KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:51 2014 Check: 00 .. Name: ENSP00000361965/1-363 Len: 513 Check: 2694 Weight: 1.00 Name: ENSBTAP00000006947/1-363 Len: 513 Check: 4888 Weight: 1.00 Name: ENSTTRP00000012367/1-406 Len: 513 Check: 3575 Weight: 1.00 Name: bmy_08771T0/1-477 Len: 513 Check: 3925 Weight: 1.00 Name: BACU015471/1-376 Len: 513 Check: 6004 Weight: 1.00 // 1 50 ENSP00000361965/1-363 ---------- ---------- ---------- ---------- ---MAQTPAF ENSBTAP00000006947/1-363 ---------- ---------- ---------- ---------- ---MAQTPAF ENSTTRP00000012367/1-406 AGPIKKSLAG RDHCRPPGKQ TGHRPSGPRI FGGGSSAGVH AGTMAQTPVF bmy_08771T0/1-477 ---------- ---------- ---------- -----MMADI IGKALVRILG BACU015471/1-376 ---------- ---------- ---------- ---------- ---MYLRPPQ 51 100 ENSP00000361965/1-363 DKPKVELH-V HLDGSIKPET ILYYGRRRGI ALPANTAEGL LNVIGMDKPL ENSBTAP00000006947/1-363 NKPKVELH-V HLDGAIKPET ILYYGRKRGI ALPADTPEEL QNIIGMDKPL ENSTTRP00000012367/1-406 DKPKVELH-V HLDGAIKPET ILYYGRKRGI TLPADTPEEL QDIIGMDKPL bmy_08771T0/1-477 EVGKVELH-V HLDGAIKPET ILYYGRKRGI ALPANTPEEL QDIIGMDKPL BACU015471/1-376 GVGKVLPRVV HHPHCFVP-- -----RKRGI ALPANTPEEL QDIIGMDKPL 101 150 ENSP00000361965/1-363 TLPDFLAKFD YYMPAIAGCR EAIKRIAYEF VEMKAKEGVV YVEVRYSPHL ENSBTAP00000006947/1-363 SLPEFLAKFD YYMPAIAGCR EAVKRIAYEF VEMKAKDGVV YVEVRYSPHL ENSTTRP00000012367/1-406 SLPGFLAKFA YYMPAIAGCR EAIKRTAYEF VEMKAKEGVV YVEVRYSPHL bmy_08771T0/1-477 SLPGFLAKFD YYMPAIAGCR EAIKRTAYEF VEMKAKEGVV YVEVRYSPHL BACU015471/1-376 SLPGFLAKFD YYMPAIAGCR EAIKRTAYEF VETKAKEGVV YVEVRYSPHL 151 200 ENSP00000361965/1-363 LANSKVEPIP WNQAEGDLTP DEVVALVGQG LQEGERDFGV KARSILCCMR ENSBTAP00000006947/1-363 LANSKVEPIP WNQAEGDLTP DEVVSLVNQG LQEGERDFGV KVRSILCCMR ENSTTRP00000012367/1-406 LANSKVEPIP WNQAEGDLTP DEVVCLVDQG LQDGERDFGV KVRSILCCMR bmy_08771T0/1-477 LANSKVEPIP WNQAEGDLTP DEVVYLVGQG LQEGERDFGV KVRSILCCMR BACU015471/1-376 LANSKVEPIP WNQAEGDLTP DEVVHLVGQG LQDGERDFGV KVRSILCCMR 201 250 ENSP00000361965/1-363 HQPNWSPKVV ELCKKYQQQT VVAIDLAGDE TIPGSSLLPG HVQAYQEAVK ENSBTAP00000006947/1-363 HQPSWSSEVV ELCKKYREQT VVAIDLAGDE TIEGSSLFPG HVQAYAEAVK ENSTTRP00000012367/1-406 HQPSWSPEVV ELCKKYRQQT VVAIDLAGDE TIQGSTLFPE HVQAYAEAVK bmy_08771T0/1-477 HQPSWSPEVV ELCKKYRQQT VVAIDLAGDE