KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:55 2014 Check: 00 .. Name: ENSP00000321656/1-473 Len: 496 Check: 836 Weight: 1.00 Name: ENSBTAP00000006968/1-477 Len: 496 Check: 3282 Weight: 1.00 Name: ENSTTRP00000005146/1-475 Len: 496 Check: 7254 Weight: 1.00 Name: bmy_12149T0/1-245 Len: 496 Check: 4427 Weight: 1.00 Name: BACU004104/1-388 Len: 496 Check: 5513 Weight: 1.00 // 1 50 ENSP00000321656/1-473 MSTELFSSTR EEGSSGSGPS FRSNQRKMLN LLLERDTSFT VCPDVPRTPV ENSBTAP00000006968/1-477 MSAEFFSSKR EEGSLASGPS FRSNQRKILN LLLERDASFS ISSDLPTTPV ENSTTRP00000005146/1-475 MSAEFFSSTR EEGSLDSGPS FRSNQRKILN LLLERDTSFS ISSDIPRTPV bmy_12149T0/1-245 ---------- ---------- ---------- ---------- ---------- BACU004104/1-388 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000321656/1-473 G-KFLGDSAN LSILSGGTPK RCLDLSNLSS GEITATQLTT SADLDETGHL ENSBTAP00000006968/1-477 EKKLFGDSAN LSILSGGTPK RCLDLSNLSS GEMSATQLTA SADLDETGHL ENSTTRP00000005146/1-475 EKKLFGDSAN LSIKSGETPK RCLNLSNLSS GEMSATQFTT SSDLDETGHL bmy_12149T0/1-245 ---------- ---------- ---------- ---------- ---------- BACU004104/1-388 ---------- ---------- ---------- --MSATQFTT SSDLDETANV 101 150 ENSP00000321656/1-473 DSSGLQEVHL AGMNHDQHLM KCSPAQLLCS TPNGLDRGHR KRDAMCSSSA ENSBTAP00000006968/1-477 ESTGPEQVRL AGMNYRQHLI KCSPAQLFCS TPNALEHGRR KKDAICGSSA ENSTTRP00000005146/1-475 DSTGPEEXXX XXXNYHQHLV KCSPAQLLCS TPNALDHGHR KKDAICSSST bmy_12149T0/1-245 ---------- ---------- ---------- ---------- ---------- BACU004104/1-388 VFLMQENSTS EPLEWWVPRN LRSPLFLL-- ---------- ---------- 151 200 ENSP00000321656/1-473 NKENDNGNLV DSEMKYLGSP ITTVPKLDKN PNLGEDQAEE ISDELMEFSL ENSBTAP00000006968/1-477 NKENDNGNLV ENEMKHLGSP ITTVSKLHKN PELAEDQAEE ISDELMEFSL ENSTTRP00000005146/1-475 NKENDNGNLV ESEMKHLDSP ITTVSKLDKT PELGENQTEE ISDELMEFSL bmy_12149T0/1-245 ---------- ---------- ---------- ---------- ---------- BACU004104/1-388 ----DNGNVV ESEMKHLDSP ITTVSKLDKN PELGENQTEE ISYELMEFSL 201 250 ENSP00000321656/1-473 KDQE---AKV SRSGLYRSPS MPENLNRPRL KQVEKFKDNT IPDKVKKKYF ENSBTAP00000006968/1-477 EDQEKAKPPL NWSSLYRSSS LPDSLNSPSL KQVVKFKDST IPDKLKKKYC ENSTTRP00000005146/1-475 EDQEEAKASV NRSCLYRSSS LPDSLNSPGL KQMVKFKDNT IPDKVKKKYC bmy_12149T0/1-245 ---------- ---------- ---------- --MVKFKDNT IPDKVKKKYC BACU004104/1-388 EDQEEAKASV NRSCLYRSSS LPDSLNSPRL KQMVKFKDNT IPDKVKKKYC 251 300 ENSP00000321656/1-473 SGQGKLRKGL CLKKTVSLCD ITITQMLEED SNQGHLIGDF SKVCALPTVS ENSBTAP00000006968/1-477 SNQKELGKGL GLKKMVSLCD INMTQMLEED SNQGPLIGDF SKVCALPTVS ENSTTRP00000005146/1-475 SSHKELRKGL GIKKMVSLCD INMTQMLEED SNQ-PLIGDF SKVCALP-VS bmy_12149T0/1-245 SSHKELRKGL GIKKMVSLCD INMAQMLEED SNQGPLIGDF SKVCALPTVS BACU004104/1-388 SSHKELRKGL GIKKMASLCD INMTQMLEED SNQGPLIGDF SKVCALPTVS 301 350 ENSP00000321656/1-473 GKHQDLKYVN PET------- VAALLSGKFQ GLIEKFYVID CRYPYEYLGG ENSBTAP00000006968/1-477 GKHQDLKYVN PET------- VAALLSGEFQ GLIEKFYIID CRYPYEYLGG ENSTTRP00000005146/1-475 GRHQDLKYVN PET------- VAALLLGKFQ GLIEIFYIID CRYPYEYLGG bmy_12149T0/1-245 GRHQDLKYVN PET------- VAALLLGKFQ GLIEKFYIID CRYPYEFLGG BACU004104/1-388 GRHQDLKYVN PETVSRFLEM VAALLLGKFQ GLIEKFYIID CRYPYEYLGG 351 400 ENSP00000321656/1-473 HI-------- ----QGALNL YSQEELFNFF LKKPIVPLDT QKRIIIVFHC ENSBTAP00000006968/1-477 HI-------- ----QGALNL HSQEELYNFF LKKPIVPWDN QKRIVIVFHC ENSTTRP00000005146/1-475 HI-------- ----QGALNL YSQEELYNFF LKKPIVPLDT QKRIIIVFHC bmy_12149T0/1-245 HI-------- ----QGALNL YSQEELYNFF LKKPIVPLDT QKRIIIVFHC BACU004104/1-388 HIQILKEILN KILLQGALNL YSQEELYNFF LKKPIVPLDT QKRIIIVFHC 401 450 ENSP00000321656/1-473 EFSSERGPRM CRCLREEDRS LNQYPALYYP ELYILKGGYR DFFPEYMELC ENSBTAP00000006968/1-477 EFSSERGPRM CRSLREEDRT LNQYPALYYP ELYILKGGYR DFFPEYMELC ENSTTRP00000005146/1-475 EFSSERGPRM YRSLRQEDRA VNQYPALYYP ELYILKGGYR DFFPEYMELC bmy_12149T0/1-245 EFSSERGPRM YRSLRQEDRA VNQYPALYYP ELYILKGGYR DFFPEYMELC BACU004104/1-388 EFSSERGPRM YRSLRQEDRA VNQYPALYYP ELYILKGGYR DFFPEYMELC 451 500 ENSP00000321656/1-473 EPQSYCPMHH QDHKTELLRC RSQSKVQEGE RQLREQIALL VKDMSP ENSBTAP00000006968/1-477 EPQSYCPMHH QDHKAELLRC RNQSKAWEGE RQLQEQIALL VKDVSP ENSTTRP00000005146/1-475 EPQSYCPMHH QDHKTELLRC RNQSKAWEGE RQLQEQIALL VKDVSP bmy_12149T0/1-245 EPQSYCPMHH QDHKAELLRC RNQSKAWEGE RQLQEQIALL VKDVSP BACU004104/1-388 EPQSYCPMHH QDHKAELLRC RNQSKAWEGE RQLQEQIALL VKDVSP