KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:51 2014 Check: 00 .. Name: ENSP00000386380/1-569 Len: 576 Check: 4864 Weight: 1.00 Name: ENSBTAP00000006938/1-571 Len: 576 Check: 6454 Weight: 1.00 Name: ENSTTRP00000005591/1-572 Len: 576 Check: 8206 Weight: 1.00 Name: BACU017676/1-539 Len: 576 Check: 3841 Weight: 1.00 Name: bmy_17709T0/1-488 Len: 576 Check: 2226 Weight: 1.00 // 1 50 ENSP00000386380/1-569 ---MKVLLRL ICFIALLISS LEADKCKERE EKIILVSSAN EIDVRPCPLN ENSBTAP00000006938/1-571 FQTSKIILLI VRFLT----- LSCDKCEEHE EKITLVSPAR EIDARSCPLI ENSTTRP00000005591/1-572 ---MKVLFRL VCFIALLTAS LEADKCVERE EEVILVSSAH EIDARSCPLI BACU017676/1-539 ---------- ---------- MTARHLYLRK ETPGFINTKI NF-------- bmy_17709T0/1-488 ---MKVLFRL VCFIALLTSS LEADKCEERE EEVILVSSAR EIDARSCPLI 51 100 ENSP00000386380/1-569 PNEHKGTITW YKDDSKTPVS TEQASRIHQH KEKLWFVPAK VEDSGHYYCV ENSBTAP00000006938/1-571 TSAHKEPITW YKNDSTTPVS TERGSRIHQH KDKLWFVPAE VEDSGAYYCS ENSTTRP00000005591/1-572 LSEHKGPIIW YKNDSKTPVS TERDSRIHQH KDKLWFVPAE VEDSGYYYCA BACU017676/1-539 -----GLFLX XXXXXXXXXX XXXXXXXXXX ----XXXPAE VEDSGYYYCA bmy_17709T0/1-488 LSEHKGPIIW YKNDGKTPVS TERDSRIHQH KDKLWFVPAE VEDSGYYYCA 101 150 ENSP00000386380/1-569 VRNSSYCLRI KISAKFVENE PNLCYNAQAI FKQKLPVAGD GGLVCPYMEF ENSBTAP00000006938/1-571 VRNSTYCLKI KIVVEFVQHE PNLCYNERTV FTQRLLTAGD GQLVCPYLDF ENSTTRP00000005591/1-572 VSNSTYCLKT KIAAEFVQHE PNLCYNSQAV FTQRLLIPGD GQLVCPYLDF BACU017676/1-539 VSNSTYCLKT KIAAEFVQHE PNLCYNSQAV FTQRLLIPGD GQLVCPYLDF bmy_17709T0/1-488 VSNSTYCLKT KIAAEFVQHE PNLCYNSQAV FTQRLLIPGD GQLVCPYLDF 151 200 ENSP00000386380/1-569 FKNENNELPK LQWYKDCKPL LLDNIHFSGV KDRLIVMNVA EKHRGNYTCH ENSBTAP00000006938/1-571 LKDENNELPQ VQWYKDCKPL LLDNVNFAGV TNKLIITNVN TAHSGHYMCH ENSTTRP00000005591/1-572 FRDENNELPQ IQWYKDCKPL LLDNINFVGI TNKLIITNVT TAHNGHYTCH BACU017676/1-539 FKDENNELPQ IQWYKDCKPL LLDNINFVGI ANKLIITNVT TAHNGHYTCH bmy_17709T0/1-488 FKDENNELPQ IQWYKDCKPL LLDNINFVGI TNKLIITNVT TAHNGHYT-- 201 250 ENSP00000386380/1-569 ASYTYLGKQY PITRVIEFIT LEENKPTRPV IVSPANETME VDLGSQIQLI ENSBTAP00000006938/1-571 ASYTHLGKQY RVTRAIKLIT LEKSRNTKPE IVSPANETME VVLGSWLQLI ENSTTRP00000005591/1-572 ASYAHLGKQY HVTRAIKLIT LVKSRNKRPE IVSPANETIE VVLGSWLQLI BACU017676/1-539 ASYTHLGKQY RVSRVIELIT LVKSRKKRPE IVSPANETIE VVLGSWLQLI bmy_17709T0/1-488 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000386380/1-569 CNVTGQLSDI AYWKWNGSVI DEDDPVLGED YYSVENPANK RRSTLITVLN ENSBTAP00000006938/1-571 CNVTGRLSNY VYWKWNGSMV STYTPVLEED FITVENPLNR