TIQGSSLFPE HVKAYAEAVK BACU015471/1-376 HQPSWSPEVV ELCKKYRQQT VVAIDLAGDE TIQGSSLFPE HVKAYAEAMK 251 300 ENSP00000361965/1-363 SGIHRTVHAG EVGSAEVVKE AVDILKTERL GHGYHTLEDQ ALYNRLRQEN ENSBTAP00000006947/1-363 SGVHRTVHAG EVGSANVVKE AVDTLKTERL GHGYHTLEDT TLYNRLRQEN ENSTTRP00000012367/1-406 SGVHRTVHAG EVGSAEVVRE AVDVLKTERL GHGYHTLEDP ALYNRLRQEN bmy_08771T0/1-477 SGIHRTVHAG EVGSAQVVRE AVDTLKTERL GHSYHTLEDP VLYNRLRQEN BACU015471/1-376 SGIHRTVHAG EVGSAQVVRE AVDTLKTERL GHGYHTLEDP VLYNRLRQAN 301 350 ENSP00000361965/1-363 MHFE------ ---------- ---------- ---------- ---------- ENSBTAP00000006947/1-363 MHFE------ ---------- ---------- ---------- ---------- ENSTTRP00000012367/1-406 MHFE------ ---------- ---------- ---------- ---------- bmy_08771T0/1-477 MHFEVRGRGG GGQGGGGKRG GSSRRGERGP QALELLGGGR KPGLTAPGTR BACU015471/1-376 MHFE------ ---------- ---------- ---------- ---------- 351 400 ENSP00000361965/1-363 ---------- ---------- ---------- ---------- -ICPWSSYLT ENSBTAP00000006947/1-363 ---------- ---------- ---------- ---------- -VCPWSSYLT ENSTTRP00000012367/1-406 ---------- ---------- ---------- ---------- -VCPWSSYLT bmy_08771T0/1-477 LRGGRCDQGE NSAGGGGSSW PGDGGQRGPG GFVPATRLLF QVCPWSSYLT BACU015471/1-376 ---------- ---------- ---------- ---------- -VCPWSSYLT 401 450 ENSP00000361965/1-363 GAWKPDTEHA VIRLKNDQAN YSLNTDDPLI FKSTLDTDYQ MTKRDMGFTE ENSBTAP00000006947/1-363 GAWKPDTEHP VVRFKNDQVN YSLNTDDPLI FKSTLDTDYQ MTKNEMGFTE ENSTTRP00000012367/1-406 GTWKPGTEHA VVRFKNDQAN YSLNTDDPLI FKSTLDTDYQ MTKQDMGFTE bmy_08771T0/1-477 GAWKPGTEHA VVRFKNDQAN YSLNTDDPLI FKSTLDTDYQ MTKQDMGFTE BACU015471/1-376 GAWKPGTEHA VVRFKKDQAN YSLNTDDPLI FKSTLDTDYQ MTKQDMGFTE 451 500 ENSP00000361965/1-363 EEFKRLNINA AKSSFLPEDE KRELLDLLYK AYGMPPSASA GQNL------ ENSBTAP00000006947/1-363 EEFKRLNINA AKSSFLPEDE KKELLDLLYK AYGMPSPASA EQ-------- ENSTTRP00000012367/1-406 EEFKRLNINA AKSSFLPEDE KRELLDLLYK AYGMPPLASA GQ-------- bmy_08771T0/1-477 EEFKRLNINA AKSSFLPEDE KRELLDLLYK AYGMPPLASA GMFLTELLGW BACU015471/1-376 EEFKRLNINA AKSSFLPEDE KRELLDLLYK AYGMPPLASA GMFLTELLGW 501 550 ENSP00000361965/1-363 ---------- --- ENSBTAP00000006947/1-363 CL-------- --- ENSTTRP00000012367/1-406 CP-------- --- bmy_08771T0/1-477 CPALAPTWLS GDF BACU015471/1-376 CPALAPTWLS GDF