KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:53 2014 Check: 00 .. Name: ENSP00000428316/1-424 Len: 438 Check: 9331 Weight: 1.00 Name: ENSBTAP00000006956/1-400 Len: 438 Check: 2883 Weight: 1.00 Name: ENSTTRP00000009012/1-420 Len: 438 Check: 4027 Weight: 1.00 Name: bmy_09775T0/1-344 Len: 438 Check: 1781 Weight: 1.00 Name: BACU015788/1-362 Len: 438 Check: 7113 Weight: 1.00 // 1 50 ENSP00000428316/1-424 MPPFLITLFL FHSCCLRANG HLREGMTLLK TEFALHLYQS VAACRNETNF ENSBTAP00000006956/1-400 MQSLLLALLL LPVCSPGGAS NLHEDLTLLR TDLALRLYRS VAAAGNQTNL ENSTTRP00000009012/1-420 MRSVLLALFL LHACPPGGAS DLPEDLTLLR TELALRLYRI VATDGNRTNL bmy_09775T0/1-344 MRSLLLALLL LHAGHPGGAS DLPEDLTLLR TELALRLYRI VATDGNRTNL BACU015788/1-362 MRSLLLALFL LHAGPPGGAS DLPEDLTLLR TELALRLYRI VATDGNRTNL 51 100 ENSP00000428316/1-424 VISPAGVSLP LEILQFGAEG STGQQLADAL GYTVH---DK RVKDFLHAVY ENSBTAP00000006956/1-400 VLSPAGAFIP LELLQFGARG NTGRQLAQAL GYTVH---DP KVREWLQTVY ENSTTRP00000009012/1-420 VLSPAGAFIP LELLQFGAQG NTRRQLVQAL GSMPRAGGKP QVNNSMKKK- bmy_09775T0/1-344 VLSPAGAFIP LELLQFGAQG NTRRQLVQAL GYTVH---DP RVREWLRAVY BACU015788/1-362 VLSPAGAFIP LELLQFGAQG NTRRQLVQAL GYTVH---DP RVREWLRAVY 101 150 ENSP00000428316/1-424 ATLPTSSQGT EMELAC---S LFVQVGTPLS PCFVEHVSWW ANSSLEPADL ENSBTAP00000006956/1-400 AVLPSTNPGA KLELAC---T LYVQTGTPLA PCFVEQVSRW ANSSLELANF ENSTTRP00000009012/1-420 ---STIDYGE KEAISCVSSD LYVHTGMPLA PCFVEQVSRW ANSSLEAANL bmy_09775T0/1-344 AALPSASPGS KLELTC---T LYVQTGMPLA PCFVEQVSRW ANSSLEAANL BACU015788/1-362 AALPSASPGS KLELTC---T LYVQTGMPLA PCFVEQVSRW ANSSLEAANL 151 200 ENSP00000428316/1-424 SEPNSTAIQT SEGASRETAG GGPSEGPGGW P----WEQVS A----AFAQL ENSBTAP00000006956/1-400 REPNSTAMLA NGWGPRQTAG ----DEPVGS A----WERGG GA---ESAQL ENSTTRP00000009012/1-420 REPNGTTILA NGWAPRQTT- ----ETFNSL LQLLCFRD-- -----TRKTL bmy_09775T0/1-344 RETNGTTILA NGWAPRQTTG ----ERLAGS T----WEQGG GGGGVESAQL BACU015788/1-362 REPNGTTILA NGWAPRQTTG ----ERAAGS T----WEQGG GGGGVGSAQL 201 250 ENSP00000428316/1-424 VLVSTMSFQG TWRKRFSSTD TQILPFTCAY GLVLQVPMMH QTTEVNYGQF ENSBTAP00000006956/1-400 VLVSTVSFQS AWRHQFS-SD TQLLPFTCAQ GLTLEVPMMY QMAEVNFGQF ENSTTRP00000009012/1-420 VLVSTVSFQS AWRHRFSFSD TQLLPFTCAQ DVVLQVPMMY QTAEVNYGQF bmy_09775T0/1-344 VLVSTVSFQS AWRHRFSFSD TQLLPFTCAR DVVLQVPMMY QTAEVNYGQF BACU015788/1-362 VLVSTVSFQS AWRHRFSFSD TQLLPFTCAR DVVLQVPMMY QTAEVNYGQF 251 300 ENSP00000428316/1-424 QDTAGHQVGV LELPYLGSAV SLFLVLPRDK DTPLSHIEPH LTASTIHLWT ENSBTAP00000006956/1-400 QDPAGHQVGV LELPYLGNVA SLLLVLPRDR DTPLSHIEPH LTASLLHAWT ENSTTRP00000009012/1-420 QDPAGHQVGV LELPYLGNVA SLLLLLPRDR DTPLSHIEPH LTASILHIWT bmy_09775T0/1-344 QDPAGHQVGV LELPYLGNAA SLLLVLPRDR DTPLSHIEPH LTASILHIWT BACU015788/1-362 QDPAGHQVGV LELPYLGSAA SLLLVLPRDR DTPLSHIEPH LTASILHIWT 301 350 ENSP00000428316/1-424 TSLRRARMDV FLPRFRIQNQ FNLKSILNSW GVTDLFDPLK ANLKGISGQD ENSBTAP00000006956/1-400 ASLKRARMEV FLPRFRIQNH FDLKNILYSW GVIDLFDPLR ANLKGISGQD ENSTTRP00000009012/1-420 SSLKRARMDV LLPRFRIQNH FNLKNILYSW GVTDLFDPLK ANLKGISGQD bmy_09775T0/1-344 SSLKRARMDV FLPRFRIQNH FNLKNILYSW GVTDLFDPLK ANLKGIS--D BACU015788/1-362 SSLKRARMDV FLPRFRIQNH FNLKNILYSW GVTDLFDPLK ANLKGISD-- 351 400 ENSP00000428316/1-424 GFYVSEAIHK AKIEVLEEGT KASGATALLL LKRSRIPIFK ADRPFIYFLR ENSBTAP00000006956/1-400 GFYVSEAIHK AKIEVSEEGT KASAATALLL LKRSRIPIFK ADRPFIFFLR ENSTTRP00000009012/1-420 GVYVSEAIHK AKIEVSEEGT KASAATALLL LKRSRIPIFK ADRPFIFFLR bmy_09775T0/1-344 GILDSNEVTD ---------- ---------- ---------- ---------- BACU015788/1-362 --------NR FGLDFVEEGV FLETTSK--- -HRFRMPPSE ---------- 401 450 ENSP00000428316/1-424 EPNTGITVFF DRIQIIYQCL SSNKGSFVHY PLKNKHSF ENSBTAP00000006956/1-400 EPNTAFVFSI GRV------- ---------- -LNPLH-- ENSTTRP00000009012/1-420 EPNTGITVFF DRSHIIYQHL SSNKASFVH- -PNNKHSF bmy_09775T0/1-344 ---------- ---------- ---------- -------- BACU015788/1-362 ---------- ---------- ---------- --------