KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:55 2014 Check: 00 .. Name: BACU008772/1-221 Len: 302 Check: 1550 Weight: 1.00 Name: ENSTTRP00000001239/1-284 Len: 302 Check: 6541 Weight: 1.00 Name: ENSP00000366156/1-302 Len: 302 Check: 4101 Weight: 1.00 Name: bmy_20129T0/1-264 Len: 302 Check: 7199 Weight: 1.00 Name: ENSBTAP00000006978/1-302 Len: 302 Check: 2742 Weight: 1.00 // 1 50 BACU008772/1-221 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001239/1-284 KEPSIKEPAT SGHNAIREGW CRETCSAGVG QALSQQVEQL LRHRRSSYQD ENSP00000366156/1-302 MEPGPDGPAA SGPAAIREGW FRETCSLWPG QALSLQVEQL LHHRRSRYQD bmy_20129T0/1-264 MEPGLDGPSA SGPAAIREGW FRETCSLWPG QALSLQVEQL LHHRRSRYQD ENSBTAP00000006978/1-302 MEPGPDGPAA PGPAAIREGW FRETCSLWPG QALSLQVEQL LHHQRSRYQD 51 100 BACU008772/1-221 ---------- ---------- ---------- -MIANLPLCS HPNPRKVLIV ENSTTRP00000001239/1-284 IFVIRSKSYG NVLVLDGVIQ CTERDEFSYQ EMIANLPLYS HPNPRKVLII ENSP00000366156/1-302 ILVFRSKTYG NVLVLDGVIQ CTERDEFSYQ EMIANLPLCS HPNPRKVLII bmy_20129T0/1-264 ILVFRSKSYG NVLVLDGVIQ CTERDEFSYQ EMIANLPLYS HPNPR----- ENSBTAP00000006978/1-302 ILVFRSKSYG NVLVLDGVIQ CTERDEFSYQ EMIANLPLCS HPNPRKVLII 101 150 BACU008772/1-221 GGGDGGVLRQ VVKHSSVESV VQCEIDEDVV QVSKKFLPGM AVGYSSSKLI ENSTTRP00000001239/1-284 GGGDGGVLRE VVKHSSVESV VQCEIDEDVI QVSKKFLPGM AIGYSSSKLT ENSP00000366156/1-302 GGGDGGVLRE VVKHPSVESV VQCEIDEDVI QVSKKFLPGM AIGYSSSKLT bmy_20129T0/1-264 ---------- ---------- ---------- ---KKFLPGM AIGYSSSKLT ENSBTAP00000006978/1-302 GGGDGGVLRE VVKHSSVEAV VQCSPPQDVI QVSKKFLPSM AVGYSSSKLT 151 200 BACU008772/1-221 LRVDNGFEFM KQNQDAFAVI ITDSSDPLGP AESLFKDSCY RLMKTALKEG ENSTTRP00000001239/1-284 LHVGDGFEFM KQNQNAFDVI ITDSS-LMGP AESLFKESYY QLMKTALKED ENSP00000366156/1-302 LHVGDGFEFM KQNQDAFDVI ITDSSDPMGP AESLFKESYY QLMKTALKED bmy_20129T0/1-264 LHVGDGFEFM KQNQDAFDVI ITDSSDPMGP AESLFKESYY QLMKTALKED ENSBTAP00000006978/1-302 LHVGDGFEFM KQNQDAFDVI ITDSSDPMGP AESLFKESYY QLMKTALKED 201 250 BACU008772/1-221 GILCCQGERQ WLHLDLIKVM RQFCKSLFLV VGYAYCTIPT YPSCQTGFIL ENSTTRP00000001239/1-284 GILCCQGECQ WLHLDLIKEM RHFCKSLFPV VDYAYCTIPT YPSGQIGFML ENSP00000366156/1-302 GVLCCQGECQ WLHLDLIKEM RQFCQSLFPV VAYAYCTIPT YPSGQIGFML bmy_20129T0/1-264 GILCCQGECQ WLHLDLIKEM RHFCKSLFPV VDYAYCTIPT YPSGQIGFML ENSBTAP00000006978/1-302 GILCCQGECQ WLHLDLIKEM RHFCKSLFPV VDYAYCTIPT YPSGQIGFML 251 300 BACU008772/1-221 CSKNPSTNFL EPVQQLTQKQ VEQMQLKYYN SDVHRAPFVL PEFARKAVND ENSTTRP00000001239/1-284 CSKNPSTNFR EPVQQLTQK- VEEMQL-YYN SDVHQAA--- ---------- ENSP00000366156/1-302 CSKNPSTNFQ EPVQPLTQQQ VAQMQLKYYN SDVHRAAFVL PEFARKALND bmy_20129T0/1-264 CSKNPSTNFR EPVQQLTQKQ VEEMQLKYYN SDVHQAAFVL PEFARKALND ENSBTAP00000006978/1-302 CSKNPSTNFR EPLQPLMQKQ VEEMQLKYYN SDVHRAAFVL PEFARKALND 301 350 BACU008772/1-221 VC ENSTTRP00000001239/1-284 -- ENSP00000366156/1-302 VS bmy_20129T0/1-264 VR ENSBTAP00000006978/1-302 VS