00 Name: BACU000129/1-237 Len: 247 Check: 87 Weight: 1.00 // 1 50 ENSBTAP00000006899/1-246 SGVRSVRPPT MSGHFLLAPI PESSSDYLLP KDIKLAVLGA GRVGKSAMIV ENSTTRP00000008083/1-242 -----MRPPT MSGHFLLAPI PESSSDYLLP KDIKLAVLGA GRVGKSAMIV ENSP00000241463/1-242 -----MRPLS MSGHFLLAPI PESSSDYLLP KDIKLAVLGA GRVGKSAMIV bmy_16478T0/1-242 -----MRAPT MSGHFLLAPI PESSSDYLLP RDIKLAVLGA GRVGKSAMIV BACU000129/1-237 ---------- MSGHFLLAPI PESSSDYLLP RDIKLAVLGA GRVGKSAMIV 51 100 ENSBTAP00000006899/1-246 RFLTKRFIGD YEPNTGKLYS RLVYVEGDQV SLQIQDTPGG IQVQDSLMQA ENSTTRP00000008083/1-242 RFLTKRFXXX XXXXXXKLYS RLVCVEGDQL SLQIQDTPGG IQVQDSLSPA ENSP00000241463/1-242 RFLTKRFIGD YEPNTGKLYS RLVYVEGDQL SLQIQDTPGG VQIQDSLPQV bmy_16478T0/1-242 RFLTKRFIGD YEPNTGKLYS RLVCVEGDQL SLQIQDTPGG LQVQDSLSQA BACU000129/1-237 RFLTKRFIGD YEPNTGKLYS RLVCVEGDQL SLQIQDTPGG LQVQDSLSQA 101 150 ENSBTAP00000006899/1-246 GDPLSKCVQW AEGFLLVYSI TDYDSYLAIR PLHQHIRKVH PDSRAPIVIV ENSTTRP00000008083/1-242 VDSLSKCVQW AEGFLLVYSI TDYDSYLSIR PLYQHIRKVH PDSKAPVIIV ENSP00000241463/1-242 VDSLSKCVQW AEGFLLVYSI TDYDSYLSIR PLYQHIRKVH PDSKAPVIIV bmy_16478T0/1-242 VDSLSKCVQW AEGFLLVYSI TDYDSYLSIR PLYQHIRKVH PDSKAPVIIV BACU000129/1-237 VDSLSKCVQW AEGFLLVYSI TDYDSYLSIR PLYQHIRKVH PDSKAPVIIV 151 200 ENSBTAP00000006899/1-246 GNKGDLLHAR QVQTREGVQL ANELGSLFLE VSTSENYEDV CDAFRHLCRE ENSTTRP00000008083/1-242 GNKGDLLHAR QVQTRDGIQL ANELGSLFLE ISTSENYEDV CDVFQHLCKE ENSP00000241463/1-242 GNKGDLLHAR QVQTQDGIQL ANELGSLFLE ISTSENYEDV CDVFQHLCKE bmy_16478T0/1-242 GNKGDLLHAR QVQTRDGIQL ANELGSLFLE ISTSENYEDV CDVFQHLCKE BACU000129/1-237 GNKGDLLHAR QVQTRDGIQL ANELGSLFLE ISTSENYEDV CDVFQHLCKE 201 250 ENSBTAP00000006899/1-246 VSKLHNLGSE RRRASVVPRP RSPNMQDLKR RFKQALSSKA KAPSAP- ENSTTRP00000008083/1-242 VSKLHSLGGE RRRVSIIPRP RSPNMQDLKR RFKQALSSKA KAPSTLG ENSP00000241463/1-242 VSKMHGLSGE RRRASIIPRP RSPNMQDLKR RFKQALSPKV KAPSALG bmy_16478T0/1-242 VSKLHSLGGE RRRASIIPRP RSPNMQDLKR RFKQALSSKA KAPSALG BACU000129/1-237 VSKLHSLGGE RRRASIIPRP RSPNMQDLKR RFKQALSSKA KAPSALG