KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:50 2014 Check: 00 .. Name: ENSTTRP00000011532/1-467 Len: 479 Check: 4566 Weight: 1.00 Name: BACU019906/1-474 Len: 479 Check: 4196 Weight: 1.00 Name: ENSP00000378028/1-474 Len: 479 Check: 3515 Weight: 1.00 Name: bmy_10671T0/1-348 Len: 479 Check: 221 Weight: 1.00 Name: ENSBTAP00000006908/1-474 Len: 479 Check: 3236 Weight: 1.00 // 1 50 ENSTTRP00000011532/1-467 MSSEDREAQE DELLALASIY DGDEFRKAES VQGGE-RIYL DLP---NFIV BACU019906/1-474 MSSEDREAQE DELLALASIY DGDEFRKAES VQGGETRIYL DLPQNFKIFV ENSP00000378028/1-474 MSSEDREAQE DELLALASIY DGDEFRKAES VQGGETRIYL DLPQNFKIFV bmy_10671T0/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006908/1-474 MSSEDREAQE DELLALASIY DGDEFRKAES VQGGETRIHL DLPQNFKIFV 51 100 ENSTTRP00000011532/1-467 SGNSNECLQN SGFEYTICFL PPLVLNFELP PDYPSSAPPS FTLSGKWLSP BACU019906/1-474 SGNSNECLQN SGFEYTICFL PPLVLNFELP PDYPSSAPPS FTLSGKWLSP ENSP00000378028/1-474 SGNSNECLQN SGFEYTICFL PPLVLNFELP PDYPSSSPPS FTLSGKWLSP bmy_10671T0/1-348 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000006908/1-474 SGNSNECLQN SGFEYTICFL PPLVLNFELP PDYPSSSPPS FTLSGKWLSP 101 150 ENSTTRP00000011532/1-467 TQLSALCKHL DNLWEEHRGS VVLFAWMQFL KEETLAYLNI VSPFELKMGS BACU019906/1-474 TQLSALCKHL DNLWEEHRGS VVLFAWMQFL KEETLAYLNI VSPFELKMGS ENSP00000378028/1-474 TQLSALCKHL DNLWEEHRGS VVLFAWMQFL KEETLAYLNI VSPFELKIGS bmy_10671T0/1-348 ---------- ---------- ------MQFL KEETLAYLNI VSPFELKMGS ENSBTAP00000006908/1-474 TQLSALCKHL DNLWEEHRGS VVLFAWMQFL KEETLAYLNI VSPFELTMGS 151 200 ENSTTRP00000011532/1-467 QKKVQ-RMAQ ASS-TELDF- RAAGSDVDQA EVVXXXXXXX XXXXXXXXXX BACU019906/1-474 QKKVQRRMAQ VSSNTELDFG GAAGSDVDQE EVVDERAVQD VESLSSLIQE ENSP00000378028/1-474 QKKVQRRTAQ ASPNTELDFG GAAGSDVDQE EIVDERAVQD VESLSNLIQE bmy_10671T0/1-348 QKKVQRRMAQ ASSNTELDFG GAAGSDVDQE EVVDERAVQD VESLSSLIQE ENSBTAP00000006908/1-474 QKKVQRRMAQ ASSNTELDFG GATGSDIDQE EVVDERAVQD VESLSSLIQE 201 250 ENSTTRP00000011532/1-467 XXXXXXXXXX XXXXXXXXXX XXXXXXXLGS ECMYFLECRH VYCKACLKDY BACU019906/1-474 ILDFDQAQQI KCFNSKLFLC NICFCEKLGS ECMYFLECRH VYCKACLKDY ENSP00000378028/1-474 ILDFDQAQQI KCFNSKLFLC SICFCEKLGS ECMYFLECRH VYCKACLKDY bmy_10671T0/1-348 ILDFDQAQQI KCFNSKLFLC NICFCEKLGS ECMYFLECRH VYCKACLKDY ENSBTAP00000006908/1-474 ILDFDQAQQI KCFNSKLFLC NICFCEKLGS ECMYFLECRH VYCKACLKDY 251 300 ENSTTRP00000011532/1-467 FEIQIRDGQV QCLNCPEPKC PSVATPGQVK ELVEAELFAR YDRLLLQSTL BACU019906/1-474 FEIQIRDGQV QCLNCPEPKC PSVATPGQVK ELVEAELFAR YDRLLLQSTL ENSP00000378028/1-474 FEIQIRDGQV QCLNCPEPKC PSVATPGQVK ELVEAELFAR YDRLLLQSSL bmy_10671T0/1-348 FEIQIRDGQV QCLNCPEPKC PSVATPGQVK ELVEAELFAR YDRLLLQSTL ENSBTAP00000006908/1-474 FEIQIRDGQV QCLNCPEPKC PSVATPGQVK ELVEAELFAR YDRLLLQSTL 301 350 ENSTTRP00000011532/1-467 DLMADVVYCP RPSCQLPVMQ EPGCTMGICS SCNFAFCTLC RLTYHGVSPC BACU019906/1-474 DLMADVVYCP RPSCQLPVMQ EPGCTMGICS SCNFAFCTLC RLTYHGVSPC ENSP00000378028/1-474 DLMADVVYCP RPCCQLPVMQ EPGCTMGICS SCNFAFCTLC RLTYHGVSPC bmy_10671T0/1-348 DLMADVVYCP RPSCQLPVMQ EPGCTMGICS SCNFAFCTLC RLTYHGVSPC ENSBTAP00000006908/1-474 DLMADVVYCP RPSCQLPVMQ EPGCTMGICS SCNFAFCTLC RLTYHGVSPC 351 400 ENSTTRP00000011532/1-467 KVTAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019906/1-474 KVTAGGTFHF ---LWVVNFI HWLLFIYRIE QLVF--ALRR MLYQIILACA ENSP00000378028/1-474 KVTAEKLMDL RNEYLQADEA NKRLLDQRYG KRVIQKALEE MESKEWLEKN bmy_10671T0/1-348 KVTAEKLMDL RNEYLQADEA NKRFLEQRYG KRVIQKALEE MESKEWLEKN ENSBTAP00000006908/1-474 KVTAEKLMDL RNEYLQADEA NKRFLEQRYG KRVIQKALEE MESKEWLEKN 401 450 ENSTTRP00000011532/1-467 XXXXXXX--- --XXXXXKLD GCNKMTCTGC MQYFCWICMG SLSRANPYKH BACU019906/1-474 FLFCFCSLDI FLCLSHQKLD GCNKMTCTGC MQYFCWICMG SLSRANPYKH ENSP00000378028/1-474 SKSCPCC--- --GTPIEKLD GCNKMTCTGC MQYFCWICMG SLSRANPYKH bmy_10671T0/1-348 SKSCPCC--- --GTPIEKLD GCNKMTCTGC MQYFCWICMG SLSRANPYKH ENSBTAP00000006908/1-474 SKSCPCC--- --GTPIEKLD GCNKMTCTGC MQYFCWICMG SLSRANPYKH 451 500 ENSTTRP00000011532/1-467 FTDPVSPCFN RLFHAVDVNG VIWEDEFED BACU019906/1-474 FTDTASPCFN RLFHAVDVNG DIWEDEVED ENSP00000378028/1-474 FNDPGSPCFN RLFYAVDVDD DIWEDEVED bmy_10671T0/1-348 FTDTASPCFN RLFHAVDVNG DIWEDEVED ENSBTAP00000006908/1-474 FTDPASPCFN RLFHAVDVNG DIWEDEIED