RRSTVLARLN ENSTTRP00000005591/1-572 CNVTGQLSNF VYWRWNGSGI KEYEPMMMEE YN-VQNPLNK RKSAVIARLN BACU017676/1-539 CNVTGQLSNF VYWRWNGSAI KEYEPMMMEE FTYVQNPLNK RRSTVIARLN bmy_17709T0/1-488 ---------- ---------- ---------- ---VQNPLNK RRSTVIARLN 301 350 ENSP00000386380/1-569 ISEIESRFYK HPFTCFAKNT HGIDAAYIQL IYPVTNFQKH MIGICVTLTV ENSBTAP00000006938/1-571 ISAVESKFFL HPFTCLAKNT EGISTAYIQL IHPVPDFQKP TVGIFVMLTL ENSTTRP00000005591/1-572 ITAVESKFFL HPFICLAKNT EGRSTAYIQL IHPXXXXXXX XXXXXXXXXX BACU017676/1-539 ITAVESKFFL HPFICLAKNT EGRSTAYIQL MHPAPDFQTP TIGVFVMLTL bmy_17709T0/1-488 ITAVESKFFL HPFICLAKNT EGRSTAYIQL IHPAPDFQTP TIGVFVMLTL 351 400 ENSP00000386380/1-569 IIVCSVFIYK IFKIDIVLWY RDSCYDFLPI KASDGKTYDA YILYPKTVGE ENSBTAP00000006938/1-571 VITCSVCIYK VFKVDIVLWY RDSFYDFLPK KVSDGKTYDA YILCPKTPGE ENSTTRP00000005591/1-572 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSDGKTYDA YILCPKTPGE BACU017676/1-539 VITCSVFIYK VFKVDIVLWY RDSFYDFLPK KASDGKTYDA YILYPKTPAE bmy_17709T0/1-488 VITCSVFIYK VFKVDIVLWY RDSFYDFLPK KASDGKTYDA YILCPKTPGE 401 450 ENSP00000386380/1-569 GSTSDCDIFV FKVLPEVLEK QCGYKLFIYG RDDYVGEDIV EVINENVKKS ENSBTAP00000006938/1-571 GSTCNSDIFV FKVMPEVLEK QCGYKLFICG RDDYVGESIV EVVNENVKKS ENSTTRP00000005591/1-572 GSTSNSDIFV FKVLPEVLEK QCGYKLFISG RDDYVGESIV EVANETIKKS BACU017676/1-539 GSTSNSDIFV FNVLPEVLEK QCGYKLFISG RDDYVGESIV EVANETIKKS bmy_17709T0/1-488 GSTSNSDIFV FNVLPEVLEK QCGYKLFISG RDDYVGESIV EVANETIKKS 451 500 ENSP00000386380/1-569 RRLIIILVRE TSGFSWLGGS SEEQIAMYNA LVQDGIKVVL LELEKIQDYE ENSBTAP00000006938/1-571 RRLIIILVPE TSGFSWPGNS SEEQVAMYNA LIQEGIKVVL LELEKIPDYE ENSTTRP00000005591/1-572 RRLIIILARE ISGFCWLGNS SEEQIAMYNA LIQEGIKVVL LELEKIPDYE BACU017676/1-539 RRLIIILARE ISGFCWLGNS SEEQIAMYNA LIQEGIKVVL LELEKIPDYE bmy_17709T0/1-488 RRLIIILARE ISGFRWLGNS SEDQIAMYNA LIQEGIKVVL LELEKIPDYE 501 550 ENSP00000386380/1-569 KMPESIKFIK QKHGAIRWSG DFTQGPQSAK TRFWKNVRYH MPVQRRSPSS ENSBTAP00000006938/1-571 KMPESIKFIK QKQGVIRWSG DFREGSQSMN SRFWKKVRYH MPVQRQRRLS ENSTTRP00000005591/1-572 KMPESIKFIK QKQGAIRWSG DIREGSQTTN SRFWKKVRYH MPVQRQPPSA BACU017676/1-539 KMPESIKFIK QKQGAIRWSG DIREGSQSTN SRFWKKVRYH MPVQRQPPSA bmy_17709T0/1-488 KMPESIKFIK QKQGAIRWSG DIREGSQSTN SRFWKKVRYH MPAQRQPPSA 551 600 ENSP00000386380/1-569 KHQLLSPAT- ---KEKLQRE AHVPLG ENSBTAP00000006938/1-571 KHQLLSPATL LDSKEKRPME VHVPLG ENSTTRP00000005591/1-572 KHKLLSPATQ RDSKEKRPLE VHVPLG BACU017676/1-539 NHKLLSPATQ LDSKEKRPLE VHVPLG bmy_17709T0/1-488 KHKLLSPATQ LDCKEKRPLE VHVPLG